XLOC_021751 (gene) - C. hemisphaerica

Overview
NameXLOC_021751
Unique NameXLOC_021751
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001520:9189..14989-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021751 ID=XLOC_021751|Name=XLOC_021751|organism=Clytia hemisphaerica|type=gene|length=5801bp|location=Sequence derived from alignment at sc0001520:9189..14989- (Clytia hemisphaerica)
AAAATATCGCACTTGCTAAACATTCTTATCAACAACATAAACAAACAAAA TGGCAGCGAAGTGAACATCAGAAAGTTAATCTCAATTTCTTCTACGCCGT AATTCGCAGACTATCGTCCAAGGACTCGTCGTTGCTTGCAAGACGACTCA GTCATTAAGCATCTGGATGATATGGCTCTTTCTCAAATAGGTCAGGGTCG TGTTACTACAACAGCACTCACAAACCACTCAAGATACCTGACAATAATCG ATGATGAAAAGACGGCGCAGCACAAGAAAAAGACATTTCTTTGCGAACAG CAACAGCAGGAGAATCATAACATCCAAAAGAAAGGAACACGGTTGATGCA TACGACCACTTTAATCTTAGGGGATAAATCGAACATCACTCAGGAATACC GTTCTAATACAAAACATGTATGACATAAATTAGATTTACGCGTATTTCCC CCATCCCATCACCCAACATCGCGGTGTTATTATATCTATCGCATCAATAT TTTTCAATTTTCACTCCAAGTTTTTCCTCGAACCACAGAAACAGTCCTGT GGAAGTGCATTCATCGAGATAAGCTCAAAATAAGGCAAAGATAAGACATA TTATAGCCTTTCATTCGTCAATATTACTATAGTCGTACAAACNTTTCGCG AGGACAAAAAATCGCGAAATTCACGACATTTACTTTCGCGAATTTAACAA AAAAATATTTTTCGCGAGCATAAACTTTCGCGAATCACGACATAAAATTG AGAATTTTCGCATGAAAAAATGGCTTAAAGGGACAAGTACTTCTTGGATT GGCTTGAAACATTTGTCGGTTGACTTATTAGTCTTTTAGCAGGCTTAAAA GTGCCATAAAAGTTACATTTTATTCAAAGTTTGAAATTTTACAGATTTTC TATTTTGTCTAGGATTTTTCGCGAGCATAAACTTTCGCGAATGGCTGTTC CTAGAATTTTTAAAGACATTTACTTTCGCGAAAAGGGCCAAAATTCGCGA AAATCGCGAAAGTTTCTGCCCGCGAAAGTTTCTACGCCTAAAGTAGTTCT CTTCAATAAGTAAGTTTCCTTTATCTCTTATTTTATGCATGTAAGGCTAC AGCACTTATAACAATCCCGAACGGGTATTTGGCATGTATATGGGATCGTG CCTTATGCCACTTATCAATGATTAGATTGACAGAAAAATAATCAAAGTAT TAAATAATTATACTTTTCAATGTAGAGTTTCAGCGGGAAAAAAGATCTAT TGCCTTGTATTCAACGAAGACCCTATCCTTCGCAGCACAAAAATCAATTC GTGATTGGAGATAAATCAATGGCAGCTTTTACAGAACATCCTAAACGATT CAATTTTGCTACGATACAACAGGTAAAGACAATACTTAATTCAATAAAAA CGTTGACGTGTATAGCAAATTAAGACTCGATAAACGTTTCTAATGGTGTT CTACCTAAAGCAACACGAAAGGGATTGGGTGGTCCGAGTTTAGCAAGTTT GAGTGACGTCAAATCAAGAGGGGCCCTATAGAGCTCGCTTAAGGATGTTC GCCATAATACGCCCATCGCCATATTTGACGTATACTACGATAAACGCCGG CGTATATACACACAATGAGCCCAATGATAGCAATTTTAAATCGACTTCTA GACAAAGTCAATCCAACCAGAAAACCAGGGGGTCATCAGTGCTCAGAAAG GGGTACATCATGGAATTGGTCATTTGCTTTTCTAGATGTTAAAGTTATAA ACTTCCAGGAAAAATTTCCCCAAAAAGTTAAAAAGTGTACTTACTCCACT TGAAAGTAACTTCGTATTTTTTGGTTGTTACACACTACCACCCTGCAGAA ACTTAAATAATTTGTAAAGCAAATCCGAGTCCCATCCTCTTGTGGTTTTA GGGCAATTGGTAATAGTCGAATCTTATTATATACTGTAAGGATTGAAAGC CATTATTATTATTATTATTATTATTATTGCGTATAAGAAGCGCAAGAAAA AGAAACAGCTGGTATTTTGTAAAGAACAAACGAACAATAACTCTCTTTTT ATTCCCTTTTAAAAGATTTTATAAGCAAAAAAGGGCTACGAAAAAATTTT CTCTGCGTACGTACATTTTTCTTTGACCCCCCCCATGTACGCAAGCATCA TACGCTTTTAAGAGACCCCCTCCCCCTTAGTGCGTACGTACTATGTGGAC GGCCCCGAAATGCGGCGGAAATTTTAAGTGATCATTTTTGCTTCCCTAAG AACGATTCCTCTGTAGCTTTGACTCAATGTTTTAGGGTTACTCTCGGGTA CCTAATAGCCGTCCCCCCCCGCTAATTAATTTTTCGAAAATTTTCCACCC AGGACATTCTTATTCCAACCCCCCGCTTATTANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCTTGAACATTATTTTACGTTTCTCT CATTTTAGAATCCACATTTACTTGGTATTAGCCAGACACATAGAGCAATA GGGTTTCACCAAATGAAGGGTTCTAACATGCTGCAGTCGTTATCTCACAA TAATAACAAAGTAAGTGGTAGTTCTGTTGATAGATCCCATCCAACTTAAT CTAATCTCTTGGTTTTAAATGAATCAAAACATCGCTGTTGGTGTATCTAG CCCCCTCCCCGATAAGCCTCGTTTATATATTTATTTTATGAGGATAGCCA TATGAGCCTGACAAGGAAGCAGTCGCTTTTTTGAGAATAAACCATGAAAA ACACAATTTGTTTCAATTCTAAATAATGTCAACTCAACCAAATTCCTTTG TTTTTTTTTTACGATTTTGATGACAAATCGCGTTCATCAGTAAAAGCAAA TGTGGTGCAAACTTTGGGTAGATAGAATATTTAGTAGGGGGAAATTTGTT CGTTTTTTTGAGGTCGCTCGATTGTTTTGGTCAAAGCACTTGTTATACAT TTTTGGAAAGCTAAGGGGTAGGGGAATCAAAATAACTTAGGTGCCATTTT TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAAATTAATGAAA ATTTTAGCTTGAGAAAACGGAGACCTGTTGTATATTTTTGGAAAGCTCTC AAAAATTTAAGATTAGAGATATATTGCAAGTATAGGTTGAAAACCGTGTT TTTCAGCCAGAAACAGCTGTTTTGTCCAGTTTTTGTGCTCTTTGAAGCTC AATATCTCGAGTTAGGTACTGAAATCACCTATACTTGCAATACATGTTTT TTTTTTATAAGCAAGTGTATGCTCCTTGGTCAGGCTCGTGTATGCTTAAG TTCTTTAAAGCATCCAGGCATAGTTTATGCTTATTACATGCTTATGAATC ATGCTTATGATTCACCCCGAGCCAAGTTTTTAGTGAAATTTCAGAAATTT TGTAAAAATTTGTTCAGATTTTGGTAGCAGTGGAATGTAGCTGGCCGTGG AATGTGTTTTTTTACTTGATCTCTACCAAACCTTTTTAAACAGATAAAAA ATTACAACTTGAAAAGTATTCCACGCTGACATATATGCTTATGTTATGCC TAGAAATTCTGCAAATCTGAGCCTTCATATGCTTATAAGCGTTATGCTTA TAAAAAAAAAACATGTATATCTCTAATCCTAATTTTTGAGAGCTTTCCAA AAATATACAACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATAAATTTT TAACCCTATGATTTTTGCCTGAGACCGTCATATATGTCCGAAAATCACAC CAAAATGTCCGAAAAAAATTGGAACCCAAGTAATTTTGATTCCCCTACGC CTTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACCAAAACAATCGAGC GATTTTACAAAATGCCCTCTACTAATTGTATTTGATGCTGATACTGATTT GTTTTTCGATTTTTTCAGATGCCCAGAAGATCTCCGACGAACTCATCAGG CACGAATGTTATTAACCAAGGTTCAAAATCACCAGATCTGAAAAAAGTTG TGAAAACCACTTCTTCAACATTTGATGTTATACGTAAAGGTAAAATATAA TTTAAAATAAAGATGTCAAATTTGGTTTGAAAACTTATATCGTCTTATGT ATACATTTACTGTGAATTACTTATGGAGAGGTTGTAAGAAGTACTATAGA AATTATCTCCATGGCGAATCAATGAAATTTAAAATCGTTTTTGGATTAGT TTTAAAGAACTCATTTTGGCGAATTTTGCCAAAAATAGCTAAAATGAAAA AAAATCCTGCCAAAAAAGTTTTTTATCTAGAATTATTAGTTTTAACACTT TTTTTCATTTCAGGAAATACAAGAGCCAATCATCACTGTGTGTCAGGAAA TAAATTTCTTCAACGAGTTCGAGAAAGTAAAACAGAAAATTTTCTATCAT GAACAAAAACACACCTCTTTTTCGAATAATTTTTGTAAGGCATATTCCGA TGAATTTTTATACGGTGAACACAGATTTTTTTTAAATGTTTTGTATCATA GTCCTATCTTTTTTGTAAAAACCAACTTATTTTCTTGAATTAAAAAATAC AAATTTTTAAAAGCAATCGATTGAAAGTTTATTAGGATTTCAAACTTTTC CATGCGTATAATATAATCCATCAAGATTGAATAATTCCCTCTTTTTTCAA TATGTTGAAATAAGTCTTGCCCTCCGCAATGACGAAAGTTCATATTCGAA GTTTAATAGCATTCCCCACTAGAATGGAGGTCTTGGTGGCGGTCGACTCC ACCCACCTGAGGGCGGATTATTAAAAGGAGGACGTGGTTGAACAGGTTGG GACATCAAAGGTTGAGGTTCACCATTCATAGGTGGTGGTGGTCCATAACG CCCTTGGGGTGGGCCAGGCGGTGGTCTCGGTCCTCGGTTCATGGGCGACA TTCCTGGAACAAATCGGAGAAATAAGTGTAAGTAGATGAGGGTGAAAAAT TCACGGTCTTCAAAGTGCTAGAATAATGAATTGTGCTGGGATTTATCTGA TATGGATTTAAGACATGCATTGCAGGTGTAGGTAGAACTGGTCATTACTC TCGGGTGCGTGTCAAATTTACCACCTGTACGCACCTTATTAGGAACTGTA CGTTTATTTATTCTGAAGAATTTTCCCGCCTGTACGTTTATTCCCTCCTG T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036824TCONS_00036824Clytia hemisphaericatranscript
TCONS_00036823TCONS_00036823Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036823-proteinTCONS_00036823-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001520supercontigsc0001520:9189..14989 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.58 1.61 0.93 1.11 30.52 20.55 26.81 26.9 16.26 20.79 21.23 29.29 3.54 4.05 1.45 1.9 1.51 1.92 3.48 1.64 2.03 2.13 2.06 1.97 56 33.15 3.34 5.14 0.95 1.29