XLOC_021307 (gene) - C. hemisphaerica

Overview
NameXLOC_021307
Unique NameXLOC_021307
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001428:37401..40823+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021307 ID=XLOC_021307|Name=XLOC_021307|organism=Clytia hemisphaerica|type=gene|length=3423bp|location=Sequence derived from alignment at sc0001428:37401..40823+ (Clytia hemisphaerica)
tcttaaatttttatatatttcaggaagaagaaaaacaaaatataatcaaa
acaaaacatgatGTATGAAATTGAGCCACATCTTTATCTCTCGAATATCA
CTGCTGCAAAAAATCAACAATTATTGCAACAAAACATTATCTCCATAGTC
TTAACAGTTGATGCTCAACCTCTAGGAGGTAGTGGTGgtgaaatagaaaa
tatttatattGAAATGAATGACGACCTGAAAACGAATTTGGTTGAGAAGC
TACCTCAATGTATTGATGTGATTGAAGACTGTGTTATGGAGAAACGCAAT
ATTCTAGTACACTGGTAAAGACTAACGCATTTTAAATCTAGATGTAGTTT
AAAAACGCCATAGTAAAGACTAATCtccttttattcaaatttgtctTTGT
TCGTTTCAAAGAAGACTGGTGCATTTCGTTTGATGACTCTCTTAATTGCG
ATCTCGTCAAGCTTGTTGAAGTAAATGAAGAAGAATACCTTGTCGGCCAG
TGTCGgcaaaagttgtttttttgcaaaaaattcaaatgagCCTAAAATGG
AAACTTGCATTTCCCTCTCATTAGcttcttttaaaattctttgtcTAGGT
AGCACATAAACCCAAAATTTAATTTCAGCGAAATAATGTTCAATTAActa
attccgtcactttttactGGCGAGTTTTCCACTGATTTCCAACTTTCAAA
ACCTTCCTTTTGTGTTTTTCAGTCATGCTGGTGTATCACGAAGTGCATCT
GTTGTTATCGCTTACGTCATGAAGTCACGTGGCTTATCATTACGTCATGC
TTCGGATCACGTGAAAAGCAGAAAACAAGACGTCATGTATGTCGAATCAC
TAACTCTCCATTTTTTAAGTAGGCTATAATTACCTCGTGAAATTATGCTC
CATCAAGCTACAGTTCCCAAATCATTTCTTTTCGGTTTTAAACAAGATAT
ACGAAAGGAAagtattgatttttcgaagatgaTCGATAGTGAACAAAATG
GTCGGACTGACCATACAACTTTAAAGAACACTTGACAACTTTTGCAACAT
TATTAGAAGCCAGTATTTTTTAGAACCGATTTGCTTTTactcttttttta
actttcaggCCAAACCCTTGTTTCATGTACCAACTGCAGGTTTTTGAGAA
GATGGGATGTAAATTGGAGAAGGaatctactttttataaagAATTGATGG
TGAAGTTCGATCAACAAGAAAAAATCAGTAATGAATGCGTTCTTTCTTGT
CTGTTATTCTTTGTCACAACAATGAAAAATTCCATCAACGATTGAGAATA
TATAGTGAAGAAGGTTAGGATGTCTCATTTTGAACTTTCCAAGAAGTGCA
AATTGCGTACCATGGAGTTATATAGGTTATCCCCCAGTTTTATGACAATC
TATCTTGGTTTAATGAACTCTTTTCTAGGTCAAGCGATAAATGCTGGTGA
TTATTGGTCCATCAAAGAGCAGGAAAGTGCTTCAAACAATAACAAAGAGA
TCAAGAAAAGGATTACTTATAAGTGTCGCTCTTGCAGGTattataataat
ttattttgtttttttataccCATCGGGCTGTTTTTATTGACTACTATTGA
TGACTGGTggcataaaatttcaaaaaatttaatcaaGTCATACattgttt
tccattttttcctTCGTAGAATCTTGTTGTTCACATCAGAAGCCCTAAGT
GAAGACCACGCGGAAAATGCCAAAGAATGTACTTCACTTTATTTGCTTGA
ACCGCtagattggatgaaaaaagccATGAATGCTGATATCCAAGGAAAGG
TACTGACCCTCGTGTTTTTTTCATNNNNNNNNNNNNNNNNNNNCTGGTgg
cataaaatttcaaaaaatttaatcaaGTCATACattgttttccatttttt
cctTCGTAGAATCTTGTTGTTCACATCAGAAGCCCTAAGTGAAGACCACG
CGGAAAATGCCAAAGAATGTACTTCACTTTATTTGCTTGAACCGCtagat
tggatgaaaaaagccATGAATGCTGATATCCAAGGAAAGGTACTGACCCT
CgtgtttatttcattattttgctTTAATTGAGGATAtgatataatatttt
ttccaGACAACAATTTAAGAGGTTGATATATTACAAAGATGGTATTTTCA
GAAGAATGAACGTATTTAACTATCGCAGAAGCAACTAGGGTCTTGATATT
TAAACAGCAAAGTAAAGCTGTCTTTATGTCGGAATTTTTGGAGAAACAAT
GAAACGATCTCTTATTTTCGCTTTTTTAGATCAATTGCTTTAAATGCAGT
GGAAAGCTTGGAATGTTCAACTGGTCTGGTAGGTTAAACTTTAGGTTAAA
CTTTCAATTTAGCATTTTCAAGGGTGTAGAACCTCAAAATCCAGCAGCCG
GAAAAAGAGCTGGCcgcattacttcgaataaacgccccgggcgtttgtta
aattttttggattttaggaggggcgtttaaaatagggggcgtttattcga
agcaATACAGTATACAgtcttttgacatttttcggctaactttgaaaaat
tgacttgCATTCATAAAGCGGACCACTGCTGAACCGAAATAATCATACCG
GGGTGTACCAGAAATAAATGACCATCCTTGAAGTAGAATTTTTTTAGCtc
catttgaagaaaaattaaagtatttctggcacacccggtattttgatcaa
attttagaTGTTTTCACCTATCCAGCATGAAAACTATCCCAAAACATAAT
CTATAATAACCTAAAATAAATGCCACAAGGTAGTACTTAGATATTGAGTT
AAATCGCCAACGAATGGAAAATAGTTGTTGTTTCCTGCGCTTGTAACTTG
CTTTTTTTAAAACGTCAAGTTCCAAATATACAAATATAAAAAAGCCCGTC
TTGTTTGAATAAATTAAATCAATTCGATTGTGATGATAATCAATCATGAG
ATACAAGTATTTTGCTCAAAAGTACAATTGGACCATTTTCTTTCACTACT
AGGTAGAACATGTTCTTGTGGTATGTGGATTACACCATCATTTCAAGTTC
AGAAGTCACGAGTCGACCATTCGTTCCCAAAGTAATGTTTTTACAGTCAC
CAAGTTTAGTGCTACGATGAACACGTTCCGTGTACGTCACGCCAAGCCAC
TTCAAGGTCACCTGTGATAGCGTTTGTGGACGAAGGAAATATCCCGTGGG
TAACAGTAAGAGTCGATCTTTTCGACGTAATATAAAATGTCGAACTTTAA
ACGTTGTGGTATAAAAGAGCAGAATTCGTAAACGAGCCAAGGTGCATCAG
CTTGGAGTAAGAGTCTTGTGATAACGTAAGAAGACATTTGTAAATCCTTC
CTGTACAAAGGTAAACATAGAATGattcaaatcaaatttaaatGTACTTA
ATTACTTTTTAAGGTCCTTTTCg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036223TCONS_00036223Clytia hemisphaericatranscript
TCONS_00036224TCONS_00036224Clytia hemisphaericatranscript
TCONS_00036225TCONS_00036225Clytia hemisphaericatranscript
TCONS_00036226TCONS_00036226Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036225-proteinTCONS_00036225-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001428supercontigsc0001428:37401..40823 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DUSP12dual specificity protein phosphatase 12 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.78	10.71	4.49	3.38	8.36	7.15	5.83	7.86	9.05	5.59	5.66	7.14	4.66	4.38	3.56	3.1	4.41	5.58	1.22	1.77	4.26	3.4	9.32	7.81	29.34	23.86	2.32	1.43	4.02	4.98