XLOC_019938 (gene) - C. hemisphaerica

Overview
NameXLOC_019938
Unique NameXLOC_019938
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001159:81635..85659+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_019938 ID=XLOC_019938|Name=XLOC_019938|organism=Clytia hemisphaerica|type=gene|length=4025bp|location=Sequence derived from alignment at sc0001159:81635..85659+ (Clytia hemisphaerica)
ctttaccgtagaaatcttgttaaattgtgaaaaaactgcgtaaacttccc
aaacgggaagttCCAACCCAATCGggttttccttattttcaactttttcc
cgcttcttcccGATCTGGAAGTCCGTTTTTAAACTCTTGCCCATTCTTCC
TGAACGGGAAGCCTTGAAGCCTCGCATGTTTTTAATTCCACCACGCTGCC
TGCTGCTCAACCAccagattttgaattttgattgaaacTAAGCAATGGAT
TGCAACAACTTTGAAGAAGAAGAACCAAACATGGAAGAAACACAAAATCA
AAGTATGTATCTTCTATCGAGTCTGTTATTTTTGTCTACTCCACTGCTGT
TTTGGAGGCAATGCTTTACATTTTCCCTCCCTTCATGCAAGCTTatctat
gtttttattttatcaagtCCAAGTGGGACTAGTCTAAAATTCTACTATAT
GTATCTAGTCGAAAAATTTGAAGCTAATCAAAACAATCAGTTTTTTGATT
TACTCAAATTCATCGAAGTACGAAGTCTAATCAGTTTGAGATCTGAAAAA
GATTGGAAAATTTTATTAGTAATTCGATTAATTAGATTGAGCtttgattg
cttcgattactGTTTGATTACAGTTTAATGACTACTCTTTGCATATGCTT
TCCAAGCTTAAAgttatcgaactaatcgaacaatGAAGAAAAGAGAGGCT
GCAAactgttttttaattttattttcaaaattttgtaagCAACACATGCA
TACTTTTTGAACACAATGGTTGTGAGCAGCTAGCAAGTTTAATCGATAGC
TAAAATTAATATTAACCGTTTGATTAGACATCGATTGGAATCAATAATCA
ATACCGtgataccgtgaagtcgggtaacttgcatcagtggaggtaactcc
agttgagatacaaatatatcatttccctcttgccagtaagagggtttttg
gttcaaatgacCATCTAATCCTAAGGTTTCCGTCCATATTGACATAACCT
AGTTGCAACACTGAATAATTGAGCTATCAATTAAAATAGTTGATACAATC
AATACCAATAGGTAATCAATACTTTaatcaatattcaaaattttttttac
cttgattagctatcgattattGACTCTAATCGATATCTAATTGATTGATT
AATATTGATTAGCTCTCTAATAAAACTGATGATTGATTTTATCGATTCTA
AAGGTACATAAGCCTGGGTTTACAAACTTGAAATTAAGATCAGACTGTAA
ACAcagatttttatcaaaatcaatgATATATTACAGCCTGGCAGTCTCAT
AATCTTGCTCTTTCCACAATTTCATTTGATATCCTTGCTTGATGGAGGAG
AACCTACAACAGATTCAAGCTGAGCTCTATTTATATTGACCCTCATCACC
CATAGACTAAAAGTAGTTTAAAGTCATAAAAGTTAATTACTCCTCTGTGT
ACTCCCAAGTTGGGGAATTTCAAATCATTCTTGATCAATTACATTTATGA
TAATCTAAGCAGAAACAAGTTAGGTAAGGAAGCTTGAATCTTGAACGAGC
AAGATAAAGAGACTgcctggatacccaggctaactggaaatttaaattta
ttgcTGTTTTATTTTAAGCTCAACAAGTTATGGAAATCACACCAGAACAA
ATGGGTCTCTTATACCAATTGGTGCAACAAGACCCTCGGTTTCAATCACA
TGAAAACGTTACCCTTTTGCAACCTCTCATCCCTCAGCAGCAACCTAACA
AAAATTCCAGTAATATGTCTTATGGAGAAACATCAGAAGATTATTCAGCT
AATACTAGTAGTAACCTATCAGTCTTGGCAGATGCCTCACGCTTATTCCA
AGAACCTCTTGCAAGTCAGCCATCAACAGATACTATAAAGGTGAGCTCTT
AAGTGTATCAGGTCAACAGCTTCGTCTCATTTTACTTGATGTTGATGCTT
TTTTAATTTAAACAGTAAGcagcatttcaacttttctgtCAGTTGACAGA
AATTTGTTTACTTGAATTTCTAACAAGGGTTTCTCTTATTTTAGCAATTT
TGAGTAGTGGAATTTGTTATATAATTCTTTTATTAACCAGGTTAGACCAT
GTTGTACtgggtaaatgttttttctagaTTGCTCAAAGGAAGCAACTGCA
AGGGAGCACTGCATAATGATATATTAAACTATTGCATTTCTCAGTATTTT
AAAAACTGACTTTAAATCCTCATTGTTTATTGTAAAAAACTCAAATATGT
TCTTGTATAATTCAAAGATAAATTTGCATACATTACTATGTACCACTTAT
TTTTCAGATTATTACTGTTAAACAATTAGGAAATGGAACCTGAATGAACC
CAATACCCTGTATATTCATTATCCCAATATCCCAACCCGAAGACCCAAAC
ACCCGAAGACATGGTACTGTAACCCTGATTTCCTGTTGTATGTATTTTAT
GTCCAAATCCTGGTTATCATatatttctgaaaagaaaaatgtaGTTTTAG
GGGAAATCAAAGgagaaaataatataatttagGGTCATCTTATCTTCTTa
cattctttttgaaaacaggtcaaataaattttaagcaaataaatGGGTAA
TTCAAACTACATTTTGGGAAATTTGTATTATGTATTTATAGCAATTGCCT
CATCTTTGCTGTAATTCAAAGagctttttttgagaaatcatGAATAGAGC
TAATGCATGCAATGTTTAGCTGACCATGTGCTCTTACtggtcatattttt
ttattgattcaTTGCATTGTCTTTATTCTAGACCCCTCCGAATCATCACA
AGGGACCCATCAGGATTCAATACGAAGCTGAACCTAAAAGGCGTGGCACT
GCATACGCGAAGCGGTCAGCAACCTTGAAGCAAAAAGTAAGAGGTCCACT
CGTTTTAGTTTGGAGATTGTTGTTTCAAAGCAGATATCCCTAAAGGGACT
CGCATTTGAATTTTTGGCACTTGATAACTCGGTGATATATTActcagttt
ttgttttttatttcacatACTCGCTAATTGTACTTCTAGAAACCCCAGAT
AATGGCAAATAAAGGCTAAATCAGGATATTTAGCGTAAAATAAGGGACAT
AGTTTGCAAAAATAGGAAGAAGTAAGATTTATTGGAACCAAAACTTTTCG
GTCATGTTGACATTCATTACCANCAGATTATGGCAAATAAAGGCTAAATC
AGGATATTTAGTGTAAAATAAGGGACATAGTTTGCAAAAATAGGAAGAAG
TAAGATTTATTGGAACCAAAACTTTTTGGTCATGTTGACATTCATTACCA
CCCCCCCCcagttttttttggcaaatcttAGTTACAAGATACAACCTTCC
ACTTTtcattctttctgatttttgttcTAGGCGCATGAGCTCAATGTGAT
TACTGGCGCAAAAGTGAGATTATTGATCAATAGTAATGATTCCAATGATG
AGAAGAGTTACGGGATGCCCGTAACTGCTGTCATGGGGACTCAAACagaa
ttttcttcttcaattgcTTCAGTTCCACAAAGTATTTTTGGGACACCATC
AGCCCACCCCTTATTGACAAGGAAGGATAAGGAGACAACCCCAACTGCTA
CCGTCGTAGAAGAAAAATGTTGGTTTTCccagaaagttaaaaatttacCT
GGAATAAAACGTAAACGTTTAGATTTGGAGAAAGAAGGACAACCTGAGTC
AAAAAGGAACACGTTGAAATGTTTGATATGCAACGCTCTTCCAAAATCGG
AAAAAGACAAGCAACTTAGGAAAGACCATGGTGTGAAAGCTCGAGTTCTT
ACTTGTGGTTTTAAGGATTGTGGTAAAAGGGTGCATGGTGTTTGTGCTGG
AATTGAGGTCAAGGCCAAAGTGAAATTGCCCTATTACTTGTGCCCAGAAC
ACAAGTCTTCAAGTAATGAATTGACACTGATATTTAAAGAGAAGGTTTCT
TTATATACAAGACTTTTTTATATACTAGACTTTTTTATATACAAGActac
aaagtttttcaaattttgatttatg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00034394TCONS_00034394Clytia hemisphaericatranscript
TCONS_00034395TCONS_00034395Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00034395-proteinTCONS_00034395-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001159supercontigsc0001159:81635..85659 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.66	1.35	1.19	0.92	6.16	4.65	2.7	3.9	4.5	5.44	4.61	3.44	3.19	3.5	4.32	7.25	6.01	5.46	2.42	1.9	6.94	6.46	3.05	3.2	0.9	0.95	7.58	4.58	4.61	3.43