TCONS_00037244 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037244
Unique NameTCONS_00037244
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1211

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037244 ID=TCONS_00037244|Name=TCONS_00037244|organism=Clytia hemisphaerica|type=transcript|length=1211bp
AAATTGGCATTGTTAAGAAGCTCTCATTCAGATCTCTCAAGCAGAACCTG
GCGTCAGAGATTCACTTCACAAACCTACTCTGAAAACAGAGCAAGTCTAC
AGGGATGTATATGATGGGCAATCCTACCAAGAACTCATTCGACTTGGATA
TTTCAACAAAGAATTGAGCCTAACATGTCAAATGAACACTGATGGCGTCA
GCCTCTTCAATAGTAGTTCTTTTTCAGTATGGCCAGTTTATCTGCGTATC
AATGAACTGCCACCTAAAATGAGGAAATCAAAAAAGTACAGAATCTTTGC
TGGGCTCTGGTTTGGTTATAACAAGCCTTACATGAGGACATTTTTGCGAC
CATTAGTTGAGGAAATGAAGAAGCTCACATTTGAAGGGTTTTCAATGATT
GAGGAAGAAAGTGGCAAAAAAATGGAGGGGAAGATGGCAATAACTGGTGG
ACTGTTCGATCTACCAGCAAAATGTTTGGTTCAAGAAACGGTTCAGTTCA
ACGGCTACCATGGTTGCAGCTGCTGTGAAATTGAGGGAGAGGCTGTGGCT
TCAAATGTAGTTTTTCCTTTCGTTGAAAATCAAGAACAAAGAAGTCAACT
GAGAACACTTGGACAAGCTATGCTTGCTTTAGAAACAAATGAAACAGTTT
TTGGTATACGTGGATACTCGATCCTTGGTGAACTGCCATTTATTGATATA
ATTTGGAATATACCGTACGACTATATGCATGGCATATTTCAAGGTGTAGC
GAAATCACTAAATAGGTTATGGTTTGACTCTGCACACTCAAAAGAACCAT
GGTATCTTGGCAAGGACGTTCATATTATTGATAAGGCACTGCTTTCATTG
AGACCACCTGATGAAGTCACCAGACTGCCACGAAGTTTGGTCGCACATCG
caattattttaaagCAAATGAGTGTCGAAATTGGATGTTCTACTATGCCC
CTATGATCTTAAATGGAATTTTGCCAGATCCTTACTTTAGCCATTTTCTC
CTTGTTGTAAATGGAATATTCATacttcaaaaagaagaaattactGAAAC
CGAGTTGGAATTTGCAGAAAAATGTCTCAAAAGATTTGCAGTAGACATGA
AGGAAGTTTATGGTATTAATGTTTTCAGTATTCATTGTAAATGgggttta
aaaattttgaaactttataACAGAGGTTAGTTTTATTGAATGAGGGCTTT
GATTTTGGAAG
Run BLAST on NCBI

protein sequence of TCONS_00037244-protein

>TCONS_00037244-protein ID=TCONS_00037244-protein|Name=TCONS_00037244-protein|organism=Clytia hemisphaerica|type=polypeptide|length=332bp
MNTDGVSLFNSSSFSVWPVYLRINELPPKMRKSKKYRIFAGLWFGYNKPY
MRTFLRPLVEEMKKLTFEGFSMIEEESGKKMEGKMAITGGLFDLPAKCLV
QETVQFNGYHGCSCCEIEGEAVASNVVFPFVENQEQRSQLRTLGQAMLAL
ETNETVFGIRGYSILGELPFIDIIWNIPYDYMHGIFQGVAKSLNRLWFDS
AHSKEPWYLGKDVHIIDKALLSLRPPDEVTRLPRSLVAHRNYFKANECRN
WMFYYAPMILNGILPDPYFSHFLLVVNGIFILQKEEITETELEFAEKCLK
RFAVDMKEVYGINVFSIHCKWGLKILKLYNRG
Run BLAST on NCBI

transcript from alignment at sc0001595:38903..44174+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037244 ID=TCONS_00037244|Name=TCONS_00037244|organism=Clytia hemisphaerica|type=transcript|length=5272bp|location=Sequence derived from alignment at sc0001595:38903..44174+ (Clytia hemisphaerica)
AAATTGGCATTGTTAAGAAGCTCTCATTCAGATCTCTCAAGCAGGTATAa
gcagtagcggcctggcttaaatttcttggtggtgcaaattatgaaattgg
cgcccctggcgtttttgtccttatttgcaccctccatcattaagtgaaaa
tattaaactgtaagagcagtgactggttgaaagtaacgcccctaatcttt
gaaatggaaattttatacctgGTAAGTCGATTTAGTCTACATTTCTGCTT
TCTAAAACTCTTATCAGAAAAATTGCCAGATAATATTTAAACTTTCGCAA
CTCTctattaaagatcaatggctgaaagaggccccaaaaattcagAAGTT
GGGAGGAAGGGTTCCTTGTTATtgtggcgccgcaggcaaaaaaatttggt
gtaagaaaggtcaaacagcttaaggGATCTTCTAAAACGGAGAAAGTTAG
NATtgtggcgccgcaggcaaaaaattttggtgtaagaaaggtcaaacagc
ttaagagatcttctaaaacggagaaagttagtcagtatAAGACCACAAAA
CCACAGCAAgaatcaacaagttttgatcattttggcaatctctcattttg
ggggtgagcattctctttaaccccgatggatacacaacacttctctacTT
CGGATTCAATATTGatagaagttttgaaaaaattcaagagagGAAGGATG
CAAAAGGGTAAAataaagcgccgcaggcgaaaaaagtTAACATTGTACTC
ATAAAAGGCGCTATAAACGTGCCGAAGGGCGCCAAattgcccaattaaac
atcaacaaaattttggcgccccccttaaaaagctcttttggcgcccctat
cagatctttctgggtggtgcactgcacaccctgcaccccctgccaggccg
ccactgggTATAAGCTGTTTTGTGTGGTGTTggcaaatgaaaataaattt
ttaatgtttttgtgaccagaaaaaagttgtaaattAATATAGAAAAATTT
ACCTTACATTCTTTTCTTTTACCTTTGGACAATTTTTAGAACCTGGCGTC
AGAGATTCACTTCACAAACCTACTCTGAAAACAGAGCAAGTCTACAGGGA
TGTATATGATGGGCAATCCTACCAAGAACTCATTCGACTTGGATATTTCA
ACAAAGAATTGAGCCTAACATGTCAAATGAACACTGATGGCGTCAGCCTC
TTCAATAGTAGTTCTTTTTCAGTATGGCCAGTTTATCTGCGTATCAATGA
ACTGCCACCTAAAATGAGGTATATAATAAGTATACTTTTAAAGGGATAGC
CAGATTATCATGAAATTCAAAGAGCCCATAGATTTCTTCTATAGTCCAAA
TTTTACGGTGTAATTGTTTTTTAAAGGAACGATATTTAGGtttgtatttt
ttaaatctGCTTGATAAAAACAATAGTGAGGTAGGTAGTGGCAGTGCGTA
TATCCAGAAGAGAAGCTCAAGCAGAATGAAGGAGATATGCCGTAGCCTAG
AATTTGTTTTGCTCaataagaaaatcttttgtgtacAAGATTATTAATAg
ataaattttcaacatttataATGAAAGGTAAATATTATTTGTTTAGGAAA
TCAAAAAAGTACAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCC
TTACATGAGGACATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCA
CATTTGAAGGTTTACTCCTATTTAGCTTTATATGAATTATACCTTAATAA
AAGTACTATTTTTGCGCGTActaatttttgttcaatttcgcGCAGAGGCT
TGGAAATGTACAAAATTTAATACACTAATACCAAAATTATGTGCAATGCT
AAGGTGTACAactaaatcttttcaaaattttcctaaaaatatcATGAAAC
CAAGTCACAAGATATTGAGCTTTGTTATCATAATAAGATTTCATACTCAG
AGTTTCAGCCCCTACATATTGATTGCATAATTCTGTTTATATCAAGTATT
GTCCTCTCACACAGGTAATTATGGTAAAAGTTTGAGTATGTACTGTCATT
CTCTTAGGGTTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGG
GAAGATGGCAATAACTGGTGGACTGTTCGATCTACCAGGTGAATTTGTAT
ATATTATTCTGTGGATTACTCTTTTTTGCCTAATGGAACATGAGTGTAAA
AATCAGAATACCAGTTCTTGTATTATTTTTAAAcaagatttattaaaatt
taaaatagtgaTCTTATGAATTTTAAGAACCCTTCAACCGAAAAAAGTGC
TTCCAGAAGTTCTTTTTAGGTTTCAGATATCAAACTTAATTTTATAATAT
AAATCAAATGAAACTGGAATTTCTCTTAGCAAAATGTTTGGTTCAAGAAA
CGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAATTGAGGGA
GAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATCAAGAACA
AAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTAGAAACAA
ATGAAACAGTTAGTATTGTTTTTTGTCTGTTTGGGAAAAAATGTGTCATC
ACAAGCGATTTTAAATACAAATGGTTTGGAACGTTCCaaagaaaaacaat
gaaataaacgTTCTGGAACGTTCCAGAGGGGTAAACATTGATAGTTGGCA
GAAATCAATATTTAGCAAACTGTTGACAATTTCATTTaagatcgaagttt
tttttttcaaaaaattctcacTTTACCGTCTGAAGACCCTTTTGGCTCCG
AAATTGTTTTGATTGTATTTTTGCACTTtgatccaattttgaacttttcg
aatttcgaatAATACAATATATAATCTgttctgccacccaaatctcctga
tagaagatagttggacagaaattctttgaatttcagGTTTTTGGTATACG
TGGATACTCGATCCTTGGTGAACTGCCATTTATTGATATAATTTGGAATA
TACCGTACGACTATATGCATGGCATATTTCAAGGTGTAGCGAAGTAAGTG
ATTTTGAATTCTGACCGATGCAATTACTTTTAACTTAGATTGGATAATGa
ttataagaaaatataaaatttttgaataattgcTGTTTTCTTTCAAGTAA
AGACAATGGATCACATAAAAATTATTTGAGAGCAAAGATTTTGTGTTTAT
TACCTATTTGTGTCATGCCAAACCATTTCAATATACTTCACATGTGCTCT
TACACTGATTAGTACTGGTggtgtatttattttttctactgGTGCTGAAA
CTGGTAGCTGAAAGATGTAAACCTGTAGACACTGGTAGCACACTGATGGG
GACTGGTTTAAGCACTGTTGTACAATTTTAATTTGAGAGAAATCACTTGG
TATATGACATAATTTGGCGTTTTTATGCATAGAGAGTTCTTATTATTTCG
TTTAGATCACTAAATAGGTTATGGTTTGACTCTGCACACTCAAAAGAACC
ATGGTATCTTGGCAAGGACGTTCATATTATTGATAAGGCACTGCTTTCAT
TGAGACCACCTGATGAAGTCACCAGACTGCCACGAAGTTTGGTCGCACAT
CGcaattattttaaaggtattttgtAACCCAAAAAACTCATTTCATCTTG
TTGACATTTTTTTATGATTGATTCAAATCGAAAAGTATGTAATTTTTATA
AGTTTTCGCATAGGTGAAATGAAAACCCATTTAGACAATCTATTGCAGGG
CTCCTAGACGTCCTAATTTTACTAAATGTACTAATCTtggagaaatttga
aaaaagtcctgTTTTTCCTAATTACTGAGTACTTTTTCCTATATTATCAT
ATTTTGTCCTCATACTACAATTTTCTTTGAATCTTCCTCAAAATTCATTT
GAAAGGTAGCTTGAAATGGCAGTTTTTGCATCTCACAAGTCCAGTTGATG
ATCCAACAATATAACATTCGTTTTTTTCTCTTTAGCAAATGAGTGTCGAA
ATTGGATGTTCTACTATGCCCCTATGATCTTNattctggtctgtaaaata
tttaggtaccccacaacctagcccaattggctaccccaattggctaccct
gctttttagaccaacccgatTTTGTGTTTATTACCTATTTGTGTCATGCC
AAACCATTTCAATATACTTAACATGTGCTCTTACACTGATTAGCACTGGT
ggtgtatttattttttctattggtGCTGAAACTGGTAGCTGAAAGATGTA
AACCTGTAGACACTGGTAGTACACTGATGGGGACTGGTTTAAGCACTGTT
GTACAATTTTAATTTGAGAGAAATCACTTGGTATATGACANGACACTGGT
AGTACACTGATGGGGACTGGTTTAAGCACTGTTGTACAATTTTAATTTGA
GAGAAATCACTTGGTATATGACATAATTTGGCGTTTTTATGCATAGAGAG
TTCTTATTATTTCGTTTAGATCACTAAATAGGTTATGGTTTGACTCTGCA
CACTCAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGATAA
GGCACTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCACGAA
GTTTGGTCGCACATCGcaattattttaaaggtattttgtAACCCAAAAAA
CTCATTTCATCTTGTTGACATTTTTTTATGATTGATTCAAATCGAAAAGT
ATGTAATTTTTATAAGTTTTCGCATAGGTGAAATGAAAACCCATTTAGAC
AATCTATGGCAGTTTTTGCATCTCACAAGTCAAAAATTATTCTCAGCCAG
TTGATGATCCAACAATATAACATTCGTTTTTTTCTCTTTAGCAAATGAGT
GTCGAAATTGGATGTTCTACTATGCCCCTATGATCTTAAATGGAATTTTG
CCAGATCCTTACTTTAGGTAAGAACACACTGATTTCGAATTAGTTTTTTG
CGTAATAGCTTTTGTACCTAATAAGCGTCCTCCTCTAATTAATTTCTTTG
CCCAAGTTGAATCACACGATCCTATACACAATACTTTATTTCCTTTCTTA
GCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaaaagaagaa
attactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAAAGATTTGC
AGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTATTCATTGTA
AATGgggtttaaaaattttgaaactttataACAGAGGTTAGTTTTATTGA
ATGAGGGCTTTGATTTTGGAAG

Coding sequence (CDS) from alignment at sc0001595:38903..44174+

>TCONS_00037244 ID=TCONS_00037244|Name=TCONS_00037244|organism=Clytia hemisphaerica|type=CDS|length=7992bp|location=Sequence derived from alignment at sc0001595:38903..44174+ (Clytia hemisphaerica)
ATGAACACTGATGGCGTCAGCCTCTTCAATAGTAGTTCTTTTTCAGTATG
GCCAGTTTATCTGCGTATCAATGAACTGCCACCTAAAATGAGGAAATCAA
AAAAGTACAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCCTTAC
ATGAGGACATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCACATT
TGAAGGGTTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGGGA
AGATGGCAATAACTGGTGGACTGTTCGATCTACCAGCAAAATGTTTGGTT
CAAGAAACGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAAT
TGAGGGAGAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATC
AAGAACAAAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTA
GAAACAAATGAAACAGTTTTTGGTATACGTGGATACTCGATCCTTGGTGA
ACTGCCATTTATTGATATAATTTGGAATATACCGTACGACTATATGCATG
GCATATTTCAAGGTGTAGCGAAATCACTAAATAGGTTATGGTTTGACTCT
GCACACTCAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGA
TAAGGCACTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCAC
GAAGTTTGGTCGCACATCGcaattattttaaagCAAATGAGTGTCGAAAT
TGGATGTTCTACTATGCCCCTATGATCTTAAATGGAATTTTGCCAGATCC
TTACTTTAGCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaa
aagaagaaattactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAA
AGATTTGCAGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTAT
TCATTGTAAATGgggtttaaaaattttgaaactttataACAGAGGTTAGA
TGAACACTGATGGCGTCAGCCTCTTCAATAGTAGTTCTTTTTCAGTATGG
CCAGTTTATCTGCGTATCAATGAACTGCCACCTAAAATGAGGAAATCAAA
AAAGTACAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCCTTACA
TGAGGACATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCACATTT
GAAGGGTTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGGGAA
GATGGCAATAACTGGTGGACTGTTCGATCTACCAGCAAAATGTTTGGTTC
AAGAAACGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAATT
GAGGGAGAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATCA
AGAACAAAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTAG
AAACAAATGAAACAGTTTTTGGTATACGTGGATACTCGATCCTTGGTGAA
CTGCCATTTATTGATATAATTTGGAATATACCGTACGACTATATGCATGG
CATATTTCAAGGTGTAGCGAAATCACTAAATAGGTTATGGTTTGACTCTG
CACACTCAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGAT
AAGGCACTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCACG
AAGTTTGGTCGCACATCGcaattattttaaagCAAATGAGTGTCGAAATT
GGATGTTCTACTATGCCCCTATGATCTTAAATGGAATTTTGCCAGATCCT
TACTTTAGCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaaa
agaagaaattactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAAA
GATTTGCAGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTATT
CATTGTAAATGgggtttaaaaattttgaaactttataACAGAGGTTAGAT
GAACACTGATGGCGTCAGCCTCTTCAATAGTAGTTCTTTTTCAGTATGGC
CAGTTTATCTGCGTATCAATGAACTGCCACCTAAAATGAGGAAATCAAAA
AAGTACAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCCTTACAT
GAGGACATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCACATTTG
AAGGGTTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGGGAAG
ATGGCAATAACTGGTGGACTGTTCGATCTACCAGCAAAATGTTTGGTTCA
AGAAACGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAATTG
AGGGAGAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATCAA
GAACAAAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTAGA
AACAAATGAAACAGTTTTTGGTATACGTGGATACTCGATCCTTGGTGAAC
TGCCATTTATTGATATAATTTGGAATATACCGTACGACTATATGCATGGC
ATATTTCAAGGTGTAGCGAAATCACTAAATAGGTTATGGTTTGACTCTGC
ACACTCAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGATA
AGGCACTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCACGA
AGTTTGGTCGCACATCGcaattattttaaagCAAATGAGTGTCGAAATTG
GATGTTCTACTATGCCCCTATGATCTTAAATGGAATTTTGCCAGATCCTT
ACTTTAGCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaaaa
gaagaaattactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAAAG
ATTTGCAGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTATTC
ATTGTAAATGgggtttaaaaattttgaaactttataACAGAGGTTAGATG
AACACTGATGGCGTCAGCCTCTTCAATAGTAGTTCTTTTTCAGTATGGCC
AGTTTATCTGCGTATCAATGAACTGCCACCTAAAATGAGGAAATCAAAAA
AGTACAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCCTTACATG
AGGACATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCACATTTGA
AGGGTTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGGGAAGA
TGGCAATAACTGGTGGACTGTTCGATCTACCAGCAAAATGTTTGGTTCAA
GAAACGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAATTGA
GGGAGAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATCAAG
AACAAAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTAGAA
ACAAATGAAACAGTTTTTGGTATACGTGGATACTCGATCCTTGGTGAACT
GCCATTTATTGATATAATTTGGAATATACCGTACGACTATATGCATGGCA
TATTTCAAGGTGTAGCGAAATCACTAAATAGGTTATGGTTTGACTCTGCA
CACTCAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGATAA
GGCACTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCACGAA
GTTTGGTCGCACATCGcaattattttaaagCAAATGAGTGTCGAAATTGG
ATGTTCTACTATGCCCCTATGATCTTAAATGGAATTTTGCCAGATCCTTA
CTTTAGCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaaaag
aagaaattactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAAAGA
TTTGCAGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTATTCA
TTGTAAATGgggtttaaaaattttgaaactttataACAGAGGTTAGATGA
ACACTGATGGCGTCAGCCTCTTCAATAGTAGTTCTTTTTCAGTATGGCCA
GTTTATCTGCGTATCAATGAACTGCCACCTAAAATGAGGAAATCAAAAAA
GTACAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCCTTACATGA
GGACATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCACATTTGAA
GGGTTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGGGAAGAT
GGCAATAACTGGTGGACTGTTCGATCTACCAGCAAAATGTTTGGTTCAAG
AAACGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAATTGAG
GGAGAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATCAAGA
ACAAAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTAGAAA
CAAATGAAACAGTTTTTGGTATACGTGGATACTCGATCCTTGGTGAACTG
CCATTTATTGATATAATTTGGAATATACCGTACGACTATATGCATGGCAT
ATTTCAAGGTGTAGCGAAATCACTAAATAGGTTATGGTTTGACTCTGCAC
ACTCAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGATAAG
GCACTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCACGAAG
TTTGGTCGCACATCGcaattattttaaagCAAATGAGTGTCGAAATTGGA
TGTTCTACTATGCCCCTATGATCTTAAATGGAATTTTGCCAGATCCTTAC
TTTAGCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaaaaga
agaaattactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAAAGAT
TTGCAGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTATTCAT
TGTAAATGgggtttaaaaattttgaaactttataACAGAGGTTAGATGAA
CACTGATGGCGTCAGCCTCTTCAATAGTAGTTCTTTTTCAGTATGGCCAG
TTTATCTGCGTATCAATGAACTGCCACCTAAAATGAGGAAATCAAAAAAG
TACAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCCTTACATGAG
GACATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCACATTTGAAG
GGTTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGGGAAGATG
GCAATAACTGGTGGACTGTTCGATCTACCAGCAAAATGTTTGGTTCAAGA
AACGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAATTGAGG
GAGAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATCAAGAA
CAAAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTAGAAAC
AAATGAAACAGTTTTTGGTATACGTGGATACTCGATCCTTGGTGAACTGC
CATTTATTGATATAATTTGGAATATACCGTACGACTATATGCATGGCATA
TTTCAAGGTGTAGCGAAATCACTAAATAGGTTATGGTTTGACTCTGCACA
CTCAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGATAAGG
CACTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCACGAAGT
TTGGTCGCACATCGcaattattttaaagCAAATGAGTGTCGAAATTGGAT
GTTCTACTATGCCCCTATGATCTTAAATGGAATTTTGCCAGATCCTTACT
TTAGCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaaaagaa
gaaattactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAAAGATT
TGCAGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTATTCATT
GTAAATGgggtttaaaaattttgaaactttataACAGAGGTTAGATGAAC
ACTGATGGCGTCAGCCTCTTCAATAGTAGTTCTTTTTCAGTATGGCCAGT
TTATCTGCGTATCAATGAACTGCCACCTAAAATGAGGAAATCAAAAAAGT
ACAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCCTTACATGAGG
ACATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCACATTTGAAGG
GTTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGGGAAGATGG
CAATAACTGGTGGACTGTTCGATCTACCAGCAAAATGTTTGGTTCAAGAA
ACGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAATTGAGGG
AGAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATCAAGAAC
AAAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTAGAAACA
AATGAAACAGTTTTTGGTATACGTGGATACTCGATCCTTGGTGAACTGCC
ATTTATTGATATAATTTGGAATATACCGTACGACTATATGCATGGCATAT
TTCAAGGTGTAGCGAAATCACTAAATAGGTTATGGTTTGACTCTGCACAC
TCAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGATAAGGC
ACTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCACGAAGTT
TGGTCGCACATCGcaattattttaaagCAAATGAGTGTCGAAATTGGATG
TTCTACTATGCCCCTATGATCTTAAATGGAATTTTGCCAGATCCTTACTT
TAGCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaaaagaag
aaattactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAAAGATTT
GCAGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTATTCATTG
TAAATGgggtttaaaaattttgaaactttataACAGAGGTTAGATGAACA
CTGATGGCGTCAGCCTCTTCAATAGTAGTTCTTTTTCAGTATGGCCAGTT
TATCTGCGTATCAATGAACTGCCACCTAAAATGAGGAAATCAAAAAAGTA
CAGAATCTTTGCTGGGCTCTGGTTTGGTTATAACAAGCCTTACATGAGGA
CATTTTTGCGACCATTAGTTGAGGAAATGAAGAAGCTCACATTTGAAGGG
TTTTCAATGATTGAGGAAGAAAGTGGCAAAAAAATGGAGGGGAAGATGGC
AATAACTGGTGGACTGTTCGATCTACCAGCAAAATGTTTGGTTCAAGAAA
CGGTTCAGTTCAACGGCTACCATGGTTGCAGCTGCTGTGAAATTGAGGGA
GAGGCTGTGGCTTCAAATGTAGTTTTTCCTTTCGTTGAAAATCAAGAACA
AAGAAGTCAACTGAGAACACTTGGACAAGCTATGCTTGCTTTAGAAACAA
ATGAAACAGTTTTTGGTATACGTGGATACTCGATCCTTGGTGAACTGCCA
TTTATTGATATAATTTGGAATATACCGTACGACTATATGCATGGCATATT
TCAAGGTGTAGCGAAATCACTAAATAGGTTATGGTTTGACTCTGCACACT
CAAAAGAACCATGGTATCTTGGCAAGGACGTTCATATTATTGATAAGGCA
CTGCTTTCATTGAGACCACCTGATGAAGTCACCAGACTGCCACGAAGTTT
GGTCGCACATCGcaattattttaaagCAAATGAGTGTCGAAATTGGATGT
TCTACTATGCCCCTATGATCTTAAATGGAATTTTGCCAGATCCTTACTTT
AGCCATTTTCTCCTTGTTGTAAATGGAATATTCATacttcaaaaagaaga
aattactGAAACCGAGTTGGAATTTGCAGAAAAATGTCTCAAAAGATTTG
CAGTAGACATGAAGGAAGTTTATGGTATTAATGTTTTCAGTATTCATTGT
AAATGgggtttaaaaattttgaaactttataACAGAGGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022044XLOC_022044Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037244-exon-sc0001595-1491911889:38903..38946TCONS_00037244-exon-sc0001595-1491911889:38903..38946Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1510915933:38903..38946TCONS_00037244-exon-sc0001595-1510915933:38903..38946Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1575043694:38903..38946TCONS_00037244-exon-sc0001595-1575043694:38903..38946Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1491911889:39942..40170TCONS_00037244-exon-sc0001595-1491911889:39942..40170Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1510915933:39942..40170TCONS_00037244-exon-sc0001595-1510915933:39942..40170Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1575043694:39942..40170TCONS_00037244-exon-sc0001595-1575043694:39942..40170Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1491911889:40499..40611TCONS_00037244-exon-sc0001595-1491911889:40499..40611Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1510915933:40499..40611TCONS_00037244-exon-sc0001595-1510915933:40499..40611Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1575043694:40499..40611TCONS_00037244-exon-sc0001595-1575043694:40499..40611Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1491911889:40960..41040TCONS_00037244-exon-sc0001595-1491911889:40960..41040Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1510915933:40960..41040TCONS_00037244-exon-sc0001595-1510915933:40960..41040Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1575043694:40960..41040TCONS_00037244-exon-sc0001595-1575043694:40960..41040Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1491911889:41282..41460TCONS_00037244-exon-sc0001595-1491911889:41282..41460Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1510915933:41282..41460TCONS_00037244-exon-sc0001595-1510915933:41282..41460Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1575043694:41282..41460TCONS_00037244-exon-sc0001595-1575043694:41282..41460Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1491911889:41839..41945TCONS_00037244-exon-sc0001595-1491911889:41839..41945Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1510915933:41839..41945TCONS_00037244-exon-sc0001595-1510915933:41839..41945Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1575043694:41839..41945TCONS_00037244-exon-sc0001595-1575043694:41839..41945Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1491911889:42358..42518TCONS_00037244-exon-sc0001595-1491911889:42358..42518Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1510915933:42358..42518TCONS_00037244-exon-sc0001595-1510915933:42358..42518Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1575043694:42358..42518TCONS_00037244-exon-sc0001595-1575043694:42358..42518Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1491911889:43744..43819TCONS_00037244-exon-sc0001595-1491911889:43744..43819Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1510915933:43744..43819TCONS_00037244-exon-sc0001595-1510915933:43744..43819Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1575043694:43744..43819TCONS_00037244-exon-sc0001595-1575043694:43744..43819Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1491911889:43954..44174TCONS_00037244-exon-sc0001595-1491911889:43954..44174Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1510915933:43954..44174TCONS_00037244-exon-sc0001595-1510915933:43954..44174Clytia hemisphaericaexon
TCONS_00037244-exon-sc0001595-1575043694:43954..44174TCONS_00037244-exon-sc0001595-1575043694:43954..44174Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037244-proteinTCONS_00037244-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001595supercontigsc0001595:38903..44174 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.28561	1.84126	1.45783	1.17352	0.724804	0.49565	0.184779	0.217024	0.390275	0.116761	0	0	0	0	0	0	0	0	0	0.0184542	0.862983	0.688827	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004242Transposase_21
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037244 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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