XLOC_012553 (gene) - C. hemisphaerica

Overview
NameXLOC_012553
Unique NameXLOC_012553
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000414:183979..191693+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012553 ID=XLOC_012553|Name=XLOC_012553|organism=Clytia hemisphaerica|type=gene|length=7715bp|location=Sequence derived from alignment at sc0000414:183979..191693+ (Clytia hemisphaerica)
TGCAGGGAAGCGTAACTGCTCTTCTTACCAAGAAAGATGAGACAAACTCC
AAGAAAAGATATTGCACCGATTTCGACCTTGGTTACGTCATGGAGCGTAA
CGTTGATGAATTGTCGGGTGGAGAACTTCAACGTTTCGCTTGTGCTGTTG
TGTGTGTTCAAAATGCTGATGTGTAAGTGAGAAACTATTATTTGCTAAAT
TCAATAGAGAATTTGATTTTATAGTAACTACAGTTCTGTGCACCTTCGTC
ATTAAAAGTAAGTGAGTTGGATCTGGCTGCTATCATCAACAAATTTCGTT
CAACACgttttgttatatatttttcagatatatGTTCGACGAACCATCTT
CTTACCTGGATGTTAAACAACGTCTGAAAGCTGCTTTGGCTATCAGAAGT
TTAACCCAAGAAAACAAGTAAGTGAAATGGTGATATCTCCAGTGCACTCA
TTATCTCAAAACGCTCTCGTTCTATCTTTCATGAAGTGCATTTCGAACTT
GTTCAAAACTAACGCAtacttttcaacttttcttcTTCAGATATATTATC
GTTGTGGAGCACGATTTGAGCGTTTTggattatttatcagattttatttG
TTGTTTATATGGCACTCCTGGTGCTTATGGTGTCGTTACTATGCCTTTCA
CCGTCCGTGAAGGTACAGTATCACAGTATAATATTTTACcgtcaatttct
attttttcgaAAGTCTTATTCTCTCTCAACAATGATTTATGTTCTACATT
TGATAAGGCTTTCCCTTTGGCAACTATTTGGTCACTTTTATTCTTTTGAC
CAACCATCAGTCCATCTTTATCGCAAAGTGCGTTAAATAAAATTTGCCCA
TTTACCCATAGGTATCAATATTTTCTTGGATGGTTTTGTTCCAACTGAAA
ACTTACGTTTCAGAGAAGAATCTCTCACCTTCAAAGTTTCTGAATCTGCT
GAGGTAAATTTATCAATGTATAACCCCCGGGGTTCTAAGATCCCGTTTTG
TTTCTTGAATTAAGTTCAGTCTTTGAACTTGTTAATGAAATGGTACTTTA
CAATTATCTTAAACTAATGTTCATTTGTTCATAGGatgaagaaattaaaa
gaatgaGAAGATACTCCTACCCTGATATGGAAAAGACATTAAGTACGAAA
GTCTACATTTTGATTTATTGGTTGAACATTATGTCAATTTCAGAAGCTCT
GCGATTTAAGCGATTTATCTAAGATACCGCTGTTTAAGACAGTACCGCAC
AAAGTTGATAAGGGGGCCGGAACCTTTCGATATATTTGACGATATAATGG
TTAGTTGTTTTGTTCTCTGCTAACAATTCTCTtccattttgtttttagaa
agttTCCATTTGGCAGTGAAGAAAGGAGATTTCACAGACTCTGAAATTAT
CGTCATGTTGGGAGAAAACGGAACCGGAAAAACGACCTTCATCCGTATGA
TGGCCGGTATCTTGAAGCCGGACAATGATGAAAACGTTCCTCAATTAAAC
GTCAGTTACAAACCACAAAAGATCAGTCCCAAATCGCAAGGAACCGTCCG
TATGTTGATGCACGCTAAAATCCGGGATGCATACATTCACCCACAGTTCA
TCACTGACGTTATGAAACCTTTGAAAATCGAGAATATTTTCGACCAAGAA
GTGCAAAACTTGTCTGGTGGTGAACTTCAACGTGTCGCTTTGACGCTATG
TCTCGGAAAGGTANGTTTTGTTTCTTGAATTAAGTTCAGTCTTTGAACTT
GTTAATGAAATGGTACTTTACAATTATCTTAAACTAATGTTCATTTGTTC
ATAGGatgaagaaattaaaagaatgaGAAGATACTCCTACCCTGATATGG
AAAAGACATTAAGTACGAAAGTCTACATTTTGATTTATTGGTTGAACATT
ATGTCAATTTCAGAAGCTCTGCGATTTAAGCGATTTATCTAAGATACCGC
TGTTTAAGACAGTACCGCACAAAGTTGATAAGGGGGCCGGAACCTTTCGA
TATATTTGACGATATAATGGTTAGTTGTTTTGTTCTCTGCTAACAATTCT
CTtccattttgtttttagaaagttTCCATTTGGCAGTGAAGAAAGGAGAT
TTCACAGACTCTGAAATTATCGTCATGTTGGGAGAAAACGGAACCGGAAA
AACGACCTTCATCCGTATGATGGCCGGTATCTTGAAGCCGGACAATGATG
AAAACGTTCCTCAATTAAACGTCAGTTACAAACCACAAAAGATCAGTCCC
AAATCGCAAGGAACCGTCCGTATGTTGATGCACGCTAAAATCCGGGATGC
ATACATTCACCCACAGTTCATCACTGACGTTATGAAACCTTTGAAAATCG
AGAATATTTTCGACCAAGAAGTGCAAAACTTGTCTGGTGGTGAACTTCAA
CGTGTCGCTTTGACGCTATGTCTCGGAAAGGTAAGAAATAATTGATccga
tatttaaaaaaatatacgtTACATGGAAAATGTCATGGTTAGTTTAACAT
GCCCCATATTTCATCTTTTACTAGCTCGGCTTTGAAAAATCGTCATTATT
TACTGATTTTGAGGGTATGGAGTATGCCATTGACATCAGTTTTTTGGCCT
AATTCGCGGGCACcctctcaaaaaaaattatctactACCTATCTACTTGC
GAACCAATTACATACGGTTGAGTCTTACGAAAGATGCTACGGGTCATAAG
GGTTGGCACCCTACTATTAATAGCATTGCTGTGTCAGCATAAGTATCGCG
CTGGGTCTGTATCTCAATGAGGAAATCACTTGTAGCAGTCTTTGGCTTGG
AGAGAGAATCATATACGCTTCTTCTGCTTAGGGCTATATTAGTTAGATTT
TAACAACGTTTTCTTTTCGTTTGTGTTTCCAGCCGGCTGATGTCTACCTG
ATCGATGAACCGTCCGCTTATTTGGATTCTGAGCAACGTTTACACGCCGC
TAAAGTCATTAAAAGGTAAACGAAACCTTATGTAGATGATTAAGAGTTGC
TTACTCGCATGGATTTAATGATATTAATAGATCGACATCCTGGTAACTTT
GAAAGGCGTGCTTTTAATTTTCGAATATTCTTGCTATTATATTTCCAATA
TTTCGAGCATATATACACCTGATTTACAGAGACTTTTTAGACTGGCGTCT
TTATGATTAGTTTTGAATGTGAAACTTCTTTTACAGATTTATCCTTCACG
CCAAGAAGACCGGCTTTATCGTTGAGCACGATTTCATCATGGCCACATAC
TTAGCAGACCGTGTCATCGTGTTTGAAGGGCAACCTTCTGTCGATACTAC
AGCCAATTCGCCCCAATCTCTTTTGACTGGCATGAACAAATTCTTGGAAT
CTCTTGAAATCACCTTCAGAAGGGATCCTGCGAATTTCAGACCTAGAATT
AACAAATTGAATTCGGTCAAGGTACATATGATTTGTTATATatgttatat
atatatatagttcAACCACGGTCAAACAACGGTACGGACAAAAAAGGCtt
tcattttacttttattGAAATAGAATGAggtttttttagatattttaacc
AAGGAACCTCTTTTTACCTAGATCTTTCGTTATTTCATTTGGTTAATACG
TAAataacaaaaatgtaatttttcgtTTTTAGGACGCAGAACAAAAGAAG
ACTGGTAACTTCTTTTTCATGGATACTACCGATTaaattcgaaattcgaa
ttgggacaaatatttttttcttgaatagGATTTATTGAAGAATAACGAAA
GATAAACAACGAATCGAAATGGAATAACATTACATgacttttcttttatt
tctgTTGAGCTTGAAGTCTCGTTTATCCGAATCTACTTTcgataaaaaaa
cattaaaaattcaTCAATCTTTCCTATCCATTACATGTTACTGTAAGGGA
GTTTTACGGGCCGAGTGCAAAAAGCCTTTTTTGTTcgttgaaattttaat
ttttgaccattatTGTGAGGGGTCCCCTTTAGTAAATGTTTGgattaaaa
acatgaaatctTTCGTTATTTGGTGCGAACAGTAAGGTTAGTTATATTTA
CACTTTTCGAAGAATGTCTCTTCTTCTCTAGTACAACCATCTTATTACAT
GTTATCAATTTTCCGTTTAGTATATGTAAGTATTTTCTGGTTTACACGAT
CTCTGATCATCTAAATGATTTCACCATTGcgaatgaatatttttggacct
accccggtggggtggaggtcctataaattaacccatgttcgttcgttcgt
tagtgtgttagttaccagcttttctcgagattggcNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNgctttcattttctttatttttttgtattttgaccagttatgtctt
atgtgtttcattgtttcaatgttcactgattagtttgataaccaggtagg
tccaaaaaagtatcgcttgttggATTTGTGGTAAGTTTTGTTCGGTATTT
ATTAAACTAAAGCGTTTTTTTAGTATTTCTAATTCCCAGGCCAGCTAGAG
CAATCTACTTGATTATGtttaaatgaatgaatgaaagaaatcgtggaaat
gacgtcataattatcTAATTACAAACCGATTTGAAAAGTTGACAACCGCA
CtcgtaaaataatttttttgtaacacATCTTTATTGGCTATAATCGTCTT
ATCTAACTTGTTTCTCATCTGCTTGAAGAGGCTAAACAGCTTGTATTGTT
TGACATGTGTACAAAACGGACATACTATATCTATCCTCCAACTGCTCGAC
AAACATAAGGCTCTCGAGATTTCGAATAACACGCCATGTTTGTAGGAAGC
AGGAACGCTGCGTATAAATACAGCCTTTTTGTGACGGTTAATGAGTTTTT
TTATGGTCGTGTTGTGAAGGGGTTTATTTATGTGTTACCTTTTATGGCTT
TTCattcgtttgttttgaaagttgtcTGAGAGGAGACTAGAGATCACAAG
CTTGTTGActtttaaatgataaattttacaaCTTGTCTACAATAAATGGA
TGTGAATTCGATTATTGATTTACTATGTTTAAAATTTATATTCTGttgta
cattttttttacaGAGAAATAACTAAAATATTACCGAGATGactcaaatt
tgcccaaattgcAAAAAAGCTGTTTATTTTGGTatgttttaacaattttg
ttttttttcatcctTTTGTACTACCTGGCCCCCGTTCACTACATTGAGGC
TTCAAGATTCCGAGGGTGTTGACCTGCTTCTAAtggatacatgtttttta
taagaataatgttTATAAGCACACTGAACCCTggatttgatgaaaaagtt
aGCTTATCAGTGAGCTTTGGTCATTGGTCactgttaaaggttttgtaCTT
GGGAAGGttcgtttttcttttctattttaaattacctaattttttttcgg
aaaaaaaaacatatcacAACAAACATATTGAGCTTGACTGAACCTGGTAT
CCcaaaaattattcttttaaaaaaacatgtCTGAGTAACCGCCTAATAAA
CAGAATGGTAAATTACGTTGCTCAAATACCTAAAGCAGTGTACACATTAG
ATTGAATCGCGAGTACTCATTTGACCTAACTTCATTTAGATCTTTTTGAA
ACGAGAGACTTATAAAAATAGAGTCAAAAACAGATCAATATCAGTATTTG
AGGAATTTTGATCTGCTTGACTAGACCTTTTGATTGGATGTCACTTCGCA
AATGaactttattttcattgttgAGACTTGACAATATAAAATGATGACAT
TGAAGTGTTCCATTTACAACTCGATTTACTTACAAGCTACAGAAGTAGAA
ATACCAATTTTACATGGCACTCTCTTCCTGATTCTTATTTCAATGGTTGA
GAAGGAGGTGCAATAGGTGCTCTATTAGTGACCTAGATCCCTAAAGCGTG
TCTCTTAACGACACTTGTAAGCAATATATCAGTGGCATTAAAGTCGGATA
GGTCGATGAGACAAACCCAATTAGCTTTTTTTTAATGTGTCATGAACTTA
GCCATGTGCTAATTCATGATTAGCAAAGCATATACCAAGACATTTGTGAT
GTTAATTAGTTTGTTAATGCCTACGCTAATTTAATtgtcgagaaaaaaaa
tatcaagacATAAGCTTGGTTTAAACGCAGTTGGTTTTGATATGACGAga
tatagactggagtcgtttataatgcgtgtaatacagtagtataggtgtta
tatgataatacaattaatgttacgggatttagtttgtataaacgactaga
agaatccggtgttccggcCTTATAGAAACCCGGACTTACTAAAGTTAATA
CGCTGTAATCGACGCGAGATACATTCTAGTTCTTTCGTGTAATTAAACTG
TTTTTATTCACTCATGATCATTTAACTGATTATTTTTTCAGCTGAGAAGG
TATCATCCCTTGGCAAGCATTGGCATCGTGGATGTTTAAGATGTAAGAAA
TGCAACAAGACTTTGACTGCAGGTGGACATGCTGAGGTATGCATATTTTT
TAGTAAGGGTTTTGCTTTGTTTCAAGTTTTTCTTATTATCATCATTATTT
TGCCGACAAGGGCTGGTGTTACTCtcaaaagttgaatatcttCAGTTTGC
AAACAATAAAAAGTCTCTGCCTTGTTCggctttaattttattttgtttct
gaTTTCTCTTTTCGCCAAATTAGATATAATCCAGAATTGATCCACCTTTT
AGGCGGGGATGTTTATTGTTGTCTAATCTTCTGTTTTCAGCACGAGGGGA
CACCTTACTGCCATGTACCATGCTACAGTTCTTTGTATGGTCCAGGAGGT
TTCGGTCACGGTGGAGCAGAATCACATGACTACTCCAAAGAACGAGATCC
TAACACCATCATGAAGTAAAATGGAAAATGActtcttcttcgaaaaacta
agATTTCAATTTATACATTTAAAGGATTTGTAAAcacaggaactttctaa
aaggCAGACTTGAATTGAATTTGTGCCTAAAGCAAAGTCACTCAAATCTA
TCTGCTGGCTTACTCAAGAAAGATTTTCAGTGATCCTTTGTGTACCTAAA
AAGTTAgatttatttattctttttagCTCCCTTATAAAACCTTTTTGTGA
ATATATGCAacatcgtcagtaaataataaATCTTCAATATTATCGTAAAT
AGAGTAGAAAGCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022375TCONS_00022375Clytia hemisphaericatranscript
TCONS_00022376TCONS_00022376Clytia hemisphaericatranscript
TCONS_00022377TCONS_00022377Clytia hemisphaericatranscript
TCONS_00022378TCONS_00022378Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022376-proteinTCONS_00022376-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000414supercontigsc0000414:183979..191693 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ABCE1ATP-binding cassette sub-family E member 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
187.04	183.64	102.58	86.48	91.8	76.66	181.85	189.27	244.19	227.27	250.72	275.96	297	296.32	281.75	284.86	244.29	289.16	179.62	206.36	247.42	248.98	182.7	188.93	186.08	212.66	227.64	279.2	113.24	109.08