TCONS_00037739-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00037739-protein
Unique NameTCONS_00037739-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00037739-protein ID=TCONS_00037739-protein|Name=TCONS_00037739-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
MTKTCKELLATEGKLLTLFMILSISGNVIMVSGVLQEITIGFLHPGFSKA
FKLNNIKGGLVKVLDDINNRDTILNGIRLNVKLADSGCDESMAIGSAVDL
YNAGGKAMIGLACSVCCLSAGLLSTSKQIPLISYSCSSIELSNKDNYPYF
ARTKPFARTGPWATRALAAITKRMNWRQVCIIERVHEIYTLVSENLREEF
LSQNYTVYRERFYYEDTTFQEKEEYLASLQDRCRGDVTLSLAKLPSPAKT
AKQCNLDMLETSARASIFKIKKCRGWWPFQVNPEDDDDPDPVLAGKVEAE
IELLAKEDAEANPVGKKREEPQPLE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_022470XLOC_022470Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00037739TCONS_00037739Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001828ANF_lig-bd_rcpt
IPR032362Ferlin_C
IPR028082Peripla_BP_I
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 34..309
e-value: 4.9E-31
score: 107.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..325
IPR001828Receptor, ligand binding regionPFAMPF01094ANF_receptorcoord: 64..222
e-value: 1.1E-25
score: 90.4
IPR032362Ferlin, C-terminal domainPFAMPF16165Ferlin_Ccoord: 292..325
e-value: 3.8E-7
score: 30.1
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 37..232

Blast
[Close]
BLAST of TCONS_00037739-protein vs. Swiss-Prot (Human)
Match: OTOF (Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.462e-17
Identity = 46/98 (46.94%), Postives = 56/98 (57.14%), Query Frame = 0 
Query:  231 DRCRGDVTLSLAKLPSPAKTAKQCNLDMLETSARA---SIFKIKKCRGWWPFQVNPEDDDDPDPVLAGKVEAEIELLAKEDAEANPVGKKREEPQPLE 325
            D   G + L L + P  AKTAKQC ++M          SIFK K+ +GWWP     E+D+     L GKVEAE+ LL  E+AE NPVG  R EP PLE
Sbjct: 1841 DDFLGAIELDLNRFPRGAKTAKQCTMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFE---LTGKVEAELHLLTAEEAEKNPVGLARNEPDPLE 1935
The following BLAST results are available for this feature:
BLAST of TCONS_00037739-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OTOF2.462e-1746.94Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3[more]
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