TCONS_00036823 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036823
Unique NameTCONS_00036823
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1625

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036823 ID=TCONS_00036823|Name=TCONS_00036823|organism=Clytia hemisphaerica|type=transcript|length=1625bp
AAAATATCGCACTTGCTAAACATTCTTATCAACaacataaacaaacaaaa
tggcagcgAAGTGAACATCAGAAAGTTAATCTCAATTTCTTCTACGCCGT
AATTCGCAGACTATCGTCCAAGGACTCGTCGTTGCTTGCAAGACGACTCA
GTCATTAAGCATCTGGATGATATGGCTCTTTCTCAAATAGGTCAGGGTCG
TGTTACTACAACAGCACTCACAAACCACTCAAGATACCTGACAATAATCG
ATGATGAAAAGACGGCGCAGCACAAGAAAAAGACATTTCTTTGCGAACAG
CAACAGCAGGAGAATCATAACATCCAAAAGAAAGGAACACGGTTGATGCA
TACGACCACTTTAATCTTAGGGGATAAATCGAACATCACTCAGGAATACC
GTTCTAATACAAAACATAGTTTCAGCGGGAAAAAAGATCTATTGCCTTGT
ATTCAACGAAGACCCTATCCTTCGCAGCACAAAAATCAATTCGTGATTGG
AGATAAATCAATGGCAGCTTTTACAGAACATCCTAAACGATTCAATTTTG
CTACGATACAACAGAATCCACATTTACTTGGTATTAGCCAGACACATAGA
GCAATAGGGTTTCACCAAATGAAGGGTTCTAACATGCTGCAGTCGTTATC
TCACAATAATAACAAAaTGCCCAGAAGATCTCCGACGAACTCATCAGGCA
CGAATGTTATTAACCAAGGTTCAAAATCACCAGATCTGAAAAAAGTTGTG
AAAACCACTTCTTCAACATTTGATGTTATACGTAAAGgaaATACAAGAGC
CAATCATCACTGTGTGTCAGGAAATAAATTTCTTCAACGAGTTCGAGAAa
gtaaaacagaaaattttctATCATGAACAAAAACACACCTCTTTTTCGAA
TAATTTTTGTAAGGCATATTCCGATGAATTTTTATACGGTGAacacagat
tttttttaaatgttttgtatCATAGTCCtatcttttttgtaaaaaccaac
ttattttcttgaattaaaaaatacaaatttttaaaaGCAATCGATTGAAA
GTTTATTAGGATTTCAAACTTTTCCATGCGTATAATATAATCCATCAAGA
TTGAATAATTCCCTCTTTTTTCAATATGTTGAAATAAGTCTTGCCCTCCG
CAATGACGAAAGTTCATATTCGAAGTTTAATAGCATTCCCCACTAGAATG
GAGGTCTTGGTGGCGGTCGACTCCACCCACCTGAGGGCGGATTATTAAAA
GGAGGACGTGGTTGAACAGGTTGGGACATCAAAGGTTGAGGTTCACCATT
CATAGGTGGTGGTGGTCCATAACGCCCTTGGGGTGGGCCAGGCGGTGGTC
TCGGTCCTCGGTTCATGGGCGACATTCCTGGAACAAATCGGAGAAATAAG
TGTAAGTAGATGAGGGTGAAAAATTCACGGTCTTCAAAGTGCTAGAATAA
TGAATTGTGCTGGGATTTATCTGATATGGATTTAAGACATGCATTGCAGG
TGTAGGTAGAACTGGTCATTACTCTCGGGTGCGTGTCAAATTTACCAcct
gtacgcaccttattaggaactgtacgtttatttattctgaagaattttcc
cgcctgtacgtttattccctcctgt
Run BLAST on NCBI

protein sequence of TCONS_00036823-protein

>TCONS_00036823-protein ID=TCONS_00036823-protein|Name=TCONS_00036823-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
MALSQIGQGRVTTTALTNHSRYLTIIDDEKTAQHKKKTFLCEQQQQENHN
IQKKGTRLMHTTTLILGDKSNITQEYRSNTKHSFSGKKDLLPCIQRRPYP
SQHKNQFVIGDKSMAAFTEHPKRFNFATIQQNPHLLGISQTHRAIGFHQM
KGSNMLQSLSHNNNKMPRRSPTNSSGTNVINQGSKSPDLKKVVKTTSSTF
DVIRKGNTRANHHCVSGNKFLQRVRESKTENFLS
Run BLAST on NCBI

transcript from alignment at sc0001520:9189..14989-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036823 ID=TCONS_00036823|Name=TCONS_00036823|organism=Clytia hemisphaerica|type=transcript|length=5801bp|location=Sequence derived from alignment at sc0001520:9189..14989- (Clytia hemisphaerica)
AAAATATCGCACTTGCTAAACATTCTTATCAACAACATAAACAAACAAAA TGGCAGCGAAGTGAACATCAGAAAGTTAATCTCAATTTCTTCTACGCCGT AATTCGCAGACTATCGTCCAAGGACTCGTCGTTGCTTGCAAGACGACTCA GTCATTAAGCATCTGGATGATATGGCTCTTTCTCAAATAGGTCAGGGTCG TGTTACTACAACAGCACTCACAAACCACTCAAGATACCTGACAATAATCG ATGATGAAAAGACGGCGCAGCACAAGAAAAAGACATTTCTTTGCGAACAG CAACAGCAGGAGAATCATAACATCCAAAAGAAAGGAACACGGTTGATGCA TACGACCACTTTAATCTTAGGGGATAAATCGAACATCACTCAGGAATACC GTTCTAATACAAAACATGTATGACATAAATTAGATTTACGCGTATTTCCC CCATCCCATCACCCAACATCGCGGTGTTATTATATCTATCGCATCAATAT TTTTCAATTTTCACTCCAAGTTTTTCCTCGAACCACAGAAACAGTCCTGT GGAAGTGCATTCATCGAGATAAGCTCAAAATAAGGCAAAGATAAGACATA TTATAGCCTTTCATTCGTCAATATTACTATAGTCGTACAAACNTTTCGCG AGGACAAAAAATCGCGAAATTCACGACATTTACTTTCGCGAATTTAACAA AAAAATATTTTTCGCGAGCATAAACTTTCGCGAATCACGACATAAAATTG AGAATTTTCGCATGAAAAAATGGCTTAAAGGGACAAGTACTTCTTGGATT GGCTTGAAACATTTGTCGGTTGACTTATTAGTCTTTTAGCAGGCTTAAAA GTGCCATAAAAGTTACATTTTATTCAAAGTTTGAAATTTTACAGATTTTC TATTTTGTCTAGGATTTTTCGCGAGCATAAACTTTCGCGAATGGCTGTTC CTAGAATTTTTAAAGACATTTACTTTCGCGAAAAGGGCCAAAATTCGCGA AAATCGCGAAAGTTTCTGCCCGCGAAAGTTTCTACGCCTAAAGTAGTTCT CTTCAATAAGTAAGTTTCCTTTATCTCTTATTTTATGCATGTAAGGCTAC AGCACTTATAACAATCCCGAACGGGTATTTGGCATGTATATGGGATCGTG CCTTATGCCACTTATCAATGATTAGATTGACAGAAAAATAATCAAAGTAT TAAATAATTATACTTTTCAATGTAGAGTTTCAGCGGGAAAAAAGATCTAT TGCCTTGTATTCAACGAAGACCCTATCCTTCGCAGCACAAAAATCAATTC GTGATTGGAGATAAATCAATGGCAGCTTTTACAGAACATCCTAAACGATT CAATTTTGCTACGATACAACAGGTAAAGACAATACTTAATTCAATAAAAA CGTTGACGTGTATAGCAAATTAAGACTCGATAAACGTTTCTAATGGTGTT CTACCTAAAGCAACACGAAAGGGATTGGGTGGTCCGAGTTTAGCAAGTTT GAGTGACGTCAAATCAAGAGGGGCCCTATAGAGCTCGCTTAAGGATGTTC GCCATAATACGCCCATCGCCATATTTGACGTATACTACGATAAACGCCGG CGTATATACACACAATGAGCCCAATGATAGCAATTTTAAATCGACTTCTA GACAAAGTCAATCCAACCAGAAAACCAGGGGGTCATCAGTGCTCAGAAAG GGGTACATCATGGAATTGGTCATTTGCTTTTCTAGATGTTAAAGTTATAA ACTTCCAGGAAAAATTTCCCCAAAAAGTTAAAAAGTGTACTTACTCCACT TGAAAGTAACTTCGTATTTTTTGGTTGTTACACACTACCACCCTGCAGAA ACTTAAATAATTTGTAAAGCAAATCCGAGTCCCATCCTCTTGTGGTTTTA GGGCAATTGGTAATAGTCGAATCTTATTATATACTGTAAGGATTGAAAGC CATTATTATTATTATTATTATTATTATTGCGTATAAGAAGCGCAAGAAAA AGAAACAGCTGGTATTTTGTAAAGAACAAACGAACAATAACTCTCTTTTT ATTCCCTTTTAAAAGATTTTATAAGCAAAAAAGGGCTACGAAAAAATTTT CTCTGCGTACGTACATTTTTCTTTGACCCCCCCCATGTACGCAAGCATCA TACGCTTTTAAGAGACCCCCTCCCCCTTAGTGCGTACGTACTATGTGGAC GGCCCCGAAATGCGGCGGAAATTTTAAGTGATCATTTTTGCTTCCCTAAG AACGATTCCTCTGTAGCTTTGACTCAATGTTTTAGGGTTACTCTCGGGTA CCTAATAGCCGTCCCCCCCCGCTAATTAATTTTTCGAAAATTTTCCACCC AGGACATTCTTATTCCAACCCCCCGCTTATTANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCTTGAACATTATTTTACGTTTCTCT CATTTTAGAATCCACATTTACTTGGTATTAGCCAGACACATAGAGCAATA GGGTTTCACCAAATGAAGGGTTCTAACATGCTGCAGTCGTTATCTCACAA TAATAACAAAGTAAGTGGTAGTTCTGTTGATAGATCCCATCCAACTTAAT CTAATCTCTTGGTTTTAAATGAATCAAAACATCGCTGTTGGTGTATCTAG CCCCCTCCCCGATAAGCCTCGTTTATATATTTATTTTATGAGGATAGCCA TATGAGCCTGACAAGGAAGCAGTCGCTTTTTTGAGAATAAACCATGAAAA ACACAATTTGTTTCAATTCTAAATAATGTCAACTCAACCAAATTCCTTTG TTTTTTTTTTACGATTTTGATGACAAATCGCGTTCATCAGTAAAAGCAAA TGTGGTGCAAACTTTGGGTAGATAGAATATTTAGTAGGGGGAAATTTGTT CGTTTTTTTGAGGTCGCTCGATTGTTTTGGTCAAAGCACTTGTTATACAT TTTTGGAAAGCTAAGGGGTAGGGGAATCAAAATAACTTAGGTGCCATTTT TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAAATTAATGAAA ATTTTAGCTTGAGAAAACGGAGACCTGTTGTATATTTTTGGAAAGCTCTC AAAAATTTAAGATTAGAGATATATTGCAAGTATAGGTTGAAAACCGTGTT TTTCAGCCAGAAACAGCTGTTTTGTCCAGTTTTTGTGCTCTTTGAAGCTC AATATCTCGAGTTAGGTACTGAAATCACCTATACTTGCAATACATGTTTT TTTTTTATAAGCAAGTGTATGCTCCTTGGTCAGGCTCGTGTATGCTTAAG TTCTTTAAAGCATCCAGGCATAGTTTATGCTTATTACATGCTTATGAATC ATGCTTATGATTCACCCCGAGCCAAGTTTTTAGTGAAATTTCAGAAATTT TGTAAAAATTTGTTCAGATTTTGGTAGCAGTGGAATGTAGCTGGCCGTGG AATGTGTTTTTTTACTTGATCTCTACCAAACCTTTTTAAACAGATAAAAA ATTACAACTTGAAAAGTATTCCACGCTGACATATATGCTTATGTTATGCC TAGAAATTCTGCAAATCTGAGCCTTCATATGCTTATAAGCGTTATGCTTA TAAAAAAAAAACATGTATATCTCTAATCCTAATTTTTGAGAGCTTTCCAA AAATATACAACAGGTCTCCGTTTTCTCAAGCTAAAATTTTCATAAATTTT TAACCCTATGATTTTTGCCTGAGACCGTCATATATGTCCGAAAATCACAC CAAAATGTCCGAAAAAAATTGGAACCCAAGTAATTTTGATTCCCCTACGC CTTAGCTTTCCAAAAATGTATAACAAGTGCTTTGACCAAAACAATCGAGC GATTTTACAAAATGCCCTCTACTAATTGTATTTGATGCTGATACTGATTT GTTTTTCGATTTTTTCAGATGCCCAGAAGATCTCCGACGAACTCATCAGG CACGAATGTTATTAACCAAGGTTCAAAATCACCAGATCTGAAAAAAGTTG TGAAAACCACTTCTTCAACATTTGATGTTATACGTAAAGGTAAAATATAA TTTAAAATAAAGATGTCAAATTTGGTTTGAAAACTTATATCGTCTTATGT ATACATTTACTGTGAATTACTTATGGAGAGGTTGTAAGAAGTACTATAGA AATTATCTCCATGGCGAATCAATGAAATTTAAAATCGTTTTTGGATTAGT TTTAAAGAACTCATTTTGGCGAATTTTGCCAAAAATAGCTAAAATGAAAA AAAATCCTGCCAAAAAAGTTTTTTATCTAGAATTATTAGTTTTAACACTT TTTTTCATTTCAGGAAATACAAGAGCCAATCATCACTGTGTGTCAGGAAA TAAATTTCTTCAACGAGTTCGAGAAAGTAAAACAGAAAATTTTCTATCAT GAACAAAAACACACCTCTTTTTCGAATAATTTTTGTAAGGCATATTCCGA TGAATTTTTATACGGTGAACACAGATTTTTTTTAAATGTTTTGTATCATA GTCCTATCTTTTTTGTAAAAACCAACTTATTTTCTTGAATTAAAAAATAC AAATTTTTAAAAGCAATCGATTGAAAGTTTATTAGGATTTCAAACTTTTC CATGCGTATAATATAATCCATCAAGATTGAATAATTCCCTCTTTTTTCAA TATGTTGAAATAAGTCTTGCCCTCCGCAATGACGAAAGTTCATATTCGAA GTTTAATAGCATTCCCCACTAGAATGGAGGTCTTGGTGGCGGTCGACTCC ACCCACCTGAGGGCGGATTATTAAAAGGAGGACGTGGTTGAACAGGTTGG GACATCAAAGGTTGAGGTTCACCATTCATAGGTGGTGGTGGTCCATAACG CCCTTGGGGTGGGCCAGGCGGTGGTCTCGGTCCTCGGTTCATGGGCGACA TTCCTGGAACAAATCGGAGAAATAAGTGTAAGTAGATGAGGGTGAAAAAT TCACGGTCTTCAAAGTGCTAGAATAATGAATTGTGCTGGGATTTATCTGA TATGGATTTAAGACATGCATTGCAGGTGTAGGTAGAACTGGTCATTACTC TCGGGTGCGTGTCAAATTTACCACCTGTACGCACCTTATTAGGAACTGTA CGTTTATTTATTCTGAAGAATTTTCCCGCCTGTACGTTTATTCCCTCCTG T

Coding sequence (CDS) from alignment at sc0001520:9189..14989-

>TCONS_00036823 ID=TCONS_00036823|Name=TCONS_00036823|organism=Clytia hemisphaerica|type=CDS|length=3525bp|location=Sequence derived from alignment at sc0001520:9189..14989- (Clytia hemisphaerica)
GAAATACAAGAGCCAATCATCACTGTGTGTCAGGAAATAAATTTCTTCAA
CGAGTTCGAGAAAGTAAAACAGAAAATTTTCTATCATGAATGCCCAGAAG
ATCTCCGACGAACTCATCAGGCACGAATGTTATTAACCAAGGTTCAAAAT
CACCAGATCTGAAAAAAGTTGTGAAAACCACTTCTTCAACATTTGATGTT
ATACGTAAAGAATCCACATTTACTTGGTATTAGCCAGACACATAGAGCAA
TAGGGTTTCACCAAATGAAGGGTTCTAACATGCTGCAGTCGTTATCTCAC
AATAATAACAAAAGTTTCAGCGGGAAAAAAGATCTATTGCCTTGTATTCA
ACGAAGACCCTATCCTTCGCAGCACAAAAATCAATTCGTGATTGGAGATA
AATCAATGGCAGCTTTTACAGAACATCCTAAACGATTCAATTTTGCTACG
ATACAACAGATGGCTCTTTCTCAAATAGGTCAGGGTCGTGTTACTACAAC
AGCACTCACAAACCACTCAAGATACCTGACAATAATCGATGATGAAAAGA
CGGCGCAGCACAAGAAAAAGACATTTCTTTGCGAACAGCAACAGCAGGAG
AATCATAACATCCAAAAGAAAGGAACACGGTTGATGCATACGACCACTTT
AATCTTAGGGGATAAATCGAACATCACTCAGGAATACCGTTCTAATACAA
AACATGAAATACAAGAGCCAATCATCACTGTGTGTCAGGAAATAAATTTC
TTCAACGAGTTCGAGAAAGTAAAACAGAAAATTTTCTATCATGAATGCCC
AGAAGATCTCCGACGAACTCATCAGGCACGAATGTTATTAACCAAGGTTC
AAAATCACCAGATCTGAAAAAAGTTGTGAAAACCACTTCTTCAACATTTG
ATGTTATACGTAAAGAATCCACATTTACTTGGTATTAGCCAGACACATAG
AGCAATAGGGTTTCACCAAATGAAGGGTTCTAACATGCTGCAGTCGTTAT
CTCACAATAATAACAAAAGTTTCAGCGGGAAAAAAGATCTATTGCCTTGT
ATTCAACGAAGACCCTATCCTTCGCAGCACAAAAATCAATTCGTGATTGG
AGATAAATCAATGGCAGCTTTTACAGAACATCCTAAACGATTCAATTTTG
CTACGATACAACAGATGGCTCTTTCTCAAATAGGTCAGGGTCGTGTTACT
ACAACAGCACTCACAAACCACTCAAGATACCTGACAATAATCGATGATGA
AAAGACGGCGCAGCACAAGAAAAAGACATTTCTTTGCGAACAGCAACAGC
AGGAGAATCATAACATCCAAAAGAAAGGAACACGGTTGATGCATACGACC
ACTTTAATCTTAGGGGATAAATCGAACATCACTCAGGAATACCGTTCTAA
TACAAAACATGAAATACAAGAGCCAATCATCACTGTGTGTCAGGAAATAA
ATTTCTTCAACGAGTTCGAGAAAGTAAAACAGAAAATTTTCTATCATGAA
TGCCCAGAAGATCTCCGACGAACTCATCAGGCACGAATGTTATTAACCAA
GGTTCAAAATCACCAGATCTGAAAAAAGTTGTGAAAACCACTTCTTCAAC
ATTTGATGTTATACGTAAAGAATCCACATTTACTTGGTATTAGCCAGACA
CATAGAGCAATAGGGTTTCACCAAATGAAGGGTTCTAACATGCTGCAGTC
GTTATCTCACAATAATAACAAAAGTTTCAGCGGGAAAAAAGATCTATTGC
CTTGTATTCAACGAAGACCCTATCCTTCGCAGCACAAAAATCAATTCGTG
ATTGGAGATAAATCAATGGCAGCTTTTACAGAACATCCTAAACGATTCAA
TTTTGCTACGATACAACAGATGGCTCTTTCTCAAATAGGTCAGGGTCGTG
TTACTACAACAGCACTCACAAACCACTCAAGATACCTGACAATAATCGAT
GATGAAAAGACGGCGCAGCACAAGAAAAAGACATTTCTTTGCGAACAGCA
ACAGCAGGAGAATCATAACATCCAAAAGAAAGGAACACGGTTGATGCATA
CGACCACTTTAATCTTAGGGGATAAATCGAACATCACTCAGGAATACCGT
TCTAATACAAAACATGAAATACAAGAGCCAATCATCACTGTGTGTCAGGA
AATAAATTTCTTCAACGAGTTCGAGAAAGTAAAACAGAAAATTTTCTATC
ATGAATGCCCAGAAGATCTCCGACGAACTCATCAGGCACGAATGTTATTA
ACCAAGGTTCAAAATCACCAGATCTGAAAAAAGTTGTGAAAACCACTTCT
TCAACATTTGATGTTATACGTAAAGAATCCACATTTACTTGGTATTAGCC
AGACACATAGAGCAATAGGGTTTCACCAAATGAAGGGTTCTAACATGCTG
CAGTCGTTATCTCACAATAATAACAAAAGTTTCAGCGGGAAAAAAGATCT
ATTGCCTTGTATTCAACGAAGACCCTATCCTTCGCAGCACAAAAATCAAT
TCGTGATTGGAGATAAATCAATGGCAGCTTTTACAGAACATCCTAAACGA
TTCAATTTTGCTACGATACAACAGATGGCTCTTTCTCAAATAGGTCAGGG
TCGTGTTACTACAACAGCACTCACAAACCACTCAAGATACCTGACAATAA
TCGATGATGAAAAGACGGCGCAGCACAAGAAAAAGACATTTCTTTGCGAA
CAGCAACAGCAGGAGAATCATAACATCCAAAAGAAAGGAACACGGTTGAT
GCATACGACCACTTTAATCTTAGGGGATAAATCGAACATCACTCAGGAAT
ACCGTTCTAATACAAAACATGAAATACAAGAGCCAATCATCACTGTGTGT
CAGGAAATAAATTTCTTCAACGAGTTCGAGAAAGTAAAACAGAAAATTTT
CTATCATGAATGCCCAGAAGATCTCCGACGAACTCATCAGGCACGAATGT
TATTAACCAAGGTTCAAAATCACCAGATCTGAAAAAAGTTGTGAAAACCA
CTTCTTCAACATTTGATGTTATACGTAAAGAATCCACATTTACTTGGTAT
TAGCCAGACACATAGAGCAATAGGGTTTCACCAAATGAAGGGTTCTAACA
TGCTGCAGTCGTTATCTCACAATAATAACAAAAGTTTCAGCGGGAAAAAA
GATCTATTGCCTTGTATTCAACGAAGACCCTATCCTTCGCAGCACAAAAA
TCAATTCGTGATTGGAGATAAATCAATGGCAGCTTTTACAGAACATCCTA
AACGATTCAATTTTGCTACGATACAACAGATGGCTCTTTCTCAAATAGGT
CAGGGTCGTGTTACTACAACAGCACTCACAAACCACTCAAGATACCTGAC
AATAATCGATGATGAAAAGACGGCGCAGCACAAGAAAAAGACATTTCTTT
GCGAACAGCAACAGCAGGAGAATCATAACATCCAAAAGAAAGGAACACGG
TTGATGCATACGACCACTTTAATCTTAGGGGATAAATCGAACATCACTCA
GGAATACCGTTCTAATACAAAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021751XLOC_021751Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036823-exon-sc0001520-1575043694:14573..14989TCONS_00036823-exon-sc0001520-1575043694:14573..14989Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1575043694:13618..13764TCONS_00036823-exon-sc0001520-1575043694:13618..13764Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1575043694:11930..12031TCONS_00036823-exon-sc0001520-1575043694:11930..12031Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1575043694:10301..10421TCONS_00036823-exon-sc0001520-1575043694:10301..10421Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1575043694:9189..10026TCONS_00036823-exon-sc0001520-1575043694:9189..10026Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1510915933:14573..14989TCONS_00036823-exon-sc0001520-1510915933:14573..14989Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1510915933:13618..13764TCONS_00036823-exon-sc0001520-1510915933:13618..13764Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1510915933:11930..12031TCONS_00036823-exon-sc0001520-1510915933:11930..12031Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1510915933:10301..10421TCONS_00036823-exon-sc0001520-1510915933:10301..10421Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1510915933:9189..10026TCONS_00036823-exon-sc0001520-1510915933:9189..10026Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1491911889:14573..14989TCONS_00036823-exon-sc0001520-1491911889:14573..14989Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1491911889:13618..13764TCONS_00036823-exon-sc0001520-1491911889:13618..13764Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1491911889:11930..12031TCONS_00036823-exon-sc0001520-1491911889:11930..12031Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1491911889:10301..10421TCONS_00036823-exon-sc0001520-1491911889:10301..10421Clytia hemisphaericaexon
TCONS_00036823-exon-sc0001520-1491911889:9189..10026TCONS_00036823-exon-sc0001520-1491911889:9189..10026Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036823-proteinTCONS_00036823-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001520supercontigsc0001520:9189..14989 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.5781 1.60577 0.925003 0.770584 30.5198 20.5504 26.8103 26.9027 16.2637 20.7894 21.2265 29.2857 3.5444 4.04716 1.44839 1.90152 1.51324 1.91512 3.47874 1.6446 2.03483 2.12742 2.06294 1.96526 56 33.15 3.34353 5.14319 0.95366 1.29413
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036823 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top