XLOC_020795 (gene) - C. hemisphaerica

Overview
NameXLOC_020795
Unique NameXLOC_020795
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001328:4721..9027+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020795 ID=XLOC_020795|Name=XLOC_020795|organism=Clytia hemisphaerica|type=gene|length=4307bp|location=Sequence derived from alignment at sc0001328:4721..9027+ (Clytia hemisphaerica)
AAAAGAACCAAGCAAAGACAAAGAAGAACAGATAGAAATGGCTGAATGGT
GCTGAATTAAAGATTACAAGATGGAAGGTGAGCAAGAACCACAACCAAAA
TGGGCTAGACTGTCAGTTGCAAACTGTCGGTGTGAGAAATCAACTATTCA
ACCACACACACACTGTCCTTGTCCGTCTTGCAAAGGAAAAGCTGTTCATC
GAAACACAGAAATTGCACATTGCAAACAATATTTAATGCTTGCCAAAATA
GAAGAAGGATCAAATCAAGTAATTGGCAATAATGATTCTGTTCAGGATGA
GTCTAATGCTAATGACAGCAATAATTCAGACGAAAACTCAGCTCTCAACC
AAAACATTTACACACCGAACACTTAATCACACACAATCACTCTACTCAAA
TACACTGTCACTTCAGCAGCAGGAGGTTTCACCAAGCACATTGACAGGCA
TATTGCAAGATGACTCGAACAACTGTCAAGGCAGCATGATTATGAATAAC
AATATAGATACTAGTATCGATGTTTCAATGTACCGTCACAATAACCATGT
AGCAGCAGCAGGACCTTCTCATGATGATGGAGATGATGGTGACTTCTCTG
TTCCTCTAAATGAATTGGATCAATCTAATAATGACAGGTAATTTAAATTT
CACACCCACATTTTGCATAAAGCTCTTCCAGTTAAGAGTGTTTAAGAGTC
CGGATATACCACAGGAAtatcagtctgggaaatcctctcaattgcatgct
tatgttccgagggcgtaagcccgtaattgcatggttataatttacgcccg
aTCCCGCCctggttgaaattgcttagggatttcaaggggttcagaattct
ctaattcaggcgaaggcatggtttaacgggcaatccatttttacgaatct
tcttctacgataaattttgagtaaaactgccctaggcttttgaaattcaa
cagagctttcggaaggaattacatgtgaaaaatataggaaattttaaagc
gtgcaattacacgcttaccgcaaaagccgtcacccgtcaatcttgcttaa
cgcttaccgcccgtttcagaacaatttcgataagcgtgtaattacacgct
taaaaattctgccattttgataaccgtgcgattgcgcgcttacggcctcg
gaacataagcgtgcaattgagaggatttcccagactgctTGCCGATTTTG
GTACCGTATGTCGTCAGTATAGGTTTTAAATTTAATCCTTCATGTCTTTG
TCATTTATTGAGCAGTAAAAAAATCAACTAACCTTCCATCATACAATCTA
GCCTTTTCTCAAACTGTTTTCATGTTGttcgtaaaaaaaaaacacgcatg
attgaattcatttggattTTTATGACTTTGGAGCGTGCATATAATTAAAT
TGTTATCGAGATCTTTTTGCTTGTAACTACCgcaacttggtctaatgttg
acacccctcctcttatttcgacaccctttttatcagctgaaattgataga
aaggttgaaactgtttttctttgcttagatGTCAGAGAGGAAtgatcctt
tttcaatcagtgattcaagctttcctattattcctatctctaaagcaGAG
TgtttagaccaacttacggtacaaaTATCACAAGATTTCAAATCGGTCTC
TCTGAAAACAGGGCAATGGGCACTTAGGATAACCAAAGGGTGATAGGTTA
TAGTTATGGTTAAGATATGTATATTGAAAAGTCAAAACTGAGAATTAAAT
TCATCAAACACTTtgtgtgaaaatttttcttctttattttcagggAAAAC
CTTATACTCTCAAATCTCATGCGAAGCCTTGTCATTGCATCTGGTATGAA
TGCCTCAATAAAAATGACAGAAGAGCTGTTGGCTTATGTTGGGGAACTTT
TGAGTCATGCTCACAATATGGAAAATTGGCCACCATCTTATGTCACTGCT
ACTTCTCTTCTTAAAAGTAGGGGCGTTTACATTGATCCTGTTCACCATAA
AGTCTGCTTTAGCGTCGATCACCCCCTTCACCACTATGTTGTTGGTATTG
ATGAGCAATGCCCACATTGTGATGTGACACCCTCAGTTGATAGATATTAT
CTTCCTATTAAGGATAAAATAAATCGTTGGTTTCTATCGGATGACATGGC
AGAAAAAATGTTAGCTCATTGGAGAGATAGAGATGTGTGGTTAGGAAAAT
CAGGAGTTAGCTATCCAGTAAATGAGATTTGGCACGGTTCCAGATTCAAA
GAATTGCAGTGGTTCTGGGACACTGATTGTAGATGGCCACTTCCACACAT
TTGTACCAATTGCCACAGTTATATCAATCTTAATGGAAATCAAAGTGAAA
CAATTGATGTAACTTGTTATCATTGTTACAAAGAAGAGACAATACAACCA
AAGTTTGTACATGGAGATCCTCGAAACATTGCTTTGATTGGCCATTGGGA
TGGGTGGAGTCCAAAATCTGGAAGAGGCTCTGGTAggttttagttatttt
tttgtccatttacTTTAGGTGCCTAATAAGCATAGGGGTTCAAATAAACA
GTCGGATAATGATTGTGGGGACACATGCATTGGGCACCTGAGACTACTAG
ACAAGTCAAGTTTCATGTTCTACAGATAGTTAATCTAGTTTGAGCCAATA
AAAACTATCCATGGAGAGGAATTCATGAGTAAACCCTTTTTGTGTGTAAT
GTAATATAATTTTATACTAAAAGATACTCATTTGTTATTGTGTGTATTAT
TGTAATATTAATCACATGATGCTAAAATTCTGTATCATCATATAATGTAA
CATTGGGAataattttctgtaattttccCATAAAACTCTTGTTGATGTTT
TTATACACGGGAATTTTATTGTAATAGGACACCAAAGATTTAAAATAAGT
CTTGGAAGATTTGTCACAAAATTTGTGACATCGATTTTCTCTAAGCTTGG
TAAATGGCACGGCACATACAAAGGATTTTATTCAAAAGATCTAATAATTG
CTCAAACCTCAAGAGTTATGTGTGTACAGGGCAATTTCAGGATCTCAATT
TCAGGTAATAATTCCCAGTAAAACCATCAATCAACAAGAGCGCCATGGCT
TGGCTATTAGCTAGTCTTAAAATTATAACTCCCAATTTCTTTACTATTAA
GGTTCCATTGAGATATCAATTGCCACAATGGAGAAGCTTCATCGTTCAAA
GAATGACCACATTTACACCACAACCTTTGTGCCAGAGCATGCTTTGCCCA
ATAAAGAACCAAATGCTTTAGATCCATTTTTGGAACCACTCATTACAGAG
TTGGAAGAACTTTTTATTGATGGTAAGTCTACTTTTGAGGCATATTATAA
ATTATACTATACTACCTTTTGCTGTTTTGTTATTGAGATACAGTTCAACT
GTAAAATCATTATGAAAATAACCAGTACCAACATTACTCATTTAGCAGTT
TATTATACCTTACCACCCAGCTCAGGAGAAAATATTATCTTACCCAAAGT
ATAATTGGACactaaagatatttaaaaacttTCGTTCTCACATGTCACCA
ACTGATTATACTCACCTACTTCACTCACCTACTTCACTCAcctaaatttt
cttataaatctCACATTTAGGACTGGAAGTTAAATATCCAATAGATGTTG
GTAACCTGAAGGCTGGAAATTGCACAATCAGATGTTTGTTAATTTGTTGG
ACAGGTGACTATCCAGCGCAGTGTCAAATTGGCAAGTTTTCTTGCAGGGG
GACATATGGTTGCCGTGTAGATAAGTGTAAAGGTTTGAAAGCTTTCAGCT
CATTTTATTTTGTGAATATCTCAGTTTGTTCATTCAAGTGCCAGAAATTG
CCATGAATTTGAAAGTATAACCAgcatcaaaatcatcattttagaCAATT
TAAATTTGACTATTATAACAGGGATataatgtatttttaatttaGAACTT
TGCACTTTGAATCTAGGATACTTGAATCTCCTTAAACCTTTTTTACAATT
CATGTTTAATCAACCTATGAAATTCTTTATTTCAGGTGAATCTGTCAATG
GTAGTTGTTAGCTTCTCTATATGTTGTTCACGATTTACCGATGGGGTaat
tattttccaaaacttgctgacgtcatcataaaatgACCCAATTTTCAAAG
ATATATTTTTAAGTCCTCACTGGTGGTACAATTACTTGCTTTATTTAGCA
GATTCAACCACTGAAGtacaagcccgaagggctagaatcgaatctctatG
GTGGGATTTGAAGCCTTCCCATCccaccaaagttgcgcggccttgagcga
cccacCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035538TCONS_00035538Clytia hemisphaericatranscript
TCONS_00035539TCONS_00035539Clytia hemisphaericatranscript
TCONS_00035540TCONS_00035540Clytia hemisphaericatranscript
TCONS_00035541TCONS_00035541Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035538-proteinTCONS_00035538-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001328supercontigsc0001328:4721..9027 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.51	0.62	0.53	0.66	2.73	1.35	0.77	0.24	0.51	1.18	0.55	0.39	0.44	0.31	0.42	0.5	0.48	0.3	0.28	0.79	0.29	0.42	0.18	0.23	0.38	0.5	0.64	0.55	0.34	0.52