XLOC_022044 (gene) - C. hemisphaerica

Overview
NameXLOC_022044
Unique NameXLOC_022044
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001595:38903..44174+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022044 ID=XLOC_022044|Name=XLOC_022044|organism=Clytia hemisphaerica|type=gene|length=5272bp|location=Sequence derived from alignment at sc0001595:38903..44174+ (Clytia hemisphaerica)
AAATTGGCATTGTTAAGAAGCTCTCATTCAGATCTCTCAAGCAGGTATAa gcagtagcggcctggcttaaatttcttggtggtgcaaattatgaaattgg cgcccctggcgtttttgtccttatttgcaccctccatcattaagtgaaaa tattaaactgtaagagcagtgactggttgaaagtaacgcccctaatcttt gaaatggaaattttatacctgGTAAGTCGATTTAGTCTACATTTCTGCTT TCTAAAACTCTTATCAGAAAAATTGCCAGATAATATTTAAACTTTCGCAA CTCTctattaaagatcaatggctgaaagaggccccaaaaattcagAAGTT GGGAGGAAGGGTTCCTTGTTATtgtggcgccgcaggcaaaaaaatttggt gtaagaaaggtcaaacagcttaaggGATCTTCTAAAACGGAGAAAGTTAG NATtgtggcgccgcaggcaaaaaattttggtgtaagaaaggtcaaacagc ttaagagatcttctaaaacggagaaagttagtcagtatAAGACCACAAAA CCACAGCAAgaatcaacaagttttgatcattttggcaatctctcattttg ggggtgagcattctctttaaccccgatggatacacaacacttctctacTT CGGATTCAATATTGatagaagttttgaaaaaattcaagagagGAAGGATG CAAAAGGGTAAAataaagcgccgcaggcgaaaaaagtTAACATTGTACTC ATAAAAGGCGCTATAAACGTGCCGAAGGGCGCCAAattgcccaattaaac atcaacaaaattttggcgccccccttaaaaagctcttttggcgcccctat cagatctttctgggtggtgcactgcacaccctgcaccccctgccaggccg ccactgggTATAAGCTGTTTTGTGTGGTGTTggcaaatgaaaataaattt ttaatgtttttgtgaccagaaaaaagttgtaaattAATATAGAAAAATTT ACCTTACATTCTTTTCTTTTACCTTTGGACAATTTTTAGAACCTGGCGTC AGAGATTCACTTCACAAACCTACTCTGAAAACAGAGCAAGTCTACAGGGA TGTATATGATGGGCAATCCTACCAAGAACTCATTCGACTTGGATATTTCA ACAAAGAATTGAGCCTAACATGTCAAATGAACACTGATGGCGTCAGCCTC TTCAATAGTAGTTCTTTTTCAGTATGGCCAGTTTATCTGCGTATCAATGA ACTGCCACCTAAAATGAGGTATATAATAAGTATACTTTTAAAGGGATAGC CAGATTATCATGAAATTCAAAGAGCCCATAGATTTCTTCTATAGTCCAAA TTTTACGGTGTAATTGTTTTTTAAAGGAACGATATTTAGGtttgtatttt ttaaatctGCTTGATAAAAACAATAGTGAGGTAGGTAGTGGCAGTGCGTA TATCCAGAAGAGAAGCTCAAGCAGAATGAAGGAGATATGCCGTAGCCTAG AATTTGTTTTGCTCaataagaaaatcttttgtgtacAAGATTATTAATAg ataaattttcaacatttataATGAAAGGTAAATATTATTTGTTTAGGAAA TCAAAAAAGTACAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCC TTACATGAGGACATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCA CATTTGAAGGTTTACTCCTATTTAGCTTTATATGAATTATACCTTAATAA AAGTACTATTTTTGCGCGTActaatttttgttcaatttcgcGCAGAGGCT TGGAAATGTACAAAATTTAATACACTAATACCAAAATTATGTGCAATGCT AAGGTGTACAactaaatcttttcaaaattttcctaaaaatatcATGAAAC CAAGTCACAAGATATTGAGCTTTGTTATCATAATAAGATTTCATACTCAG AGTTTCAGCCCCTACATATTGATTGCATAATTCTGTTTATATCAAGTATT GTCCTCTCACACAGGTAATTATGGTAAAAGTTTGAGTATGTACTGTCATT CTCTTAGGGTTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGG GAAGATGGCAATAACTGGTGGACTGTTCGATCTACCAGGTGAATTTGTAT ATATTATTCTGTGGATTACTCTTTTTTGCCTAATGGAACATGAGTGTAAA AATCAGAATACCAGTTCTTGTATTATTTTTAAAcaagatttattaaaatt taaaatagtgaTCTTATGAATTTTAAGAACCCTTCAACCGAAAAAAGTGC TTCCAGAAGTTCTTTTTAGGTTTCAGATATCAAACTTAATTTTATAATAT AAATCAAATGAAACTGGAATTTCTCTTAGCAAAATGTTTGGTTCAAGAAA CGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAATTGAGGGA GAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATCAAGAACA AAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTAGAAACAA ATGAAACAGTTAGTATTGTTTTTTGTCTGTTTGGGAAAAAATGTGTCATC ACAAGCGATTTTAAATACAAATGGTTTGGAACGTTCCaaagaaaaacaat gaaataaacgTTCTGGAACGTTCCAGAGGGGTAAACATTGATAGTTGGCA GAAATCAATATTTAGCAAACTGTTGACAATTTCATTTaagatcgaagttt tttttttcaaaaaattctcacTTTACCGTCTGAAGACCCTTTTGGCTCCG AAATTGTTTTGATTGTATTTTTGCACTTtgatccaattttgaacttttcg aatttcgaatAATACAATATATAATCTgttctgccacccaaatctcctga tagaagatagttggacagaaattctttgaatttcagGTTTTTGGTATACG TGGATACTCGATCCTTGGTGAACTGCCATTTATTGATATAATTTGGAATA TACCGTACGACTATATGCATGGCATATTTCAAGGTGTAGCGAAGTAAGTG ATTTTGAATTCTGACCGATGCAATTACTTTTAACTTAGATTGGATAATGa ttataagaaaatataaaatttttgaataattgcTGTTTTCTTTCAAGTAA AGACAATGGATCACATAAAAATTATTTGAGAGCAAAGATTTTGTGTTTAT TACCTATTTGTGTCATGCCAAACCATTTCAATATACTTCACATGTGCTCT TACACTGATTAGTACTGGTggtgtatttattttttctactgGTGCTGAAA CTGGTAGCTGAAAGATGTAAACCTGTAGACACTGGTAGCACACTGATGGG GACTGGTTTAAGCACTGTTGTACAATTTTAATTTGAGAGAAATCACTTGG TATATGACATAATTTGGCGTTTTTATGCATAGAGAGTTCTTATTATTTCG TTTAGATCACTAAATAGGTTATGGTTTGACTCTGCACACTCAAAAGAACC ATGGTATCTTGGCAAGGACGTTCATATTATTGATAAGGCACTGCTTTCAT TGAGACCACCTGATGAAGTCACCAGACTGCCACGAAGTTTGGTCGCACAT CGcaattattttaaaggtattttgtAACCCAAAAAACTCATTTCATCTTG TTGACATTTTTTTATGATTGATTCAAATCGAAAAGTATGTAATTTTTATA AGTTTTCGCATAGGTGAAATGAAAACCCATTTAGACAATCTATTGCAGGG CTCCTAGACGTCCTAATTTTACTAAATGTACTAATCTtggagaaatttga aaaaagtcctgTTTTTCCTAATTACTGAGTACTTTTTCCTATATTATCAT ATTTTGTCCTCATACTACAATTTTCTTTGAATCTTCCTCAAAATTCATTT GAAAGGTAGCTTGAAATGGCAGTTTTTGCATCTCACAAGTCCAGTTGATG ATCCAACAATATAACATTCGTTTTTTTCTCTTTAGCAAATGAGTGTCGAA ATTGGATGTTCTACTATGCCCCTATGATCTTNattctggtctgtaaaata tttaggtaccccacaacctagcccaattggctaccccaattggctaccct gctttttagaccaacccgatTTTGTGTTTATTACCTATTTGTGTCATGCC AAACCATTTCAATATACTTAACATGTGCTCTTACACTGATTAGCACTGGT ggtgtatttattttttctattggtGCTGAAACTGGTAGCTGAAAGATGTA AACCTGTAGACACTGGTAGTACACTGATGGGGACTGGTTTAAGCACTGTT GTACAATTTTAATTTGAGAGAAATCACTTGGTATATGACANGACACTGGT AGTACACTGATGGGGACTGGTTTAAGCACTGTTGTACAATTTTAATTTGA GAGAAATCACTTGGTATATGACATAATTTGGCGTTTTTATGCATAGAGAG TTCTTATTATTTCGTTTAGATCACTAAATAGGTTATGGTTTGACTCTGCA CACTCAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGATAA GGCACTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCACGAA GTTTGGTCGCACATCGcaattattttaaaggtattttgtAACCCAAAAAA CTCATTTCATCTTGTTGACATTTTTTTATGATTGATTCAAATCGAAAAGT ATGTAATTTTTATAAGTTTTCGCATAGGTGAAATGAAAACCCATTTAGAC AATCTATGGCAGTTTTTGCATCTCACAAGTCAAAAATTATTCTCAGCCAG TTGATGATCCAACAATATAACATTCGTTTTTTTCTCTTTAGCAAATGAGT GTCGAAATTGGATGTTCTACTATGCCCCTATGATCTTAAATGGAATTTTG CCAGATCCTTACTTTAGGTAAGAACACACTGATTTCGAATTAGTTTTTTG CGTAATAGCTTTTGTACCTAATAAGCGTCCTCCTCTAATTAATTTCTTTG CCCAAGTTGAATCACACGATCCTATACACAATACTTTATTTCCTTTCTTA GCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaaaagaagaa attactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAAAGATTTGC AGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTATTCATTGTA AATGgggtttaaaaattttgaaactttataACAGAGGTTAGTTTTATTGA ATGAGGGCTTTGATTTTGGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037244TCONS_00037244Clytia hemisphaericatranscript
TCONS_00037245TCONS_00037245Clytia hemisphaericatranscript
TCONS_00037246TCONS_00037246Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037244-proteinTCONS_00037244-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001595supercontigsc0001595:38903..44174 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.06 0.12 4.14 3.91 3.36 4 1.9 1.67 0.7 0.87 2.39 2.25 0.06 0 0 0.04 0 0.11 0.04 0 0.11 0.04 3.25 3.96 0 0.14 0 0