XLOC_020995 (gene) - C. hemisphaerica

Overview
NameXLOC_020995
Unique NameXLOC_020995
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001362:50754..57007-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020995 ID=XLOC_020995|Name=XLOC_020995|organism=Clytia hemisphaerica|type=gene|length=6254bp|location=Sequence derived from alignment at sc0001362:50754..57007- (Clytia hemisphaerica)
CAAGGCCTGCTAACTTCACAAGAACAAATTTCGATGAAAGGTCCACAAAC TGCACAAGAACAAATCTTGAAACCACGCACAACAACAAAAGACAATAATA TCAGATTCAAAAACTCGTCCACGAAGAGTGGAACTCTTCCAAACTCTAAT GGCAATAGTAGCAACCCTTAAGGTAACCTTTAATACAGTAAATCTATCAA AAGGATTCTTTCCTATTTTTTATGTACACTCTTACGCCATAGCAGTCAAG TATCATTGTTTCTCTATCATTCACTAAATATTGTAATATTGAAATCATTT TCATTTGCAAGGTCTACAAAATTCACAAGAACAAATTTCGAAACCACGCA CAACAACAAATGACGATAATATCAGAATCAAGAACTCATCCACAAAGAGT GAAACTCTTCCGAACTCTAATGGCAGCAGTAACAAACCTCAAGGTTCCCT TTAGTACTGTAAATTTATCAAAGGAATTCTCGCGTATTTTTCTATGGACA CTCCAACACTATATCAGACAATTATTATTGTTTCTCTAAATTTCTCTAAA TATTGAAATTTTTGAAATTTCTTATATCAAAGGTCCTCAAACATCAAAAG ATTCGAAATTGAACAAACTTACAGATAAGGACAGATTATTCACATCCAAC AACACATTCTTAAATTCATCTTCGAAAAAAGAAATTTTTGTTAAACTAGT GGGCGTTGAAAATAAGAGTCATGGTAAGTATTATTGTTTGTTAATTTTTA TTACCAGAAATAATATTTAAGCACACACTCTTGGTATACTCAATAGTTAT TGCCTTATAATTACTGCTGCACCTCTTAGTAATTTATTCGTAAAACTTCT ATATTCATTATTCGTTGCTAAACTTCATCAAGCCCACAAAAGTTCAACAA TTAGCAAGCAAAACAACGAGCCAGAAGAAAATAGAATTGCCTACGACAAT ATAATCTCAAGTAGCGACTCTCATATCTGATTTATCCATCATTTTAATTA CTTACATATTTCTCTTTCAAACATAAAACATTGAAAGATTTCAATCATTT GTATTTACAGGTCAGAAAGCAGAAAAACCTGGCAAATCCAGAGACGACGA CAAAATCAACTCAATGAATCCTCCTTCATCTCAAGGTATAAAATTAAATT AACCTTTACATATACTACCAAAATTTATACGATAATATCACGACTAATCA AAAATATTAGTATATTCTAATTAAGATTCTTGATAAACAACCAGGCCCAA ATCATGAAGACATAAATTTCTTCCGAATGGCGCAAACCATGGTCATGTCC TATATACACAACGATAAGTAACGATAAATCTTTTAATAATTCACTATCAT TCGTACAATTACAAATTCTTTCTCATTAGAAAAATGGAATGTTTCTATCC TTCACAGTTCCGGTAAACCCAAAAAGAAACATATTTTGCAAACTAAAGGT AACTTTATTTTCTTATCGCCTCAAAATTTTAAAGAATGCACATGTTTTTG CAAGCACAATATTCATTTGTTTCAGTAGATTTTCTGTCTAAGTCAATGAA AAATATATATACTCGTTTTAAAATATTTGATATGTAATAATTAGCTTTTA CGCGAGGAAAATAGCCAGAAAATGTGGAACGAGTGACATATTTCCATATT GTACGAGCAAATGTCTGATAACTGGTTTATCGGTGACACAAAAATGCACT TTTAACTTTGTGTCGGAAGAAAGCGCAGGGTACTTTTAGCAAAGTGACGT TAGATTGCTGCTACCGCTACAATGCAACAACATCTTTTTGTCAATTTTTA CATGTAAAATAGAAGATACTTTGTACTCTTTTTAAACAATTAGATTACAT ATATTTTTTGGATCGCCGATACAATACAATGGATCATCGTCTGATTCAAG CTCGGAAGAAGATATATGTAAGTATTTTTATCAAAAGTAATAAAGGGCCA ATCATCATTTTCTAAAAATGCTTCATTGTATATAAATCAGATACCACTGA TAAGATAATTAAGAGTACTCAATTCCATTTGAAAATGGAATTACTTTTGT AAATGGGAATGGACGATCAAAAGCATTCAAATACTGAAAAAACTTACCAA TTTGGTTTTAGATAAAGAACCCGAACTGGATGAAGGCTTCGCGAAATTTA TTGAAAGAGACAATGCCATACTCCGCTTATTAGAAGAAAACAAACAACAA ACATCCCAGTCAGAGAGGTTCAAAGTGTTTACCGGAAAGGGGACCTCGCT TAACAGATATAAAGCTGATGCACTGCGTGAATTTCACTACATTGGGATGG ATGACAGCCAAGTAATACAATGCGAAATTGACAAAAATGATCTGTTTGGT TTGGAAGGATACGAGCGAATTCCAATCTCATTCCAAAGGGGAAGCTACTT TGATACAGTAGAGTACCAATTCGTGCCAGAAATCTACACCTACTATATAA TGGATAAAAGAAAACTCACTTATAAACAGGCTACTTCATTTATGTGCGGG AAACATCAGCCAACGGCATATCACGTAAGCAAGCTCAATCAGGTAAGTCA TTTAACTCATAGCTAGCTAGCTAGCTATAGTTTTACTATACTTACCATTT AGTATACATATTTTTTTACAAGCAAGTGTCTGTCTCAGTCAGGCTAGTGT ATGCTTAAGTTCTCAAAGCATCCAGGCATAGGTTAGGCTTATGCATGCTT ATGATTCACCCGAGCCAAGTTTTTAGTGAAAATTCAGACATTTTGTTAAA TTTGTTCAGATTTTGAGAGCCGTGGAATCAGTAGCGGCCTGGCTTAATTT TCATGGTGGTGCAAACTATGAAATTGGCGCCCCTGGTATTTTTGTCCTTA TTTGCGCCCTCCACCATAAGTGAAAATATTAAACTGTAAGAGCAGTGACT GGTTGAAAGTAACGCCCAGAATCTCTGAGTTAACAAACTTTTATTTATAC GAAGGTGGTGGTAATGATAACTTGATATCTATTTCCTTGTTATTTCCTGG TCTTACTTTACTCTCCATTAAAGATCAGTGGCTGAAAGAGGCCCCGAAAA TTCGAAAGTTGACAGGAATAAGGGTTCTTTGTAATACGGGGGGGTTTGTA CTTTTACGGTGTGACGGGATTGGCCCTTTTTTAGTACGGTATTACGGGAT TTGACGAAAATAGAGACGGGAAAACGGTATTTTAAAATTAGACGGTGACG GTATTTAGGTACATTTTTGCCATGTACAAGCCGGTGTGAGGATGTTATTA TTTTTTCAATTTTCGGGATTCCGAGATTCAGCCCAAATTTTGACGGGAAA ACGGTATTTCGAACCCCTACAACCCCCCACCCCCCTGCAAAAAAATTTGG TGTAAGAGAGGTCAAACAGCTTAAAAGATATTCTAAAAAGGAGAAAGTCC GCATAAGACCAAAAAAACCACAGCGAGCAGTTTCGATCAATCTCTCATTT TGGGGGTTAGCATCCTCTTTAACCCCTGGTGGATACACAACACTTCTCTT AATTTGACTTTCGCAATTCAATGTTGATAGTAGAAAAAATTCGTAAAAGA GAACGAAGCGCCGCAGGCGAAAAAAAAATTACATTGCACTTATAGAAGGC GCTAAAAACGTGTCAAAAGGGCGCCAAATCGCCCAACCAAACATCAAAAA AAAATTTGGCGCCCCCTTGAAAAGCTTTTTTGGCGCCCCTCTCAGGTCTT TCTGGGTGGTGCACTGCACACCCTGCACCCCCTGCCAGGCCGCCACTGCG TGGAATGCTTTTTTTTACTTTACCTCTACCAAGCCTTTTTAAACAGATAA AAAATGACAAATTGAAAAATATTTCAGGCTAGCGTATATGCTTATGTTTT ACTTAGGAATTCTGCAAATCTGAGCCTACATATGCTTTTAAGCGTTGTGC TTATAAAAAAACATATAACGCGTAAGCCCTAATCAAGGCACGCTCTTGTT CTGCCGTTTCATATACAAGTTTTTTTTATAATAACATCCAAGTTTTTGAA GCCTTATGTTCTTAACTTTTTGAGTCCTAAAGCCTGAAAATGTTTTCAAT TGTTCTTATTTTCACCATTTTTCTAAGGAAAAGGGTGTTTTAGAGTCTGC AAAGCCTTAAAATGTTCTTTGTTCTTAATATTTTTTGCTATTAAAGCTTT TATGTGCTTGTTTAGCTTGTTCTTATAAAGGAAACGTGCACAATGCAATT TCGTAATTGCCGTGTGAGCATTTGTGTGATGAGTGGCGAAGGGCCTTGTA TATTCATTGCTTTTATAATTTGTTGAATGTTTTAGGAATACAATTGTCAG CGAATGGGTTTTAGAACTCTCTGTCTTTTAAACGGGTTCATTTTTTAATT CATTTCAATTTAATGTTCAAAGTTTGATTGATTAAACAGGTAGGTTCATA AAGTTTTATTTAATTATTAGTAAAAGTAAACTTAGCTCACATCACCTTAT CCGGAAATCTATAGTTGTAATAAAGTCCTATTCGTTCCTATAATTTATGA TCTAGCTTTGACTTTGAGCTTGGCTTTCTAGGAGAAAAAAATCACAAAAA TTGCCGGTTCTAAATCGAATCTAGAATGGTAGGTGTTGATATCTGCCAAG TATTTGTTTTTTACTTCTATCGTCTACTTATTAAGGTGAAATCATCTTTA GTTTGTTTTAGGAGGAAGTCTATGCGCGAGTAAATTCAACAGTTGATGGT GGCATCTTAATACAATGTAGGTGTTATTTACTTTTGGAAATCTTATTTTG GAAAATAGTGTTCGTGATGAACAAACGGGATGTACTCTTTCGCGTCTGCT TTCCATCAGGATATTTGCAAATATCTGACGACCTGCTTTTGACAGAACCC TCTAATATTAACGACTCCTATATATGCTGACCACAAGATTTGGACGTGTT ATGGAATAGCCTGACATAATATCGCTACTAATTTTATTTTTCCTACTTAT TCCTTCAGCTTCCCTTGAAGAGATTTTCGGTCAAGGAACAGATGGGATTG TCATCAGAACAGATAGCGAAATGATTCCAATCAATTTGGTGAGCAATTTT TTTGCACGTTTGGACTAAAAATCTTATATCCAAATAAGTTAGATCTCTTT GACAAAATTATACACCATGATATCAGTTGAGCAGTATGTTCGATTTGAAC ATCATGAGTCAGCTTTCCTATTATGTACATAGCAAATTGTTATTATGATT TAGTGCAACTTTGTGTCTTGCTTTGTGTCAAGCAAATAACTAACTATTTA ATAATTATTCCAACACAACGAGTTATTTTTTTTATTTCAAGAGGCATCAT TGTAAGACGGCTTTAGGCATTACAAGTCATAGGAAAAATGATATTTTATA ACAGGCAGAACAAAATATCAACAAATATAGCTTTGGCTTTTTGGCAGCAA AATGAAGAATTATTCAAGTATTTCTATTTTAATTTCACTCAAAAGAAAGA TTCGCAGCTATCAGGAAAATTTTGTTATGACAAGATCACAATCAAAACTT GAATTTGTTCAAACAATAAATATCACAAATTTGTCAAAACTTATTCTGTG ATTTGATTTGGCTGCAAAGAATTGCTCTATATGCAAAATATCACTAATAT CCCTATAACGTAAATAATCAATCATATGTGATAACAACCTTTCTCTTTCT CGTCGACCTACGATTCCCGCTTTTGTTGACTTCGGGTTCACAAACAACTA CTACTTTACCATCAATGGTATTGTTGCTTGATAGATTTTTTACATTGTCA ATGGTTTTGGCTTCATTAATTTTGAAAAAATCCTTTTTTAGTGGCTAGTA CAATATTTGTTTACGAAATCATTTACGTATTTTCGTGAATCGTCCATCAG TTTTAACCCTTCTTCGACAAGTAAAAGGTCGACCTCGCTAATTATGTCTC TGGATGGCATTTTCAATACCACTGTTTTTTCCGTAAAATAATCATTAATG CTTTCGTACTTTGAAAGAATAACGGTGATATTGCTTGCATTAGCTGAATT CAGAGGCTCGGGTTGTTTATATTCGATCTTCTTTTTTTCCTTCAGGAATA CCATACGCTTGACTCTACCAACAAAGAAGCTTTTCTTGTTCCTATCGAGC ACTGCGTAATCATTAAAGAGACATACTGATGTACTAGAACGAACGTTTGA ATTTACCAGGGAGTCTTTAGTATTGTATTCGTGTCGTTGGCGTACTCGCT TTAACCTGAAGTGAAATGAAATAAAATCAAATACATGCTGATAATATACT GACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035785TCONS_00035785Clytia hemisphaericatranscript
TCONS_00035784TCONS_00035784Clytia hemisphaericatranscript
TCONS_00035783TCONS_00035783Clytia hemisphaericatranscript
TCONS_00035782TCONS_00035782Clytia hemisphaericatranscript
TCONS_00035781TCONS_00035781Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035781-proteinTCONS_00035781-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001362supercontigsc0001362:50754..57007 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43 0.5 0.24 0.23 4.05 2.58 2.4 3.92 3.73 2.41 2.56 6.69 5.32 4.93 7.5 6.7 4.5 5.14 8 6.53 4.18 3.52 2.91 2.61 1.69 3.07 2.47 3.2 1.48 1.51