XLOC_021805 (gene) - C. hemisphaerica

Overview
NameXLOC_021805
Unique NameXLOC_021805
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001535:9355..13545+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021805 ID=XLOC_021805|Name=XLOC_021805|organism=Clytia hemisphaerica|type=gene|length=4191bp|location=Sequence derived from alignment at sc0001535:9355..13545+ (Clytia hemisphaerica)
ATAAGGAAGATATCAATTAATATTACTTACATAGGCTATTATTGTTCTAG
GTATCTCAAAATATTGCAGTAATTACACTAGATTTGCAAACCTAAAAAAC
ATTTCACTATTCAACATTTTTCACTAGAAAATGTCCGAACAAAAATTGTC
ccaattgaaaatcaaaagtgTAGAAATAAGAAAGTTCAATCCTAAAACAG
ATGCAAAAAGATTAACTGAAATATGGGTTAATGGTTTAGACCAATCAGTA
GACTCTCAATGGTGGTGGAACCGTGCTTATTGGAGAGAATTCTTCTCTCA
GTATGCAAAAGATGCAACTGCAGTTGATGGAGATATGGGCCCAGAAGGTA
CTAATCTTGAAAAATCGTGGTGTTTTGATGAAGAGAATGTACAAATGTTG
GTTGCTGAGCTCATATTTCAAGATCCAAAGATGGCACATCTTCTAGTTGG
AAGCATAGGAATCAAGAGAGGGTATGAGCACAGCAAAGATGGAACAATTT
TCACAATTTGGAGAATGTCAGTTGACATAAACTACAGAGGATATTCTATA
GGTGGAAAACTGTTATTAGCAGgagaaaaatgggcaaaacAAAAAGGAGG
CACGAAAATGAGCGCAGAATCAATGAATCCGATAGctattaaattttatt
tgaaacatGGTTATGAATGGTCGGAGTGGTCTTGGTGGGATTGGATTGTT
ttcaaatgcattggatcaattGGGatcaaatttcatgaaaaaactTTAGC
GTAAATAGAAACCTAGAAACTGGAAATCCCCACATTGCAAaactttgaca
aattttttgaacTCTAGAAATAAAGCACTTTATTTCAAAACCGTTGTCAT
GTTAACAAGTTTACCTTGAAACTTTATGACACCAAGAACAACTGGTGCTT
AtcaatttctaaaatatgaAACTGCACTACTTTCCAACCATTACATCCAA
TCTCGTTTATTATTCATTTATTAATTCGTTTGAGTGTTAatctcaggtgc
ctaataaataATATGCTGGTGGGTTtagaaataatttcaaaacatgaTTA
ACGAGAGGAACCTATTTCCTTGAGATCAGTAAAAGTGTTCTCATGAATAC
CCCCAAAATAAGATAAATAGACTTAATTCAGGTaatttggagcaaaataa
gggattCTTCTGTCAActgctaaaaattattttcaaaaattaacaaaaaa
agggCGCTGTTCATTAGGCAACTGATATTAGATTAATCAATTCTTTTGGG
tagaatatttttatatatagCCTTTTTTAGTTCATTTTATCAACAGTTTT
TTGATAggtcatttcatttttttttaaggaCGTGTATAAAATGTTGTAGT
TAAAATGCTGACATTTTGTGATGTGCAATTTGAatcagtaaaaaataaaa
taagtgAAAACAACATTCTATAAATACATAACAACATTAGAGTTTTTGTT
TCAGGGGCAACCGTAACAAACCTTCTCTTTAagaagatgttcttttaaaa
aagtcggtttttacatttctctatcatgtgGTCGGTTCAGTTGCTCATGT
GGtcagttcagttgttcacgtgttaggaACAAAAAATCTCTGTATATAAA
AgattaaatgttttgaaatatttttcattgttgCGAATATAAAAAGATGA
TAAGTTTTTGATTGTTCATGAGTTTCACTACTTGAATCAATTAATTAATT
GGGGAGTtcctaaacatcgaccagaaatgacgaccacgaccagcgaccac
gaccggcgaccacgaccggcgaccagataattTTTAGTTATCGAGTTTTT
CTCTTGTCGATGTTTAGAGACTCCCAATTAATTATCTTAACTTTAGAAAA
CGTTATTATAATGGAGGGTTACAATTATAAAGAAATACTGTACAAatata
attttctttgaatgaacTTCAAAGTCATGAGGTGGTGCATGCAGGTTTAA
TTGTTTCTGATTATTTAATCAAAATCAGTCATCAGCAACGCAAGATGACA
AAGTTGATTTTTAATAATGGATTCTTTGCAACACAGTCAATCAAAAAACA
ATCTATTTTTGAATTATGCATTTAAAAACGTGAGTTATTGCATGCACAAT
TCCTTTAATCTATCTTCCATTTAAATGATCTgcttattttgcaaaataac
tttagcagttttttttttcataaggaaGATATCAATTAATATTGCTTACA
TAGACAATATTGTTTTAGGTATCTCAAAATATTGCAGTAATTACACTAGA
TTTGTAAACATATAAAAAGACTTCACAAACCTCAATTCAATCTGAGCaac
attttcactaaaaaatggCAGAGCAAAAATTGTCccaattgaaaatcaaa
agtgTAGAAATAAGGAAGTTCAATCCTAAAACAGATGCAAAAAGATTAAC
TGAAATATGGGTTGATGGTTTGAGGCAAACAGTCGACTCTCAATGGTGGT
GGAAACGTGTTTATTGGAGAGAACTCTTCTCTCAGTATGCAAAAGATGCA
ACTGCAGTTGATGGAGATATGGGCCCAGAAGGTACTAATCTTGAAAAATC
ATGGTGTTTCGATGAAGAGAATGTACAAATGTTGGTTGCTGAGCTCATAT
TTCAAGATCCAAAGTTGGCACATCTTCTAGTTGGAAGCATAGGAATCAAG
AGAGGGTATGAGCACAGCAAAGATGGAACAATTTTCACAATTTGGAAAAT
GTCAGTTGACATAAACTACAGAGGATATTCTATAGGTGGAAAACTGTTAT
TAGAAGgagaaaaatgggcaaaacAAAAAGGAGGCACGAAAATAACAGCA
GCATCGATGAATCCGATAGCTagtaaattttatttaaaacatGGTTATGA
ATGGTCCGAGTGGTCTTGGTGGGATTGGATTGTTTTCAAATACATTGGAT
CAATGAATGGGAAATTGCATGAAAAAACTTTAGGGTAAAATTAGCAACCT
AGAAACTGGAAATCCCCACATTGCAAAACTCTGACAAATTTTTAGAACTC
TAGAAATAAAACTCTTGTTTATAACCTAGACTATTGAAGCTTTCTGATCA
TGTAAAAAATATTAGTAATGgtgatattttctttgaatttggtGATGTGG
GCATCAATAGATGTACCCTGTACATGACATCTTCATTTTAATTTGCCTCT
TAAAACCCTTTGTGCATCTTGGGGTCTCCCCccaagttttcaaaaacttt
tctgaTCTTTATTCAACCTTcttaaaatttgacattttttggtgaaaatt
tcgacatcattgatgacgtcattctaacatatttttggtcaaaattcttt
caTCTGCTGGTATCCTGTATTCTAATGACTTGTCAACAATTGCCCctttt
gcctaaataacccctggGTTACTGTATCCTGGGACTGGAAATGCTGATGG
CTTGAAATTTAAAGTTAAGTTTTTAAAAAGTGTTGTtgcgaaaatctatt
ttttctaGCCACACGTTAAATTAAATTCCCCCTAAAATAAAGTTTACTTT
TAACATACAAAATGTTTAACTTGATAATTTAGTCTTACTGGACAGGTCTT
CAGCAATGTCATGAAAGATAAAATAACCTATAGTTCAATATTCCTTGGCT
GCATCCATAGTCAAACGCAACGCACTGGACTCAACTTTTGTGGCTTCTAA
TTATTTAATATAGGCACAATTGTAGCaacaaaaagacaatgaaatgaATG
AATGTTTAGTCATGTGGAAAATTCATCTTTTGTActatattttgataata
ttggAAAATTCAACCTTTTGAGTGGAAtaaatgaatttgatatttttctt
ctaattttttcttacttttttgaaCTCCATCAATTTCAGATGACTAAAGG
TTGTGGTCCACTTAGCCTTTTTTGGTCGCCGTTCAATGCGCACGGctcga
aaaaaattgggggcCACTTATCTTTCAACCTATAGTAGTTTTTTAGATAT
TCCATTTCAAAGttccattttttgaagatttctgtaCAAAAACATCCCGC
CATCTTGTAACATCTCCACAGCACTGAAATGGAAAgtgtttcataaaaaa
atgtacGCAGAAAATTTGGGGCGAGAGTGTTTTTCCATATCAAGAGCTGT
AGACGTGGGTCACTTTACCTTTAACTTTCCCTTAGCACTTTCCACCCGAA
ACTATTTGGTTAgagattaaaagaaaaaaattacagtgcAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036913TCONS_00036913Clytia hemisphaericatranscript
TCONS_00036914TCONS_00036914Clytia hemisphaericatranscript
TCONS_00036915TCONS_00036915Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036914-proteinTCONS_00036914-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001535supercontigsc0001535:9355..13545 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.85	0.48	0.91	0.55	11.53	8.79	3.45	4.37	9.06	8.37	24.61	2.28	3.84	2.67	0.78	2.13	9.11	7.14	0.68	1.49	6.11	6.71	0.61	1.4	1.7	2.34	5.66	3.62	0.05	0.02