XLOC_015380 (gene) - C. hemisphaerica

Overview
NameXLOC_015380
Unique NameXLOC_015380
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000616:31512..38278-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015380 ID=XLOC_015380|Name=XLOC_015380|organism=Clytia hemisphaerica|type=gene|length=6767bp|location=Sequence derived from alignment at sc0000616:31512..38278- (Clytia hemisphaerica)
TATATTGTTCTTCAAGGTAGTTCCAGCAATTGTCAATGGGTCGTTAGGTT TTCCGTTATATGTCATCAATTATACTTTCAATGTACAAAAATATGTTCAT AAATACGACATTACAAGTTCCTGTACAACATCTCCAACCGTTAATCTGCT CATTGCACATATAGGCCCCCTATATCATAATCATAACTAATTCACATCAC AATGATAGGTTATGAAGATTTTATTTAAAACTTTTTATGTGGGTCATATA CTGTATCACTGCCTCAACGGTTGGAACCGAAAATGAGGGTCCCCAGACCT CTTACTGTAAAATTTGTGGTGCACTCAGACTAAATTCCATTGTACTGGAA CTTTACACTTTGCACTGCCTTTTACACGCCTGAAATTTTTTTTTACATCA GTCAGAAATGGCCAGTTGACACAGGACATTCATGTAATGTTATATGGGAA CATTGAAACAACGTTGAACAACCTGACGGGTAGAGTTTAAAGAATGTGGA AAAAAGTAATCTTTTTTTTCTTCATTTTTTGGTGTTTCCTGTATTATAAA ATGCCGATATTTAATTCTTACAAGATTCCCGTCTTTCCAAATAAAAGATC AGAAAGTGGAAAATTGTAATTAGGATTATCTCTTTGATATTTCCTGGATT GTTAGAATGAAAAAGGTGTTTACCTTCCTGGCTTTAAGTACATTGTTCCA CTTTCTCATCTTTGATTCTAGCCGTCACTTTCCATCAGAAAGACCCTTTG AAAAAGTTGNATTACATTGTTCCACTTTCTCATCTTTGATTCCAGCCGTT ATTTTCCATCAGAAAGACCCTTTGAAAGAGTTAGACTTTATATACAACTG CTAGCTATTAGACGAAATAAGTTCAAGTGTTTTTCCAAAAAAACATACGT GTCTGTGAGGCTATGAGGAGTCCCTTAATGCCAATCGTTACTTTCAGTAT CTAGACAAATGAAAAAATAACCTCCCCGTCACAGGAAAAATGCAATGCAA AAATTCGTTGAAAAACACGGCTAAATTTCGAGCGTCTTTAAACATGATTG AACACAATCGAAAGAGATCAAATTTCAGTCGAACATAATCGAATCTCAGT CAAATCTCAAAATTGCAGTCAGTAGAGTCTCCATAAGGGGACATTCGAGT AGCAGATGAGTTTTTCAAAATTTCTCCCTTATTCAATGAACAAAGTTTAC CAGATGAATAAAGCTGAGACACCATAAAGACCTTTATAAAGATACCTCTG CCTATTTTTCATGAANTAAAGCTGAGACACCATAAAGACCTTTATAAAGA TACCTCTGCCTATTTTTGTATTACAACTACTGTATATTCATTGAAAGTGA TACTTGTACTTTCTTTATCGTCATTAACTTTTAAAATTTACAAACAAATT TTGATAACTATATTCTTTTGGATTTTATAAAACGATTAAATTATTAAAAT TTAGAAATGAAAATTCTTTAACTCAATTCATTAGCATGACGTACCTTAAG GGAACTATTTTATTTTCGAGAAAATTAGTTCCCTTAAGGTGGAGGGATAC TTTTGTCTTCGGTATTGAAAAGTTAAGTGATGGTAAATATTTCAAGGTAC CTACGGAATATTTCCCGGAAAAAAGTCAAAAAATATCACATCCATCCGAA AGCTTTCTCCTTTGATTTATTCCGGAAAAAAAGAAATTTCAATTCTGCGT GGAAAGGAATTAGAAACTATAGCCAAATGATAATTGAATTTTGATTTGTG GTGTCTTGTGTTAAAAAATGTCCCGCATTATTCCCGACCGCACAAAGACG TAGATAAATCATTGAAGCCATTACAAATGTATTAGAGTCAGTCTTATTTT TGCGTATACGTGTATAAGAATGTATAACTCCAGACTAAAAACTAGTTGAC CTTTAATTTCGCATGGTCTAGAGCAAAGAAATTCAAAGAGCTTCTCTCTT TTGATTGTAAAGAGAAACTACTTCTTGAAATATTTTTGCAACAGTCAATT AAGGTTATGTGCAATCCCGGGGGGGGNTAAATAAGGAGACTGGAATCTAG TTTTGAGATCCAACATTTGAATTGAAGACATACCTAGACCCATTTTAACG GGGTTAAGGGGCAACCCGGGGGGGGGGGGTACTTAGGCAAAATGGGTGCC GGGTATGTGTGAGCCATAAGGGTACCTTTTCTCATTCCTCAAAAGTCTCT CAAAAGGGGTACAAATTCAAAAGTTAGTCTCAAAATCACGAAAATCAAAA ATTTCTCTCTAAAAGGGTCACGATTTCGCGATGAAAATCAAACCAAAATT TGGAAAAAATGGATCAAAATTTAGGAAAAAGTCTTTCAAAGGGTCGATTT TCGATTTTCGGCTCGGACATACCCGTCACCTCGCAAACCTAGTACCCCCT GGGTGTGCAATACAACACGTTCGCAGCACAAACAATACTCTAAGGTCCTT CTTTAAAGAAAATCCGAAAATCAGAATTCAGATACATACGTTGTTTGAAA CAAATGATTTCCTATAATGGGAAACCCTTTGATCCGGTTGTTTTTGACTT GTAACGTAATATTGTCCTTCAAGGTAGTTCCAGCAATTGTCAATGGGTCG TTAGGTTTTCCATTATATGTTATCAATATCATACTTCTAATGTACAAAAA TATGTTCATAAATACGACATTGCAAGTTCCTGTACAACATATCCACCAAA CATTTTTTGTTTTCTTCAAAACTTTGAAAAAAAAAATTCTCCGACTTTGG GATGAAGACATGGTTGAAAATCCCATGCACATTGTCTCAAAATTTTAGTT TAGTTAGTTTTGAAAGCGACAGTGGAAGGGGTACGATCCATATAGGACGC AGCCACACTGCAGAAAACCGTTAATCTGATCATTGCACGCATATAGGTCC CCGTATAGATTTGACTAGAATCTCCATCGATCTATTATTCCTATATGAAC CACGGATTTTCACCACCATTTATGTCTTTAAACCATAATACTTTCATCCC TCAATCGTCAAAAGGTTGATAAATTCAGATCCAAAAGAAACTCCAAAAGC GTCTTCAAAATCTAATAACGACGCCATTTACGTTTTCGCTTCATAGTTGG CAGTGATTTTCCCACAATATCATAATCATCAGCCCTACAAGCCGTACATT TACACGTGGTCGGCACGTGAATAGGGACCAGATTTTTTTGGTTGAACAGA CAAGAAAATTCAACATTGAAAATTTTGTGAGCAATTGGTTCACAGCATTC ACAAGTGTCTTTCTTTCTTGAAGCCATGTAGTTATCATCAAGCACAAGCA CTCCTTCCAAGCCTTCACTACTGAAACAAGATCCTTTGCATACGGGGAAT CTCGGGAAATGACGATCTCGGCAGCCGTTGATATGGATAGTTTTTGGAAC GAACTCTTGACGACAATTGTCGTCTATGCTAACGATGCTGGTAGTCGGTA AACAAAATGTTGCGGTCACCGACATTGAGAGGATTAGAAGCAGATTATGA GTATTCATGTTTGTTGACGAGTTTATTTAGTTTTTTTGACTCCATGACTC AGAAGATGAAAGATAGTTGTCAGCCACTTATCCTTCAAAATCTGAAGCAG AGTATTGCATCACTTCCAGGCACGTGGAAAAATCCCTAAAATTATACCAT GAATTTAGACCTCTTGAGGCTCGACTAAGCTTTTTTGTTTTTTTTCAAAA ACGTAGTGTTCCAGGTCTCAATTAAATTGACATCAATCAAAAAACACTTT ATAGCACCGATTAATAGTTTCTAATGGTAGATCTGACTGAAATTTACAAT TACCTAAATCGATAGTTTATCACAGTTGCGGTTTAAGAATGTACTATAGG AGCTTTGATTCTGGTTAGCAAGTATTCAAACCGTTATCTATCCTATTTTT AAACAATGATGTGTATGCGTATAATAATCAAAATTATGTCGCTTAAATCT AACTGGTTAAGATAATGCCCATTAAATATCAATTAAACTAATCCTGTTCT AACTGTCAAGATAATGTAACAGTTGTAAGATTTATGGGCCATCAGTCATT CGGCTAAAATTTTAGCCTATGATACATAAATCTATTAATGCTATACCGAC CATCAATCTCTCAGGGCACTTTACATTGGGTCATTAACTACTAGTCAAAA TTCGAAGACAATTCAAAATTAACCAGTACAAATTTAACTGATAAAACCCC TATAACAAACCCGAGTGAGACCCTTTTTCACTGGAAACCCTGGAATCTAA AAATTCAAAAGCTCAAGTGACTTCCCCCGCCGTTGAATTTCAACACCATT TTATTCCCAATAACTAGAAGAATCTCACCAGGTCAATGAGACAGGGATGT TACTTAAAGATTATTCAGTTTTTTTGGGTCATCCCTTTCCCTAATTTAAA TCCTTGGTGACACTGATGAGTGACAAGGTTGGTGGTAATTTTTTTTTGCG AGTAGAACCTTGTGATTAGACAGAATTAAGTTCCATTTAGGGATTTCAAT AATTCACATCGCAGTGATAGATTATGAAGATTTTATTTAAAACTTTCTTG TCTGGGTCATATACTGTATCACTGCCTCAACGGTTGGAACCGAAAATGAG GATGTCCCCAGACCACTTACTGTAAAATTTGTGGCGCACTCAGACTAAAT TCCATTGTACTGTAAACACACTTATGATGTTAAACATTTTTCAGATCGTC AAAACCTTTTACATGCCTGAAGAAAATTTTTACATCGGCCAGAAATGGTC AGTTGACACAGAACATTCATAAAATGTTATATGGGAACATTGAAACAACG TTGAACGGCCTGACGGGTAGAGTATAAAGAATGTGGAAAAAAGCAATCTT TTTTTTTTTTCATTTTTTGGTGTTTCCTGTATTATAAAATGCCAATATTT AATTCTTACAAGTTTCCCGTCTTTCCAAATAAAAGATCAGAAAGTGGAAA ATTGTAATTTGGATTATCTCTTTGATATTTCCTGGATTGTTAGAATGAAT AAGGTGTTTACCTTCCTGGCTTTAAGTACATTGTTCCACTTTCTCATCTT TGATTCTAGCCGTCATTTTCCATCAGAAAGACCCTTTGAAAAAGTTGGAC TTTATAAATAAGTTCAAGTGTTTTTCCAAAAAAACATACGTGTCTGTGAG GGTATAAGGAGTCCCTTAATGCCAATTGTTACTTTCAGTATCTAGACAAA TGAAAAACTAACCTCCCCCGTCACAGGAAAAATGCAATGCAAAAATTCGT TGAAAAAACACGGGTATATTTCGACCGTCTTTAAACACGATTGAACACAA TCGACAGAGATCAAATTTCAGTCGAATATAATCGAATCTCAGTCAAATCT CAAAATTGCAGTCAGTAGAGGGGGGACATAAGAGAGAGACATTATTAGAG ATAAGGGGACATTCGCGTAGCAGATGAGTTTTTCAAAATGTCTCCCTAAT TCGATGAATAAAGTTTACCAGATGAATAAAGCTGAGACACCATAAAGACC TTTATAAAGATACCTCTGCCTATTTTTGTATTACAACTACTGTATATTCA TTGAAAGTGATACTTGTACTTTCTTTATCGTCATTAACTTTTAAAATTTA CAAACAAATTTTGATAACTATATTCTTTTGGATTTCATAAAACGATTAAA TTATTAAAATTTAGAAATGAAAATTCTTTAACTCAATTCATTAGCATGAC GTACCTTAAGGGAAATAATCCAAAGTCCTTCTTCAACGAAAATCAGAATT CAGATACATGCGTTGTTTGAAACAAATGATTGTCTATAACGGGCAACTCT TTGATCCGGTTGTTTTTTACTTTCAGCGTTATATTGTCCTTCAAGGTAGT TCCACCAACTGTCGATGGGCCGTTAGGTTTTCCGCTATATGTCACCAATC ATATTTTTAATGTTCAAAAATGTTTTCATAAATACGACATTACAAGTTCC TGTACAACATCTCCACCAAACATTTTTTGTTTTCTTCAACTTTGAAAAGA TTCCTCTGAATTTGCGATTTAAACATAATTGAAGATCCCATGCACATTGT CTCAAAATTGTAGTTAAGTTAGTTTTGAAAGTGACAGTGAAGGGGCGATC CATATGGAGTGTAGATACACTGCAGAAAACCGTTAATCTGCTCATTGCAC ATATAGGCTCCTGTATAGATTTGACCAGAATATCCATCGATGTATTATTC CTATATGAACCACGGATTTTCACCACCATTTATGTCTTTAAACCATAATG CTTTCATCCCTCAATCGTCAAAAAGTTGATAAAAAATCTAATAACGACGC CATTTACGTTTTCGCTTCATAGTTGGCGGTGATTTTTCCACGATATCATA ATCATCAGCCCTACAAGCCGTACATTTACACGTGGTCGGCACGTGAATAG GAACCAGTTTTTTTTGGTTGAACAGACAAGAAAATTCAACATTGAAAATC TTGTGAGCAATAGGTTCACAGCATTCACAAGTGTCTTTCTTTCTTGAAGC CATGTAGTTATCATCAAGCACAAGCACTCCTTCCAAGCCTTCACTACTGA AACAAGATCCTTTGCATACGGGGAATCTCGGGAAATGACGATCTCGGCAG CCGTTGATATGGATAGTTTTTGGAACGAACTCTTGACGACAATTGTCGTC TATGCTAACGATGCTGGTAGTCGGTAAACAAAATGTTGCGGTCACCGACA TTGATAGGATTAGAAACAAATTGAAAGTATTCATGTTTGTTGACTGGCGA GTTTTAGTTTGTTTGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027331TCONS_00027331Clytia hemisphaericatranscript
TCONS_00027330TCONS_00027330Clytia hemisphaericatranscript
TCONS_00027329TCONS_00027329Clytia hemisphaericatranscript
TCONS_00027328TCONS_00027328Clytia hemisphaericatranscript
TCONS_00027327TCONS_00027327Clytia hemisphaericatranscript
TCONS_00027326TCONS_00027326Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000616supercontigsc0000616:31512..38278 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.65 0.52 0.26 0.22 1.71 1.01 3.23 2.81 1.06 1.38 1.5 1.32 12.4 7.06 21.06 13.85 6.76 42.32 0.58 0.67 0.21 0.28 1.01 0.86 0.12 0.32 0.3 0.15 0.67 0.83