TCONS_00035538 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035538
Unique NameTCONS_00035538
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1931

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035538 ID=TCONS_00035538|Name=TCONS_00035538|organism=Clytia hemisphaerica|type=transcript|length=1931bp
AAAAGAACCAAGCAAAGACAAAGAAGAACAGATAGAAATGGCTGAATGGT
GCTGAATTAAAGATTACAAGATGGAAGGTGAGCAAGAACCACAACCAAAA
TGGGCTAGACTGTCAGTTGCAAACTGTCGGTGTGAGAAATCAACTATTCA
ACCACACACACACTGTCCTTGTCCGTCTTGCAAAGGAAAAGCTGTTCATC
GAAACACAGAAATTGCACATTGCAAACAATATTTAATGCTTGCCAAAATA
GAAGAAGGATCAAATCAAGTAATTGGCAATAATGATTCTGTTCAGGATGA
GTCTAATGCTAATGACAGCAATAATTCAGACGAAAACTCAGCTCTCAACC
AAAACATTTACACACCGAACACTTAATCACACACAATCACTCTACTCAAA
TACACTGTCACTTCAGCAGCAGGAGGTTTCACCAAGCACATTGACAGGCA
TATTGCAAGATGACTCGAACAACTGTCAAGGCAGCATGATTATGAATAAC
AATATAGATACTAGTATCGATGTTTCAATGTACCGTCACAATAACCATGT
AGCAGCAGCAGGACCTTCTCATGATGATGGAGATGATGGTGACTTCTCTG
TTCCTCTAAATGAATTGGATCAATCTAATAATGACAGggAAAACCTTATA
CTCTCAAATCTCATGCGAAGCCTTGTCATTGCATCTGGTATGAATGCCTC
AATAAAAATGACAGAAGAGCTGTTGGCTTATGTTGGGGAACTTTTGAGTC
ATGCTCACAATATGGAAAATTGGCCACCATCTTATGTCACTGCTACTTCT
CTTCTTAAAAGTAGGGGCGTTTACATTGATCCTGTTCACCATAAAGTCTG
CTTTAGCGTCGATCACCCCCTTCACCACTATGTTGTTGGTATTGATGAGC
AATGCCCACATTGTGATGTGACACCCTCAGTTGATAGATATTATCTTCCT
ATTAAGGATAAAATAAATCGTTGGTTTCTATCGGATGACATGGCAGAAAA
AATGTTAGCTCATTGGAGAGATAGAGATGTGTGGTTAGGAAAATCAGGAG
TTAGCTATCCAGTAAATGAGATTTGGCACGGTTCCAGATTCAAAGAATTG
CAGTGGTTCTGGGACACTGATTGTAGATGGCCACTTCCACACATTTGTAC
CAATTGCCACAGTTATATCAATCTTAATGGAAATCAAAGTGAAACAATTG
ATGTAACTTGTTATCATTGTTACAAAGAAGAGACAATACAACCAAAGTTT
GTACATGGAGATCCTCGAAACATTGCTTTGATTGGCCATTGGGATGGGTG
GAGTCCAAAATCTGGAAGAGGCTCTGGTTCCATTGAGATATCAATTGCCA
CAATGGAGAAGCTTCATCGTTCAAAGAATGACCACATTTACACCACAACC
TTTGTGCCAGAGCATGCTTTGCCCAATAAAGAACCAAATGCTTTAGATCC
ATTTTTGGAACCACTCATTACAGAGTTGGAAGAACTTTTTATTGATGGAC
TGGAAGTTAAATATCCAATAGATGTTGGTAACCTGAAGGCTGGAAATTGC
ACAATCAGATGTTTGTTAATTTGTTGGACAGGTGACTATCCAGCGCAGTG
TCAAATTGGCAAGTTTTCTTGCAGGGGGACATATGGTTGCCGTGTAGATA
AGTGTAAAGGTGAATCTGTCAATGGTAGTTGTTAGCTTCTCTATATGTTG
TTCACGATTTACCGATGGGGTaattattttccaaaacttgctgacgtcat
cataaaatgACCCAATTTTCAAAGATATATTTTTAAGTCCTCACTGGTGG
TACAATTACTTGCTTTATTTAGCAGATTCAACCACTGAAGtacaagcccg
aagggctagaatcgaatctctatGGTGGGATTTGAAGCCTTCCCATCcca
ccaaagttgcgcggccttgagcgacccacCT
Run BLAST on NCBI

protein sequence of TCONS_00035538-protein

>TCONS_00035538-protein ID=TCONS_00035538-protein|Name=TCONS_00035538-protein|organism=Clytia hemisphaerica|type=polypeptide|length=467bp
MILFRMSLMLMTAIIQTKTQLSTKTFTHRTLNHTQSLYSNTLSLQQQEVS
PSTLTGILQDDSNNCQGSMIMNNNIDTSIDVSMYRHNNHVAAAGPSHDDG
DDGDFSVPLNELDQSNNDRENLILSNLMRSLVIASGMNASIKMTEELLAY
VGELLSHAHNMENWPPSYVTATSLLKSRGVYIDPVHHKVCFSVDHPLHHY
VVGIDEQCPHCDVTPSVDRYYLPIKDKINRWFLSDDMAEKMLAHWRDRDV
WLGKSGVSYPVNEIWHGSRFKELQWFWDTDCRWPLPHICTNCHSYINLNG
NQSETIDVTCYHCYKEETIQPKFVHGDPRNIALIGHWDGWSPKSGRGSGS
IEISIATMEKLHRSKNDHIYTTTFVPEHALPNKEPNALDPFLEPLITELE
ELFIDGLEVKYPIDVGNLKAGNCTIRCLLICWTGDYPAQCQIGKFSCRGT
YGCRVDKCKGESVNGSC
Run BLAST on NCBI

transcript from alignment at sc0001328:4721..9027+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035538 ID=TCONS_00035538|Name=TCONS_00035538|organism=Clytia hemisphaerica|type=transcript|length=4307bp|location=Sequence derived from alignment at sc0001328:4721..9027+ (Clytia hemisphaerica)
AAAAGAACCAAGCAAAGACAAAGAAGAACAGATAGAAATGGCTGAATGGT
GCTGAATTAAAGATTACAAGATGGAAGGTGAGCAAGAACCACAACCAAAA
TGGGCTAGACTGTCAGTTGCAAACTGTCGGTGTGAGAAATCAACTATTCA
ACCACACACACACTGTCCTTGTCCGTCTTGCAAAGGAAAAGCTGTTCATC
GAAACACAGAAATTGCACATTGCAAACAATATTTAATGCTTGCCAAAATA
GAAGAAGGATCAAATCAAGTAATTGGCAATAATGATTCTGTTCAGGATGA
GTCTAATGCTAATGACAGCAATAATTCAGACGAAAACTCAGCTCTCAACC
AAAACATTTACACACCGAACACTTAATCACACACAATCACTCTACTCAAA
TACACTGTCACTTCAGCAGCAGGAGGTTTCACCAAGCACATTGACAGGCA
TATTGCAAGATGACTCGAACAACTGTCAAGGCAGCATGATTATGAATAAC
AATATAGATACTAGTATCGATGTTTCAATGTACCGTCACAATAACCATGT
AGCAGCAGCAGGACCTTCTCATGATGATGGAGATGATGGTGACTTCTCTG
TTCCTCTAAATGAATTGGATCAATCTAATAATGACAGGTAATTTAAATTT
CACACCCACATTTTGCATAAAGCTCTTCCAGTTAAGAGTGTTTAAGAGTC
CGGATATACCACAGGAAtatcagtctgggaaatcctctcaattgcatgct
tatgttccgagggcgtaagcccgtaattgcatggttataatttacgcccg
aTCCCGCCctggttgaaattgcttagggatttcaaggggttcagaattct
ctaattcaggcgaaggcatggtttaacgggcaatccatttttacgaatct
tcttctacgataaattttgagtaaaactgccctaggcttttgaaattcaa
cagagctttcggaaggaattacatgtgaaaaatataggaaattttaaagc
gtgcaattacacgcttaccgcaaaagccgtcacccgtcaatcttgcttaa
cgcttaccgcccgtttcagaacaatttcgataagcgtgtaattacacgct
taaaaattctgccattttgataaccgtgcgattgcgcgcttacggcctcg
gaacataagcgtgcaattgagaggatttcccagactgctTGCCGATTTTG
GTACCGTATGTCGTCAGTATAGGTTTTAAATTTAATCCTTCATGTCTTTG
TCATTTATTGAGCAGTAAAAAAATCAACTAACCTTCCATCATACAATCTA
GCCTTTTCTCAAACTGTTTTCATGTTGttcgtaaaaaaaaaacacgcatg
attgaattcatttggattTTTATGACTTTGGAGCGTGCATATAATTAAAT
TGTTATCGAGATCTTTTTGCTTGTAACTACCgcaacttggtctaatgttg
acacccctcctcttatttcgacaccctttttatcagctgaaattgataga
aaggttgaaactgtttttctttgcttagatGTCAGAGAGGAAtgatcctt
tttcaatcagtgattcaagctttcctattattcctatctctaaagcaGAG
TgtttagaccaacttacggtacaaaTATCACAAGATTTCAAATCGGTCTC
TCTGAAAACAGGGCAATGGGCACTTAGGATAACCAAAGGGTGATAGGTTA
TAGTTATGGTTAAGATATGTATATTGAAAAGTCAAAACTGAGAATTAAAT
TCATCAAACACTTtgtgtgaaaatttttcttctttattttcagggAAAAC
CTTATACTCTCAAATCTCATGCGAAGCCTTGTCATTGCATCTGGTATGAA
TGCCTCAATAAAAATGACAGAAGAGCTGTTGGCTTATGTTGGGGAACTTT
TGAGTCATGCTCACAATATGGAAAATTGGCCACCATCTTATGTCACTGCT
ACTTCTCTTCTTAAAAGTAGGGGCGTTTACATTGATCCTGTTCACCATAA
AGTCTGCTTTAGCGTCGATCACCCCCTTCACCACTATGTTGTTGGTATTG
ATGAGCAATGCCCACATTGTGATGTGACACCCTCAGTTGATAGATATTAT
CTTCCTATTAAGGATAAAATAAATCGTTGGTTTCTATCGGATGACATGGC
AGAAAAAATGTTAGCTCATTGGAGAGATAGAGATGTGTGGTTAGGAAAAT
CAGGAGTTAGCTATCCAGTAAATGAGATTTGGCACGGTTCCAGATTCAAA
GAATTGCAGTGGTTCTGGGACACTGATTGTAGATGGCCACTTCCACACAT
TTGTACCAATTGCCACAGTTATATCAATCTTAATGGAAATCAAAGTGAAA
CAATTGATGTAACTTGTTATCATTGTTACAAAGAAGAGACAATACAACCA
AAGTTTGTACATGGAGATCCTCGAAACATTGCTTTGATTGGCCATTGGGA
TGGGTGGAGTCCAAAATCTGGAAGAGGCTCTGGTAggttttagttatttt
tttgtccatttacTTTAGGTGCCTAATAAGCATAGGGGTTCAAATAAACA
GTCGGATAATGATTGTGGGGACACATGCATTGGGCACCTGAGACTACTAG
ACAAGTCAAGTTTCATGTTCTACAGATAGTTAATCTAGTTTGAGCCAATA
AAAACTATCCATGGAGAGGAATTCATGAGTAAACCCTTTTTGTGTGTAAT
GTAATATAATTTTATACTAAAAGATACTCATTTGTTATTGTGTGTATTAT
TGTAATATTAATCACATGATGCTAAAATTCTGTATCATCATATAATGTAA
CATTGGGAataattttctgtaattttccCATAAAACTCTTGTTGATGTTT
TTATACACGGGAATTTTATTGTAATAGGACACCAAAGATTTAAAATAAGT
CTTGGAAGATTTGTCACAAAATTTGTGACATCGATTTTCTCTAAGCTTGG
TAAATGGCACGGCACATACAAAGGATTTTATTCAAAAGATCTAATAATTG
CTCAAACCTCAAGAGTTATGTGTGTACAGGGCAATTTCAGGATCTCAATT
TCAGGTAATAATTCCCAGTAAAACCATCAATCAACAAGAGCGCCATGGCT
TGGCTATTAGCTAGTCTTAAAATTATAACTCCCAATTTCTTTACTATTAA
GGTTCCATTGAGATATCAATTGCCACAATGGAGAAGCTTCATCGTTCAAA
GAATGACCACATTTACACCACAACCTTTGTGCCAGAGCATGCTTTGCCCA
ATAAAGAACCAAATGCTTTAGATCCATTTTTGGAACCACTCATTACAGAG
TTGGAAGAACTTTTTATTGATGGTAAGTCTACTTTTGAGGCATATTATAA
ATTATACTATACTACCTTTTGCTGTTTTGTTATTGAGATACAGTTCAACT
GTAAAATCATTATGAAAATAACCAGTACCAACATTACTCATTTAGCAGTT
TATTATACCTTACCACCCAGCTCAGGAGAAAATATTATCTTACCCAAAGT
ATAATTGGACactaaagatatttaaaaacttTCGTTCTCACATGTCACCA
ACTGATTATACTCACCTACTTCACTCACCTACTTCACTCAcctaaatttt
cttataaatctCACATTTAGGACTGGAAGTTAAATATCCAATAGATGTTG
GTAACCTGAAGGCTGGAAATTGCACAATCAGATGTTTGTTAATTTGTTGG
ACAGGTGACTATCCAGCGCAGTGTCAAATTGGCAAGTTTTCTTGCAGGGG
GACATATGGTTGCCGTGTAGATAAGTGTAAAGGTTTGAAAGCTTTCAGCT
CATTTTATTTTGTGAATATCTCAGTTTGTTCATTCAAGTGCCAGAAATTG
CCATGAATTTGAAAGTATAACCAgcatcaaaatcatcattttagaCAATT
TAAATTTGACTATTATAACAGGGATataatgtatttttaatttaGAACTT
TGCACTTTGAATCTAGGATACTTGAATCTCCTTAAACCTTTTTTACAATT
CATGTTTAATCAACCTATGAAATTCTTTATTTCAGGTGAATCTGTCAATG
GTAGTTGTTAGCTTCTCTATATGTTGTTCACGATTTACCGATGGGGTaat
tattttccaaaacttgctgacgtcatcataaaatgACCCAATTTTCAAAG
ATATATTTTTAAGTCCTCACTGGTGGTACAATTACTTGCTTTATTTAGCA
GATTCAACCACTGAAGtacaagcccgaagggctagaatcgaatctctatG
GTGGGATTTGAAGCCTTCCCATCccaccaaagttgcgcggccttgagcga
cccacCT

Coding sequence (CDS) from alignment at sc0001328:4721..9027+

>TCONS_00035538 ID=TCONS_00035538|Name=TCONS_00035538|organism=Clytia hemisphaerica|type=CDS|length=7020bp|location=Sequence derived from alignment at sc0001328:4721..9027+ (Clytia hemisphaerica)
ATGATTCTGTTCAGGATGAGTCTAATGCTAATGACAGCAATAATTCAGAC
GAAAACTCAGCTCTCAACCAAAACATTTACACACCGAACACTTAATCACA
CACAATCACTCTACTCAAATACACTGTCACTTCAGCAGCAGGAGGTTTCA
CCAAGCACATTGACAGGCATATTGCAAGATGACTCGAACAACTGTCAAGG
CAGCATGATTATGAATAACAATATAGATACTAGTATCGATGTTTCAATGT
ACCGTCACAATAACCATGTAGCAGCAGCAGGACCTTCTCATGATGATGGA
GATGATGGTGACTTCTCTGTTCCTCTAAATGAATTGGATCAATCTAATAA
TGACAGggAAAACCTTATACTCTCAAATCTCATGCGAAGCCTTGTCATTG
CATCTGGTATGAATGCCTCAATAAAAATGACAGAAGAGCTGTTGGCTTAT
GTTGGGGAACTTTTGAGTCATGCTCACAATATGGAAAATTGGCCACCATC
TTATGTCACTGCTACTTCTCTTCTTAAAAGTAGGGGCGTTTACATTGATC
CTGTTCACCATAAAGTCTGCTTTAGCGTCGATCACCCCCTTCACCACTAT
GTTGTTGGTATTGATGAGCAATGCCCACATTGTGATGTGACACCCTCAGT
TGATAGATATTATCTTCCTATTAAGGATAAAATAAATCGTTGGTTTCTAT
CGGATGACATGGCAGAAAAAATGTTAGCTCATTGGAGAGATAGAGATGTG
TGGTTAGGAAAATCAGGAGTTAGCTATCCAGTAAATGAGATTTGGCACGG
TTCCAGATTCAAAGAATTGCAGTGGTTCTGGGACACTGATTGTAGATGGC
CACTTCCACACATTTGTACCAATTGCCACAGTTATATCAATCTTAATGGA
AATCAAAGTGAAACAATTGATGTAACTTGTTATCATTGTTACAAAGAAGA
GACAATACAACCAAAGTTTGTACATGGAGATCCTCGAAACATTGCTTTGA
TTGGCCATTGGGATGGGTGGAGTCCAAAATCTGGAAGAGGCTCTGGTTCC
ATTGAGATATCAATTGCCACAATGGAGAAGCTTCATCGTTCAAAGAATGA
CCACATTTACACCACAACCTTTGTGCCAGAGCATGCTTTGCCCAATAAAG
AACCAAATGCTTTAGATCCATTTTTGGAACCACTCATTACAGAGTTGGAA
GAACTTTTTATTGATGGACTGGAAGTTAAATATCCAATAGATGTTGGTAA
CCTGAAGGCTGGAAATTGCACAATCAGATGTTTGTTAATTTGTTGGACAG
GTGACTATCCAGCGCAGTGTCAAATTGGCAAGTTTTCTTGCAGGGGGACA
TATGGTTGCCGTGTAGATAAGTGTAAAGGTGAATCTGTCAATGGTAGTTG
TTAGATGATTCTGTTCAGGATGAGTCTAATGCTAATGACAGCAATAATTC
AGACGAAAACTCAGCTCTCAACCAAAACATTTACACACCGAACACTTAAT
CACACACAATCACTCTACTCAAATACACTGTCACTTCAGCAGCAGGAGGT
TTCACCAAGCACATTGACAGGCATATTGCAAGATGACTCGAACAACTGTC
AAGGCAGCATGATTATGAATAACAATATAGATACTAGTATCGATGTTTCA
ATGTACCGTCACAATAACCATGTAGCAGCAGCAGGACCTTCTCATGATGA
TGGAGATGATGGTGACTTCTCTGTTCCTCTAAATGAATTGGATCAATCTA
ATAATGACAGggAAAACCTTATACTCTCAAATCTCATGCGAAGCCTTGTC
ATTGCATCTGGTATGAATGCCTCAATAAAAATGACAGAAGAGCTGTTGGC
TTATGTTGGGGAACTTTTGAGTCATGCTCACAATATGGAAAATTGGCCAC
CATCTTATGTCACTGCTACTTCTCTTCTTAAAAGTAGGGGCGTTTACATT
GATCCTGTTCACCATAAAGTCTGCTTTAGCGTCGATCACCCCCTTCACCA
CTATGTTGTTGGTATTGATGAGCAATGCCCACATTGTGATGTGACACCCT
CAGTTGATAGATATTATCTTCCTATTAAGGATAAAATAAATCGTTGGTTT
CTATCGGATGACATGGCAGAAAAAATGTTAGCTCATTGGAGAGATAGAGA
TGTGTGGTTAGGAAAATCAGGAGTTAGCTATCCAGTAAATGAGATTTGGC
ACGGTTCCAGATTCAAAGAATTGCAGTGGTTCTGGGACACTGATTGTAGA
TGGCCACTTCCACACATTTGTACCAATTGCCACAGTTATATCAATCTTAA
TGGAAATCAAAGTGAAACAATTGATGTAACTTGTTATCATTGTTACAAAG
AAGAGACAATACAACCAAAGTTTGTACATGGAGATCCTCGAAACATTGCT
TTGATTGGCCATTGGGATGGGTGGAGTCCAAAATCTGGAAGAGGCTCTGG
TTCCATTGAGATATCAATTGCCACAATGGAGAAGCTTCATCGTTCAAAGA
ATGACCACATTTACACCACAACCTTTGTGCCAGAGCATGCTTTGCCCAAT
AAAGAACCAAATGCTTTAGATCCATTTTTGGAACCACTCATTACAGAGTT
GGAAGAACTTTTTATTGATGGACTGGAAGTTAAATATCCAATAGATGTTG
GTAACCTGAAGGCTGGAAATTGCACAATCAGATGTTTGTTAATTTGTTGG
ACAGGTGACTATCCAGCGCAGTGTCAAATTGGCAAGTTTTCTTGCAGGGG
GACATATGGTTGCCGTGTAGATAAGTGTAAAGGTGAATCTGTCAATGGTA
GTTGTTAGATGATTCTGTTCAGGATGAGTCTAATGCTAATGACAGCAATA
ATTCAGACGAAAACTCAGCTCTCAACCAAAACATTTACACACCGAACACT
TAATCACACACAATCACTCTACTCAAATACACTGTCACTTCAGCAGCAGG
AGGTTTCACCAAGCACATTGACAGGCATATTGCAAGATGACTCGAACAAC
TGTCAAGGCAGCATGATTATGAATAACAATATAGATACTAGTATCGATGT
TTCAATGTACCGTCACAATAACCATGTAGCAGCAGCAGGACCTTCTCATG
ATGATGGAGATGATGGTGACTTCTCTGTTCCTCTAAATGAATTGGATCAA
TCTAATAATGACAGggAAAACCTTATACTCTCAAATCTCATGCGAAGCCT
TGTCATTGCATCTGGTATGAATGCCTCAATAAAAATGACAGAAGAGCTGT
TGGCTTATGTTGGGGAACTTTTGAGTCATGCTCACAATATGGAAAATTGG
CCACCATCTTATGTCACTGCTACTTCTCTTCTTAAAAGTAGGGGCGTTTA
CATTGATCCTGTTCACCATAAAGTCTGCTTTAGCGTCGATCACCCCCTTC
ACCACTATGTTGTTGGTATTGATGAGCAATGCCCACATTGTGATGTGACA
CCCTCAGTTGATAGATATTATCTTCCTATTAAGGATAAAATAAATCGTTG
GTTTCTATCGGATGACATGGCAGAAAAAATGTTAGCTCATTGGAGAGATA
GAGATGTGTGGTTAGGAAAATCAGGAGTTAGCTATCCAGTAAATGAGATT
TGGCACGGTTCCAGATTCAAAGAATTGCAGTGGTTCTGGGACACTGATTG
TAGATGGCCACTTCCACACATTTGTACCAATTGCCACAGTTATATCAATC
TTAATGGAAATCAAAGTGAAACAATTGATGTAACTTGTTATCATTGTTAC
AAAGAAGAGACAATACAACCAAAGTTTGTACATGGAGATCCTCGAAACAT
TGCTTTGATTGGCCATTGGGATGGGTGGAGTCCAAAATCTGGAAGAGGCT
CTGGTTCCATTGAGATATCAATTGCCACAATGGAGAAGCTTCATCGTTCA
AAGAATGACCACATTTACACCACAACCTTTGTGCCAGAGCATGCTTTGCC
CAATAAAGAACCAAATGCTTTAGATCCATTTTTGGAACCACTCATTACAG
AGTTGGAAGAACTTTTTATTGATGGACTGGAAGTTAAATATCCAATAGAT
GTTGGTAACCTGAAGGCTGGAAATTGCACAATCAGATGTTTGTTAATTTG
TTGGACAGGTGACTATCCAGCGCAGTGTCAAATTGGCAAGTTTTCTTGCA
GGGGGACATATGGTTGCCGTGTAGATAAGTGTAAAGGTGAATCTGTCAAT
GGTAGTTGTTAGATGATTCTGTTCAGGATGAGTCTAATGCTAATGACAGC
AATAATTCAGACGAAAACTCAGCTCTCAACCAAAACATTTACACACCGAA
CACTTAATCACACACAATCACTCTACTCAAATACACTGTCACTTCAGCAG
CAGGAGGTTTCACCAAGCACATTGACAGGCATATTGCAAGATGACTCGAA
CAACTGTCAAGGCAGCATGATTATGAATAACAATATAGATACTAGTATCG
ATGTTTCAATGTACCGTCACAATAACCATGTAGCAGCAGCAGGACCTTCT
CATGATGATGGAGATGATGGTGACTTCTCTGTTCCTCTAAATGAATTGGA
TCAATCTAATAATGACAGggAAAACCTTATACTCTCAAATCTCATGCGAA
GCCTTGTCATTGCATCTGGTATGAATGCCTCAATAAAAATGACAGAAGAG
CTGTTGGCTTATGTTGGGGAACTTTTGAGTCATGCTCACAATATGGAAAA
TTGGCCACCATCTTATGTCACTGCTACTTCTCTTCTTAAAAGTAGGGGCG
TTTACATTGATCCTGTTCACCATAAAGTCTGCTTTAGCGTCGATCACCCC
CTTCACCACTATGTTGTTGGTATTGATGAGCAATGCCCACATTGTGATGT
GACACCCTCAGTTGATAGATATTATCTTCCTATTAAGGATAAAATAAATC
GTTGGTTTCTATCGGATGACATGGCAGAAAAAATGTTAGCTCATTGGAGA
GATAGAGATGTGTGGTTAGGAAAATCAGGAGTTAGCTATCCAGTAAATGA
GATTTGGCACGGTTCCAGATTCAAAGAATTGCAGTGGTTCTGGGACACTG
ATTGTAGATGGCCACTTCCACACATTTGTACCAATTGCCACAGTTATATC
AATCTTAATGGAAATCAAAGTGAAACAATTGATGTAACTTGTTATCATTG
TTACAAAGAAGAGACAATACAACCAAAGTTTGTACATGGAGATCCTCGAA
ACATTGCTTTGATTGGCCATTGGGATGGGTGGAGTCCAAAATCTGGAAGA
GGCTCTGGTTCCATTGAGATATCAATTGCCACAATGGAGAAGCTTCATCG
TTCAAAGAATGACCACATTTACACCACAACCTTTGTGCCAGAGCATGCTT
TGCCCAATAAAGAACCAAATGCTTTAGATCCATTTTTGGAACCACTCATT
ACAGAGTTGGAAGAACTTTTTATTGATGGACTGGAAGTTAAATATCCAAT
AGATGTTGGTAACCTGAAGGCTGGAAATTGCACAATCAGATGTTTGTTAA
TTTGTTGGACAGGTGACTATCCAGCGCAGTGTCAAATTGGCAAGTTTTCT
TGCAGGGGGACATATGGTTGCCGTGTAGATAAGTGTAAAGGTGAATCTGT
CAATGGTAGTTGTTAGATGATTCTGTTCAGGATGAGTCTAATGCTAATGA
CAGCAATAATTCAGACGAAAACTCAGCTCTCAACCAAAACATTTACACAC
CGAACACTTAATCACACACAATCACTCTACTCAAATACACTGTCACTTCA
GCAGCAGGAGGTTTCACCAAGCACATTGACAGGCATATTGCAAGATGACT
CGAACAACTGTCAAGGCAGCATGATTATGAATAACAATATAGATACTAGT
ATCGATGTTTCAATGTACCGTCACAATAACCATGTAGCAGCAGCAGGACC
TTCTCATGATGATGGAGATGATGGTGACTTCTCTGTTCCTCTAAATGAAT
TGGATCAATCTAATAATGACAGggAAAACCTTATACTCTCAAATCTCATG
CGAAGCCTTGTCATTGCATCTGGTATGAATGCCTCAATAAAAATGACAGA
AGAGCTGTTGGCTTATGTTGGGGAACTTTTGAGTCATGCTCACAATATGG
AAAATTGGCCACCATCTTATGTCACTGCTACTTCTCTTCTTAAAAGTAGG
GGCGTTTACATTGATCCTGTTCACCATAAAGTCTGCTTTAGCGTCGATCA
CCCCCTTCACCACTATGTTGTTGGTATTGATGAGCAATGCCCACATTGTG
ATGTGACACCCTCAGTTGATAGATATTATCTTCCTATTAAGGATAAAATA
AATCGTTGGTTTCTATCGGATGACATGGCAGAAAAAATGTTAGCTCATTG
GAGAGATAGAGATGTGTGGTTAGGAAAATCAGGAGTTAGCTATCCAGTAA
ATGAGATTTGGCACGGTTCCAGATTCAAAGAATTGCAGTGGTTCTGGGAC
ACTGATTGTAGATGGCCACTTCCACACATTTGTACCAATTGCCACAGTTA
TATCAATCTTAATGGAAATCAAAGTGAAACAATTGATGTAACTTGTTATC
ATTGTTACAAAGAAGAGACAATACAACCAAAGTTTGTACATGGAGATCCT
CGAAACATTGCTTTGATTGGCCATTGGGATGGGTGGAGTCCAAAATCTGG
AAGAGGCTCTGGTTCCATTGAGATATCAATTGCCACAATGGAGAAGCTTC
ATCGTTCAAAGAATGACCACATTTACACCACAACCTTTGTGCCAGAGCAT
GCTTTGCCCAATAAAGAACCAAATGCTTTAGATCCATTTTTGGAACCACT
CATTACAGAGTTGGAAGAACTTTTTATTGATGGACTGGAAGTTAAATATC
CAATAGATGTTGGTAACCTGAAGGCTGGAAATTGCACAATCAGATGTTTG
TTAATTTGTTGGACAGGTGACTATCCAGCGCAGTGTCAAATTGGCAAGTT
TTCTTGCAGGGGGACATATGGTTGCCGTGTAGATAAGTGTAAAGGTGAAT
CTGTCAATGGTAGTTGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020795XLOC_020795Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035538-exon-sc0001328-1491911889:4721..5357TCONS_00035538-exon-sc0001328-1491911889:4721..5357Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1510915933:4721..5357TCONS_00035538-exon-sc0001328-1510915933:4721..5357Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1575043694:4721..5357TCONS_00035538-exon-sc0001328-1575043694:4721..5357Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1491911889:6514..7202TCONS_00035538-exon-sc0001328-1491911889:6514..7202Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1510915933:6514..7202TCONS_00035538-exon-sc0001328-1510915933:6514..7202Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1575043694:6514..7202TCONS_00035538-exon-sc0001328-1575043694:6514..7202Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1491911889:7872..8042TCONS_00035538-exon-sc0001328-1491911889:7872..8042Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1510915933:7872..8042TCONS_00035538-exon-sc0001328-1510915933:7872..8042Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1575043694:7872..8042TCONS_00035538-exon-sc0001328-1575043694:7872..8042Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1491911889:8341..8502TCONS_00035538-exon-sc0001328-1491911889:8341..8502Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1510915933:8341..8502TCONS_00035538-exon-sc0001328-1510915933:8341..8502Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1575043694:8341..8502TCONS_00035538-exon-sc0001328-1575043694:8341..8502Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1491911889:8756..9027TCONS_00035538-exon-sc0001328-1491911889:8756..9027Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1510915933:8756..9027TCONS_00035538-exon-sc0001328-1510915933:8756..9027Clytia hemisphaericaexon
TCONS_00035538-exon-sc0001328-1575043694:8756..9027TCONS_00035538-exon-sc0001328-1575043694:8756..9027Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035538-proteinTCONS_00035538-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001328supercontigsc0001328:4721..9027 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.435869	0.549998	0.52759	0.65596	2.73112	1.3489	0.774882	0.242715	0.483448	1.17975	0.551891	0.39094	0.443951	0	0.424227	0.495335	0.48014	0.304548	0.280322	0.788562	0.292775	0.422519	0.180489	0.230529	0.221818	0.503815	0.635922	0.550664	0.33896	0.517624
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035538 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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