|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035783 ID=TCONS_00035783|Name=TCONS_00035783|organism=Clytia hemisphaerica|type=transcript|length=122bp
ATCACGTAAGCAAGCTCAATCAGCTTCCCTTGAAGAGATTTTCGGTCAAG
GAACAGATGGGATTGTCATCAGAACAGATAGCGAAATGATTCCAATCAAT
TTGTGCAACTTTGTGTCTTGCT Run BLAST on NCBI transcript from alignment at sc0001362:51786..54488- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035783 ID=TCONS_00035783|Name=TCONS_00035783|organism=Clytia hemisphaerica|type=transcript|length=2703bp|location=Sequence derived from alignment at sc0001362:51786..54488- (Clytia hemisphaerica)
ATCACGTAAGCAAGCTCAATCAGGTAAGTCATTTAACTCATAGCTAGCTA
GCTAGCTATAGTTTTACTATACTTACCATTTAGTATACATATTTTTTTAC
AAGCAAGTGTCTGTCTCAGTCAGGCTAGTGTATGCTTAAGTTCTCAAAGC
ATCCAGGCATAGGTTAGGCTTATGCATGCTTATGATTCACCCGAGCCAAG
TTTTTAGTGAAAATTCAGACATTTTGTTAAATTTGTTCAGATTTTGAGAG
CCGTGGAATCAGTAGCGGCCTGGCTTAATTTTCATGGTGGTGCAAACTAT
GAAATTGGCGCCCCTGGTATTTTTGTCCTTATTTGCGCCCTCCACCATAA
GTGAAAATATTAAACTGTAAGAGCAGTGACTGGTTGAAAGTAACGCCCAG
AATCTCTGAGTTAACAAACTTTTATTTATACGAAGGTGGTGGTAATGATA
ACTTGATATCTATTTCCTTGTTATTTCCTGGTCTTACTTTACTCTCCATT
AAAGATCAGTGGCTGAAAGAGGCCCCGAAAATTCGAAAGTTGACAGGAAT
AAGGGTTCTTTGTAATACGGGGGGGTTTGTACTTTTACGGTGTGACGGGA
TTGGCCCTTTTTTAGTACGGTATTACGGGATTTGACGAAAATAGAGACGG
GAAAACGGTATTTTAAAATTAGACGGTGACGGTATTTAGGTACATTTTTG
CCATGTACAAGCCGGTGTGAGGATGTTATTATTTTTTCAATTTTCGGGAT
TCCGAGATTCAGCCCAAATTTTGACGGGAAAACGGTATTTCGAACCCCTA
CAACCCCCCACCCCCCTGCAAAAAAATTTGGTGTAAGAGAGGTCAAACAG
CTTAAAAGATATTCTAAAAAGGAGAAAGTCCGCATAAGACCAAAAAAACC
ACAGCGAGCAGTTTCGATCAATCTCTCATTTTGGGGGTTAGCATCCTCTT
TAACCCCTGGTGGATACACAACACTTCTCTTAATTTGACTTTCGCAATTC
AATGTTGATAGTAGAAAAAATTCGTAAAAGAGAACGAAGCGCCGCAGGCG
AAAAAAAAATTACATTGCACTTATAGAAGGCGCTAAAAACGTGTCAAAAG
GGCGCCAAATCGCCCAACCAAACATCAAAAAAAAATTTGGCGCCCCCTTG
AAAAGCTTTTTTGGCGCCCCTCTCAGGTCTTTCTGGGTGGTGCACTGCAC
ACCCTGCACCCCCTGCCAGGCCGCCACTGCGTGGAATGCTTTTTTTTACT
TTACCTCTACCAAGCCTTTTTAAACAGATAAAAAATGACAAATTGAAAAA
TATTTCAGGCTAGCGTATATGCTTATGTTTTACTTAGGAATTCTGCAAAT
CTGAGCCTACATATGCTTTTAAGCGTTGTGCTTATAAAAAAACATATAAC
GCGTAAGCCCTAATCAAGGCACGCTCTTGTTCTGCCGTTTCATATACAAG
TTTTTTTTATAATAACATCCAAGTTTTTGAAGCCTTATGTTCTTAACTTT
TTGAGTCCTAAAGCCTGAAAATGTTTTCAATTGTTCTTATTTTCACCATT
TTTCTAAGGAAAAGGGTGTTTTAGAGTCTGCAAAGCCTTAAAATGTTCTT
TGTTCTTAATATTTTTTGCTATTAAAGCTTTTATGTGCTTGTTTAGCTTG
TTCTTATAAAGGAAACGTGCACAATGCAATTTCGTAATTGCCGTGTGAGC
ATTTGTGTGATGAGTGGCGAAGGGCCTTGTATATTCATTGCTTTTATAAT
TTGTTGAATGTTTTAGGAATACAATTGTCAGCGAATGGGTTTTAGAACTC
TCTGTCTTTTAAACGGGTTCATTTTTTAATTCATTTCAATTTAATGTTCA
AAGTTTGATTGATTAAACAGGTAGGTTCATAAAGTTTTATTTAATTATTA
GTAAAAGTAAACTTAGCTCACATCACCTTATCCGGAAATCTATAGTTGTA
ATAAAGTCCTATTCGTTCCTATAATTTATGATCTAGCTTTGACTTTGAGC
TTGGCTTTCTAGGAGAAAAAAATCACAAAAATTGCCGGTTCTAAATCGAA
TCTAGAATGGTAGGTGTTGATATCTGCCAAGTATTTGTTTTTTACTTCTA
TCGTCTACTTATTAAGGTGAAATCATCTTTAGTTTGTTTTAGGAGGAAGT
CTATGCGCGAGTAAATTCAACAGTTGATGGTGGCATCTTAATACAATGTA
GGTGTTATTTACTTTTGGAAATCTTATTTTGGAAAATAGTGTTCGTGATG
AACAAACGGGATGTACTCTTTCGCGTCTGCTTTCCATCAGGATATTTGCA
AATATCTGACGACCTGCTTTTGACAGAACCCTCTAATATTAACGACTCCT
ATATATGCTGACCACAAGATTTGGACGTGTTATGGAATAGCCTGACATAA
TATCGCTACTAATTTTATTTTTCCTACTTATTCCTTCAGCTTCCCTTGAA
GAGATTTTCGGTCAAGGAACAGATGGGATTGTCATCAGAACAGATAGCGA
AATGATTCCAATCAATTTGGTGAGCAATTTTTTTGCACGTTTGGACTAAA
AATCTTATATCCAAATAAGTTAGATCTCTTTGACAAAATTATACACCATG
ATATCAGTTGAGCAGTATGTTCGATTTGAACATCATGAGTCAGCTTTCCT
ATTATGTACATAGCAAATTGTTATTATGATTTAGTGCAACTTTGTGTCTT
GCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035783-exon-sc0001362-1575043694:54466..54488 | TCONS_00035783-exon-sc0001362-1575043694:54466..54488 | Clytia hemisphaerica | exon |
| TCONS_00035783-exon-sc0001362-1575043694:51970..52049 | TCONS_00035783-exon-sc0001362-1575043694:51970..52049 | Clytia hemisphaerica | exon |
| TCONS_00035783-exon-sc0001362-1575043694:51786..51804 | TCONS_00035783-exon-sc0001362-1575043694:51786..51804 | Clytia hemisphaerica | exon |
| TCONS_00035783-exon-sc0001362-1510915933:54466..54488 | TCONS_00035783-exon-sc0001362-1510915933:54466..54488 | Clytia hemisphaerica | exon |
| TCONS_00035783-exon-sc0001362-1510915933:51970..52049 | TCONS_00035783-exon-sc0001362-1510915933:51970..52049 | Clytia hemisphaerica | exon |
| TCONS_00035783-exon-sc0001362-1510915933:51786..51804 | TCONS_00035783-exon-sc0001362-1510915933:51786..51804 | Clytia hemisphaerica | exon |
| TCONS_00035783-exon-sc0001362-1491911889:54466..54488 | TCONS_00035783-exon-sc0001362-1491911889:54466..54488 | Clytia hemisphaerica | exon |
| TCONS_00035783-exon-sc0001362-1491911889:51970..52049 | TCONS_00035783-exon-sc0001362-1491911889:51970..52049 | Clytia hemisphaerica | exon |
| TCONS_00035783-exon-sc0001362-1491911889:51786..51804 | TCONS_00035783-exon-sc0001362-1491911889:51786..51804 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001362 | supercontig | sc0001362:51786..54488 - |
Blast
The following BLAST results are available for this feature:
|
