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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036914 ID=TCONS_00036914|Name=TCONS_00036914|organism=Clytia hemisphaerica|type=transcript|length=2011bp
ATCAATTAATATTACTTACATAGACAATATTGTTTTAGGTATCTCAAAAT
ATTGCAGTAATTACACTAGATTTGTAAACATATAAAAAGACTTCACAAAC
CTCAATTCAATCTGAGCaacattttcactaaaaaatggCAGAGCAAAAAT
TGTCccaattgaaaatcaaaagtgTAGAAATAAGGAAGTTCAATCCTAAA
ACAGATGCAAAAAGATTAACTGAAATATGGGTTGATGGTTTGAGGCAAAC
AGTCGACTCTCAATGGTGGTGGAAACGTGTTTATTGGAGAGAACTCTTCT
CTCAGTATGCAAAAGATGCAACTGCAGTTGATGGAGATATGGGCCCAGAA
GGTACTAATCTTGAAAAATCATGGTGTTTCGATGAAGAGAATGTACAAAT
GTTGGTTGCTGAGCTCATATTTCAAGATCCAAAGTTGGCACATCTTCTAG
TTGGAAGCATAGGAATCAAGAGAGGGTATGAGCACAGCAAAGATGGAACA
ATTTTCACAATTTGGAAAATGTCAGTTGACATAAACTACAGAGGATATTC
TATAGGTGGAAAACTGTTATTAGAAGgagaaaaatgggcaaaacAAAAAG
GAGGCACGAAAATAACAGCAGCATCGATGAATCCGATAGCTagtaaattt
tatttaaaacatGGTTATGAATGGTCCGAGTGGTCTTGGTGGGATTGGAT
TGTTTTCAAATACATTGGATCAATGAATGGGAAATTGCATGAAAAAACTT
TAGGGTAAAATTAGCAACCTAGAAACTGGAAATCCCCACATTGCAAAACT
CTGACAAATTTTTAGAACTCTAGAAATAAAACTCTTGTTTATAACCTAGA
CTATTGAAGCTTTCTGATCATGTAAAAAATATTAGTAATGgtgatatttt
ctttgaatttggtGATGTGGGCATCAATAGATGTACCCTGTACATGACAT
CTTCATTTTAATTTGCCTCTTAAAACCCTTTGTGCATCTTGGGGTCTCCC
CccaagttttcaaaaacttttctgaTCTTTATTCAACCTTcttaaaattt
gacattttttggtgaaaatttcgacatcattgatgacgtcattctaacat
atttttggtcaaaattctttcaTCTGCTGGTATCCTGTATTCTAATGACT
TGTCAACAATTGCCCcttttgcctaaataacccctggGTTACTGTATCCT
GGGACTGGAAATGCTGATGGCTTGAAATTTAAAGTTAAGTTTTTAAAAAG
TGTTGTtgcgaaaatctattttttctaGCCACACGTTAAATTAAATTCCC
CCTAAAATAAAGTTTACTTTTAACATACAAAATGTTTAACTTGATAATTT
AGTCTTACTGGACAGGTCTTCAGCAATGTCATGAAAGATAAAATAACCTA
TAGTTCAATATTCCTTGGCTGCATCCATAGTCAAACGCAACGCACTGGAC
TCAACTTTTGTGGCTTCTAATTATTTAATATAGGCACAATTGTAGCaaca
aaaagacaatgaaatgaATGAATGTTTAGTCATGTGGAAAATTCATCTTT
TGTActatattttgataatattggAAAATTCAACCTTTTGAGTGGAAtaa
atgaatttgatatttttcttctaattttttcttacttttttgaaCTCCAT
CAATTTCAGATGACTAAAGGTTGTGGTCCACTTAGCCTTTTTTGGTCGCC
GTTCAATGCGCACGGctcgaaaaaaattgggggcCACTTATCTTTCAACC
TATAGTAGTTTTTTAGATATTCCATTTCAAAGttccattttttgaagatt
tctgtaCAAAAACATCCCGCCATCTTGTAACATCTCCACAGCACTGAAAT
GGAAAgtgtttcataaaaaaatgtacGCAGAAAATTTGGGGCGAGAGTGT
TTTTCCATATCAAGAGCTGTAGACGTGGGTCACTTTACCTTTAACTTTCC
CTTAGCACTTTCCACCCGAAACTATTTGGTTAgagattaaaagaaaaaaa
ttacagtgcAC Run BLAST on NCBI protein sequence of TCONS_00036914-protein >TCONS_00036914-protein ID=TCONS_00036914-protein|Name=TCONS_00036914-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
MAEQKLSQLKIKSVEIRKFNPKTDAKRLTEIWVDGLRQTVDSQWWWKRVY
WRELFSQYAKDATAVDGDMGPEGTNLEKSWCFDEENVQMLVAELIFQDPK
LAHLLVGSIGIKRGYEHSKDGTIFTIWKMSVDINYRGYSIGGKLLLEGEK
WAKQKGGTKITAASMNPIASKFYLKHGYEWSEWSWWDWIVFKYIGSMNGK
LHEKTLG Run BLAST on NCBI transcript from alignment at sc0001535:9366..13545+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036914 ID=TCONS_00036914|Name=TCONS_00036914|organism=Clytia hemisphaerica|type=transcript|length=4180bp|location=Sequence derived from alignment at sc0001535:9366..13545+ (Clytia hemisphaerica)
ATCAATTAATATTACTTACATAGGCTATTATTGTTCTAGGTATCTCAAAA
TATTGCAGTAATTACACTAGATTTGCAAACCTAAAAAACATTTCACTATT
CAACATTTTTCACTAGAAAATGTCCGAACAAAAATTGTCccaattgaaaa
tcaaaagtgTAGAAATAAGAAAGTTCAATCCTAAAACAGATGCAAAAAGA
TTAACTGAAATATGGGTTAATGGTTTAGACCAATCAGTAGACTCTCAATG
GTGGTGGAACCGTGCTTATTGGAGAGAATTCTTCTCTCAGTATGCAAAAG
ATGCAACTGCAGTTGATGGAGATATGGGCCCAGAAGGTACTAATCTTGAA
AAATCGTGGTGTTTTGATGAAGAGAATGTACAAATGTTGGTTGCTGAGCT
CATATTTCAAGATCCAAAGATGGCACATCTTCTAGTTGGAAGCATAGGAA
TCAAGAGAGGGTATGAGCACAGCAAAGATGGAACAATTTTCACAATTTGG
AGAATGTCAGTTGACATAAACTACAGAGGATATTCTATAGGTGGAAAACT
GTTATTAGCAGgagaaaaatgggcaaaacAAAAAGGAGGCACGAAAATGA
GCGCAGAATCAATGAATCCGATAGctattaaattttatttgaaacatGGT
TATGAATGGTCGGAGTGGTCTTGGTGGGATTGGATTGTTttcaaatgcat
tggatcaattGGGatcaaatttcatgaaaaaactTTAGCGTAAATAGAAA
CCTAGAAACTGGAAATCCCCACATTGCAAaactttgacaaattttttgaa
cTCTAGAAATAAAGCACTTTATTTCAAAACCGTTGTCATGTTAACAAGTT
TACCTTGAAACTTTATGACACCAAGAACAACTGGTGCTTAtcaatttcta
aaatatgaAACTGCACTACTTTCCAACCATTACATCCAATCTCGTTTATT
ATTCATTTATTAATTCGTTTGAGTGTTAatctcaggtgcctaataaataA
TATGCTGGTGGGTTtagaaataatttcaaaacatgaTTAACGAGAGGAAC
CTATTTCCTTGAGATCAGTAAAAGTGTTCTCATGAATACCCCCAAAATAA
GATAAATAGACTTAATTCAGGTaatttggagcaaaataagggattCTTCT
GTCAActgctaaaaattattttcaaaaattaacaaaaaaagggCGCTGTT
CATTAGGCAACTGATATTAGATTAATCAATTCTTTTGGGtagaatatttt
tatatatagCCTTTTTTAGTTCATTTTATCAACAGTTTTTTGATAggtca
tttcatttttttttaaggaCGTGTATAAAATGTTGTAGTTAAAATGCTGA
CATTTTGTGATGTGCAATTTGAatcagtaaaaaataaaataagtgAAAAC
AACATTCTATAAATACATAACAACATTAGAGTTTTTGTTTCAGGGGCAAC
CGTAACAAACCTTCTCTTTAagaagatgttcttttaaaaaagtcggtttt
tacatttctctatcatgtgGTCGGTTCAGTTGCTCATGTGGtcagttcag
ttgttcacgtgttaggaACAAAAAATCTCTGTATATAAAAgattaaatgt
tttgaaatatttttcattgttgCGAATATAAAAAGATGATAAGTTTTTGA
TTGTTCATGAGTTTCACTACTTGAATCAATTAATTAATTGGGGAGTtcct
aaacatcgaccagaaatgacgaccacgaccagcgaccacgaccggcgacc
acgaccggcgaccagataattTTTAGTTATCGAGTTTTTCTCTTGTCGAT
GTTTAGAGACTCCCAATTAATTATCTTAACTTTAGAAAACGTTATTATAA
TGGAGGGTTACAATTATAAAGAAATACTGTACAAatataattttctttga
atgaacTTCAAAGTCATGAGGTGGTGCATGCAGGTTTAATTGTTTCTGAT
TATTTAATCAAAATCAGTCATCAGCAACGCAAGATGACAAAGTTGATTTT
TAATAATGGATTCTTTGCAACACAGTCAATCAAAAAACAATCTATTTTTG
AATTATGCATTTAAAAACGTGAGTTATTGCATGCACAATTCCTTTAATCT
ATCTTCCATTTAAATGATCTgcttattttgcaaaataactttagcagttt
tttttttcataaggaaGATATCAATTAATATTGCTTACATAGACAATATT
GTTTTAGGTATCTCAAAATATTGCAGTAATTACACTAGATTTGTAAACAT
ATAAAAAGACTTCACAAACCTCAATTCAATCTGAGCaacattttcactaa
aaaatggCAGAGCAAAAATTGTCccaattgaaaatcaaaagtgTAGAAAT
AAGGAAGTTCAATCCTAAAACAGATGCAAAAAGATTAACTGAAATATGGG
TTGATGGTTTGAGGCAAACAGTCGACTCTCAATGGTGGTGGAAACGTGTT
TATTGGAGAGAACTCTTCTCTCAGTATGCAAAAGATGCAACTGCAGTTGA
TGGAGATATGGGCCCAGAAGGTACTAATCTTGAAAAATCATGGTGTTTCG
ATGAAGAGAATGTACAAATGTTGGTTGCTGAGCTCATATTTCAAGATCCA
AAGTTGGCACATCTTCTAGTTGGAAGCATAGGAATCAAGAGAGGGTATGA
GCACAGCAAAGATGGAACAATTTTCACAATTTGGAAAATGTCAGTTGACA
TAAACTACAGAGGATATTCTATAGGTGGAAAACTGTTATTAGAAGgagaa
aaatgggcaaaacAAAAAGGAGGCACGAAAATAACAGCAGCATCGATGAA
TCCGATAGCTagtaaattttatttaaaacatGGTTATGAATGGTCCGAGT
GGTCTTGGTGGGATTGGATTGTTTTCAAATACATTGGATCAATGAATGGG
AAATTGCATGAAAAAACTTTAGGGTAAAATTAGCAACCTAGAAACTGGAA
ATCCCCACATTGCAAAACTCTGACAAATTTTTAGAACTCTAGAAATAAAA
CTCTTGTTTATAACCTAGACTATTGAAGCTTTCTGATCATGTAAAAAATA
TTAGTAATGgtgatattttctttgaatttggtGATGTGGGCATCAATAGA
TGTACCCTGTACATGACATCTTCATTTTAATTTGCCTCTTAAAACCCTTT
GTGCATCTTGGGGTCTCCCCccaagttttcaaaaacttttctgaTCTTTA
TTCAACCTTcttaaaatttgacattttttggtgaaaatttcgacatcatt
gatgacgtcattctaacatatttttggtcaaaattctttcaTCTGCTGGT
ATCCTGTATTCTAATGACTTGTCAACAATTGCCCcttttgcctaaataac
ccctggGTTACTGTATCCTGGGACTGGAAATGCTGATGGCTTGAAATTTA
AAGTTAAGTTTTTAAAAAGTGTTGTtgcgaaaatctattttttctaGCCA
CACGTTAAATTAAATTCCCCCTAAAATAAAGTTTACTTTTAACATACAAA
ATGTTTAACTTGATAATTTAGTCTTACTGGACAGGTCTTCAGCAATGTCA
TGAAAGATAAAATAACCTATAGTTCAATATTCCTTGGCTGCATCCATAGT
CAAACGCAACGCACTGGACTCAACTTTTGTGGCTTCTAATTATTTAATAT
AGGCACAATTGTAGCaacaaaaagacaatgaaatgaATGAATGTTTAGTC
ATGTGGAAAATTCATCTTTTGTActatattttgataatattggAAAATTC
AACCTTTTGAGTGGAAtaaatgaatttgatatttttcttctaattttttc
ttacttttttgaaCTCCATCAATTTCAGATGACTAAAGGTTGTGGTCCAC
TTAGCCTTTTTTGGTCGCCGTTCAATGCGCACGGctcgaaaaaaattggg
ggcCACTTATCTTTCAACCTATAGTAGTTTTTTAGATATTCCATTTCAAA
GttccattttttgaagatttctgtaCAAAAACATCCCGCCATCTTGTAAC
ATCTCCACAGCACTGAAATGGAAAgtgtttcataaaaaaatgtacGCAGA
AAATTTGGGGCGAGAGTGTTTTTCCATATCAAGAGCTGTAGACGTGGGTC
ACTTTACCTTTAACTTTCCCTTAGCACTTTCCACCCGAAACTATTTGGTT
AgagattaaaagaaaaaaattacagtgcAC Coding sequence (CDS) from alignment at sc0001535:9366..13545+ >TCONS_00036914 ID=TCONS_00036914|Name=TCONS_00036914|organism=Clytia hemisphaerica|type=CDS|length=624bp|location=Sequence derived from alignment at sc0001535:9366..13545+ (Clytia hemisphaerica)
atggCAGAGCAAAAATTGTCccaattgaaaatcaaaagtgTAGAAATAAG
GAAGTTCAATCCTAAAACAGATGCAAAAAGATTAACTGAAATATGGGTTG
ATGGTTTGAGGCAAACAGTCGACTCTCAATGGTGGTGGAAACGTGTTTAT
TGGAGAGAACTCTTCTCTCAGTATGCAAAAGATGCAACTGCAGTTGATGG
AGATATGGGCCCAGAAGGTACTAATCTTGAAAAATCATGGTGTTTCGATG
AAGAGAATGTACAAATGTTGGTTGCTGAGCTCATATTTCAAGATCCAAAG
TTGGCACATCTTCTAGTTGGAAGCATAGGAATCAAGAGAGGGTATGAGCA
CAGCAAAGATGGAACAATTTTCACAATTTGGAAAATGTCAGTTGACATAA
ACTACAGAGGATATTCTATAGGTGGAAAACTGTTATTAGAAGgagaaaaa
tgggcaaaacAAAAAGGAGGCACGAAAATAACAGCAGCATCGATGAATCC
GATAGCTagtaaattttatttaaaacatGGTTATGAATGGTCCGAGTGGT
CTTGGTGGGATTGGATTGTTTTCAAATACATTGGATCAATGAATGGGAAA
TTGCATGAAAAAACTTTAGGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036914-exon-sc0001535-1491911889:9366..9384 | TCONS_00036914-exon-sc0001535-1491911889:9366..9384 | Clytia hemisphaerica | exon |
| TCONS_00036914-exon-sc0001535-1510915933:9366..9384 | TCONS_00036914-exon-sc0001535-1510915933:9366..9384 | Clytia hemisphaerica | exon |
| TCONS_00036914-exon-sc0001535-1575043694:9366..9384 | TCONS_00036914-exon-sc0001535-1575043694:9366..9384 | Clytia hemisphaerica | exon |
| TCONS_00036914-exon-sc0001535-1491911889:11554..13545 | TCONS_00036914-exon-sc0001535-1491911889:11554..13545 | Clytia hemisphaerica | exon |
| TCONS_00036914-exon-sc0001535-1510915933:11554..13545 | TCONS_00036914-exon-sc0001535-1510915933:11554..13545 | Clytia hemisphaerica | exon |
| TCONS_00036914-exon-sc0001535-1575043694:11554..13545 | TCONS_00036914-exon-sc0001535-1575043694:11554..13545 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001535 | supercontig | sc0001535:9366..13545 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008080 | N-acetyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008080 |
N-acetyltransferase activity |
Blast
The following BLAST results are available for this feature:
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