XLOC_012846 (gene) - C. hemisphaerica

Overview
NameXLOC_012846
Unique NameXLOC_012846
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000435:257762..263877+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012846 ID=XLOC_012846|Name=XLOC_012846|organism=Clytia hemisphaerica|type=gene|length=6116bp|location=Sequence derived from alignment at sc0000435:257762..263877+ (Clytia hemisphaerica)
CTGGTTCAGTACAGAACATTGATGGTgaaatgaaaactaaaaatgtatAT AAAAGGTTGTTACTTTTACTTTTTCGTTTAATCTGCACTCACATGTCAGA AGAGCAcacgaagaaaaaataaaaaaatctagaaaCATGTTAGTTACATT TATTTTGATCCTATCATTGGGGTTGCTGCACGGGAAAGGTAATTAAGATA GATTTTTGTGTGTTTATATCCCTGATATATTTTGCAAATAAGGTATTATA ATGTTGGGAGATCCAGTCATTTCTACTAAACATTCGTAGCGAGATTCCTG AGcttttaaggcttggggacacgagaagtttttttcgcattggtgcaatg caacatgctctatccctCCCACCTGTAACGCTTTTTTGTGTCtacacccc atttttctttctgccaaaaaaagtgaaaatcactttttgtcccatgaaac aaaaaaagaaaccggaacacacacttttttcttgtgttggtgggaaaGAG CATGTTGCAATGCACCaatgcgaaaaaaacttctcgtgtccccaagcctt aaaagctcaaaatcatCTATTCGGCAAATAGGAACTTCGGCTttccaata gaccttatcggagtttacgatttttctaaaaaagtgatgcattgtgtgat tgttttgagtgtattacaatagaattccctcgaggaattcctaagagatt tctattgcaATACACtcaaacaatcccacaatgcatcgcttttttagaaa aatcgaaaactccgataaggtctattatctCTCTGTTAGTACATGAATAA AAATATTGTGCACCTTGTACAATGAAATAAAGGCTACCACCTTATTCTTA ATAATTTTCAGAGTGCCCGGTTCGATTCGAAAGAAAAGGATGCATCAAGA CAAACCGAGTTGTCTATCACACACAAATTGCAAATAACAGAGATTCCAAC AGTGCCGTTTTTACTGGAAAGCAGGTCAACTGGTCAAACTATAAAGACTC CCTTCAAGAGTAagaaagtacacgtttttttataagaacaaactatataa gaacataaggcttcgctagctaaaatgttaagaacaacttaagaacattt taagattttggactcaaaaacactattatttaggaaaatggtcaaaaata ttcacaaaatgatcaaaataagaacacgtcgagaacatttttaggcttaa aactcaaaaagttaagaacattcgaaggcttcaaaaattttggatgtttt tatataaaaacgtgtattattaCTACCGCCGAAAAGTAATTTTGGAATTA TCTTCACattctattatttttcaaaaccccGTGTAACctccattttttcc aatatttgacAGTCTAACCCTGTCGATttaaaatagttttcaaaatgttA CACCGTTGCTGGAGTTAATAAAATAAGTCAACGATCGctaaggcgaggcc aatttaatttgttgttttacggatcaagctacccaaaaaaagagggtcgg tcggccggcgaaaaagtaaaataaaagtaaaatttcacctataaaatgtc ctaaaaaggcagcaaaaactgccacatattgacaaaaatgtgaaaaagaa aataaaaagacacaaaaagcttgAATTCATggattaaatgaaaaattaaa aatgaaattctcaaaacttggGAAAACTgccaaaatcttttcaaaatgtt aaacTGTTGCAGGAGTTAATGAAATAAGCCAACGATAGCTAAACAAATAT TCATTTATTCTACTGACAAAGTGACTTCGTTTTTTCTACTAAGGTTAGCC TGTGAATGTGCAAAGAGAGCGTTACAACATGGCGTTGCTTTTGCTTTGGG AAGTTTCGCAGAATGCTGGATAGCTACCAACGAGAAAAACTTTAATATGA GTTTAGCAAATCCTTGGCAAAAATCTGATCGTTGCATAGGACATGATTTC AAGAAGTGCGATTCTACACACAAACTTTGTATTGGTGGAATCGGAACGCA GTATGTTTATCACATTGGAGATCAAACGGGTATGCTTTATTGATTGTTtt ttcagatgagatggagtttaataattggtcatttgaagtgataaaaatga cgcgatctttagaaaaagtaacaaaattactggttaacgaccaaccaaat aaaataagagcttgtaaaaactccatcttgtcactttttttttgcaattt cgaGGATTTCGAAAGAAGAAATTAGCTTCTCTTGTTACGCATGGCCTATT TAATTACCATATTGTTCCTTCATTTTCTATCACAATTAAGTTAGATCTGT AAGTTAGAacatcctctatacgataaaaaaaataatcaatgaaaaataaa aatcctgaagctcacaatatctcccgacaaacctgtatactttttttggt gcacccggtagatgTACATACTACTTACACTACATACTATCACTTACAGT GACATTTTCTGTTCAACTTACTTCATAGTTGATGGTGAATGGGGAAGCTG GAATTCCTTCACAAAATGCAGTAAAAGTTGTGGTAGGGGATTTCAGATTC GTTCAAGATCTTGCAATAACCCACCACCAAAANAAGCTCACAATATcccg acaaacctgtatactttttttggtgcacccagTAGATGTCCATACTACTT ACACTACATACTACTTATCATTTATAGTGACATTTTCTGTTCAACTTACT TCATAGTTGATGGTGAATGGGGAAGCTGGAATTCCTTCACAAAATGCAGT AAAAGTTGTGGTAGGGGATTTCAGATTCGATCAAGATCTTGCACTAACCC ACCACCAAAAAATGGAGGAAAAGGTTGTCAAGGACCAGCCACAAAGAGCC AAGTCTGCAACGTCAATGCTTGTCCGAGTgagtaatacacgtttttttta aaggaatatccaaaacttttgaagccttcggatgttcttaacttactgaa attttaagcctaaaaatgttcttaaaatgttcttattttctccattttgt gatcatttttacccattttcctaaaaaatcgggtgttttcgagtccgcaa agccttaaaatgttctcaacttgttcttagcattttggacATCGAACCCT tgtgtagtttgttcttattaaaaaaaaacgtgtacgctaTCTCAAGTACT AGTATTGAAGTGTTAAGCACCAAAGACGGGTCATATCAAAGATTcctaaa atggtacttgatgcctctctgcttgatgttcaGTAATTAAGAGAATGATC AAGGGTAAAGAGGGAGGTAAAGAGGGAAGGagggaaggatcaagggtaaa gAGGAAAGGAGTGACGCTCTCACCAACCTTCGGCTAGAAAAAGAAACCTT TGGGTTGCCTCTGACTGCCGACTAAAAAGTAGGTCAAAAAGATCGTTGGA GTTAGAAAAAGATTAATTACCAGCCTCTAAGAACATTTAAGAAAACTTAT ACTTAACATAAACACACCCCTGTATCAAATTTTAATATCGCCTTTGACGC AAGGTATATTTTTAATATTCTAAACCTTAGTCAATGGTAAATGGGGAAAT TGGACTTCTTTTGGCGCTTGCAGTAAAAGTTGTGGTAGGGGATTTCAGAT TCGATCAAGATCTTGCAATAACCCACCACCAAAAGATGGAGGAAAAGATT GTGTAGGGCCAGCCAGTGACAACAGAGCCTGTAACGCACAAAACTGCCCA GGTAAAATTATAGCACTAAAAGACTAGAATTTCcctgaaacgtttttttt aaatagtcaGGAGGAGTCTTCTGTTTCAGTATTCGGCCCTAAGAATATGT TGACAAAATGGCACGTGAACGTCGAGATATCGTATATACTACGAGAAATA GGTGTTCAaaactttcttgtttttatctCAGGTAATACCACTATGTGGTA TACTTGATATCTATCTttatgttgaacggtgaaaaagaatgcggctataa tattttgattttttgatatcCATCTTTATTATTCATTAAAAGTTGACGGC AAATGGGGCAACTGGACTTCCTTTGGACCATGTACAAAAAGCTGTGAAGG AGGATTTAAGATTCGATCAAGAGCTTGTAACAACCCACCACCAAAATATG GAGGAAAAGATTGCGTAGGGGATTCTGTTCAAAATAGGACATGCAATGTT CAAAATTGTCCAGGTACACCAGGGTACACAGAGTTTTGTTTTAGTGAATC TGTACTTCATTTTTACTATATTcgtattaaaggttttgtttttaagtaag agtaatatcgtttgcttactcatcaattttgattcacaagctttttcaca ttggattgaaacggatgtggagcatgattggtcagaaagaggaaaggaaa aacactttttgcttaTACACcgttctgatatgaaacgggaacacttatgt aaatataaaacctttaattttgaATAGGTATCCTTTAATAAAAATGAGCT TTTCTATTTCTAGTCGATGGTAAATGGGGAAATTGGACTTCTTTTGGCTC TTGCAGTAAAAGTTGTGGAGGAGGATTTCAGATTCGATCAAGAGCTTGTA ATAATCCAATACCAAAATATGGAGGCAAAGATTGTCAAGGAatgttcaaa gaaaatagaaccTGTAATACACAAAATTGTCCAGGTATATTGGTACAATC TATTAACTCTTTAATTAGAACTGAAATATTGGCCTCCGCAGCTAGCAAGT GGTATagattactctctgtaattcgaaagaaaatttttcggtCCCTTGAA ATTCGAGAAATTCGAAATGAGATCAGCTGTAGAGATTTTCGCGTGGAATC AAGTTTTGCGGCCTCTTTTTGTGCCTAATACTGTATCATTCATTTTCCTC GTACAGAGGTTCTGGAAAATAACGATATTTTGGAAGGATTAAATTACGCG TAGATGGCCAAAAtttgcgagaaaaaaaataatccgGTCTTATAATTATA TTAATTATAAACGGGAACAAAAACAATCTTAAAACTTTATTCTATAAAGA AACttaaataaaagttttattaaagttccttgcttctattttctatatat ttgtttcttctgttttttttcCACAGTGAATGGTGGATGGGGAACTTGGT CACTCTATGGATTATGCAATAAGAACTGTGGAGGTGGTACTCAGCAACGA TCAAGAACATGTAACAATCCAGCACCAAAGTATGGTGGAATTAAATGTCC CGGTGTAGCCACTGATAACCGCGCTTGCAATACACAAAGCTGTAAGACCA AATTTCTATGTTAGAAATTTTCTTGAAGCTCCTCTGGCTGGCTTCACTTT AATACCAGTCGGTGAACGCCATTCAAACACCCCACACTCAAACGCCCAGA CGCCGTTCATGATTTATTACTGAGTACAACTATCCTCGCCTTCGGTAGTA TACTTCAACCTTCGACGCTTACAGagacaattttcaaaaagtccCATAGA AAGgctattttgactttttgttgttttttataaccCAGAGACTTGGGAAG GTAAAAAACTGACTCTTACAGTCCGCGCATATCAAGCACCTATCTTATCT ACCACTAACCTTCGTACCCATGCCTCATCCCTTTTTTTGATTGATGAGTA GATTAGCCCAGGGCTGGTCTGGATTTTTATCGCGTGAATGAGGCGATTTA CAGAAAATTCAGTTCTGAAACATTCCTGAAAAATACCTTTTCATGCTCTT AATCAATCAAAGGCTTTCGTTTTTTCAGGTTGGTCTTCTTATTATGAAGT TAATCTGTGTAACGGAAATAGCAAAATGATCAAATGCCCAAAGGTTACAC AATTAATTCGATTGGCTGATTATTTCTATGGTCGCCAATCATCTACCGTC TGTTCAACATCGGGCAGTTCGGGTTGGTGGCATGGAGACAATGTCAGATG TCGGGGTGGACAAACAGCAATCCGTAACAGTTGCGAGGGCAAAAACTCGT GTTCAATTTCTGCAACAGATACAGTAATGGGAGGCTATCCATGTCGGACT GGACAAAACACATTTCGAACGAAACCATACGCTTATGTAAAATATAGATG TTATGGATAAACGATGTAATAGCAATTTCGTTTTTCAGAATATATTCGAT AAGCATTAAACAGACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022854TCONS_00022854Clytia hemisphaericatranscript
TCONS_00022855TCONS_00022855Clytia hemisphaericatranscript
TCONS_00022856TCONS_00022856Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022855-proteinTCONS_00022855-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000435supercontigsc0000435:257762..263877 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.55 0.44 0.15 0.15 0.69 0.37 0.39 0.4 0.77 0.58 0.67 0.96 29.47 25.65 230.83 299.48 18.33 20.99 62.48 70.72 4.7 3.04 44.71 43.68 48.47 64.91 3.61 4.4 192.46 250.98