XLOC_011265 (gene) - C. hemisphaerica

Overview
NameXLOC_011265
Unique NameXLOC_011265
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000348:205916..214385+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011265 ID=XLOC_011265|Name=XLOC_011265|organism=Clytia hemisphaerica|type=gene|length=8470bp|location=Sequence derived from alignment at sc0000348:205916..214385+ (Clytia hemisphaerica)
tctatcgattaactaaaatcgattcactcaaaaactgcaggagattcgaa gggcaaNCTTCTTCTTGGGCATACTGGAATTTATGTGGTTGCTGCATTGA TTTATGAAGCACTAGGTGAGTTTATCCACAGGAAAGtttcagaatatttt tttttcatatttacttTGACAGGTAAAGGGTTGAAAAGCATGCCCATTTT GTAGAAGTTCATTTTTCATGAGAAATCATGACCTCACACACTTTTCACAC AATTAATTTGTGGGCAAACAAACACTGATGCTTTTAACTCAATATGATAT TTAGTTGACTGAAAACACAGTTTAATTGGTGTCTTTTCTGATGTCATGTT ATAGGAAAGAATTGTGATTTTCCAAGCATAAACATAACATAATTTGCTTA TCATTTTCCAGGAATGCATAATTTGAGGAATGAAAATGTGNTTAGtcaca aaacaaataaaaatattcaacataCAATGCATCAGCACCCAAGATACTTT GATAATATTCTGAGTGACCAGGTAAGTAAGATGTTTCACATTTTAAAAAG GCAAGGTAGATCAGGGTAGGGTCTGTTGTTCACAAAAAAACATTACTATT CTGCCTAAATAGGCTAACAGAAGTTTCCTTTCAATTTTGTTTCAATCAGA TTTGATAAGTTATTGGAAATTTATGGTTAAGATAGATGTGTTGGTCAAAT ATTGAAGGCANAGAACAATAGTCTCAAATGATACTGTACTTCCGCTGTGC AATACAATCATAGAGTCTGGTAAACGTACAGCTCAACTTCATAACAGTGA ATGCCCACTGATGTTTACATATTACAACACTGACTATTTAGGtaatgaac aaaaaatagcaatgacagttttttttgttcgaactttgtaatttgaaatg tatGATCAATcttattttcttaatttcataatttgtatattatcaaaatc aacttatattttctATAGGTGCTGGCCATGGCTTATCCTCGATCCTGCTA ATGTTATTAAACTTTCCTGTATGCTTTTCTACAAAACCAGACGTGGAAGA ACTTATTAAAAAATCAGTTGATTATCTACTTCAATTTGAAGACCAGGGAG GAAATTATCCTCCAACCCCAGGAGAAACTCGGGATGATTGGAATGAGTTG GTCCACTGGTGTCACGGTGGCCCTGGCAATGTTTATCTCTTCACCAAAGC TTATATCGTCTGGAAAGAGGAAAAATACTTGCAAGCTGTTTTGCGCATTG GGGAGCTTGTATGGAAGAAAGGGCTTTTGAAGAAAGGCCCAGGAATTTGT CACGGTATAGCAGGTAAAACACTTTTCTTCTCCTAAGGGTGTCCAGACAG GCCTAGAGGTGGCATCTTGCCTGTCTGGAGGCCTGTCCAGACGGACTTGT CTGATTTTATAGATATGCTctatttgatttttcaaaaccttATGATAAAG ACTAGTCTTTGTTTTTATCCTTAGGAAATGGTTACGTCTTCCTTCTACTC TACCATTTAACAAGTGATGAAAAGCAGTTGAACAGAGCACGTCAATTTGC AGCTTTTATGCAGACTGAAGAGTTCAAAGCAATTTCACGAGTTCCTGACG CGCCTTACAGTTTGTTCGAAGGCATTGCTGGCACTTCTTGTTTCCTTTCT GATCTTGTCAACCCTGATCCTAATTCAGGAGGGTTCCCTTTTATGGATGT TTTTTAGAGATGTATGATGATGATATTTATTTTGTATATATTATTCTGTT GCTTTACTTAGTTAATCCTaaatttttgtatgatttttatgatTGAAATT TAGTTTTATTAATAATGGTAGATGATTTATAACTAGGGTTTtgtatattt tacttttttaaagtACGGTATGATGCACAGCACAATAACTTTCAAACGTG TTCTCTATTCAAAGTAATCCATCTCCAATCTTTCAGATCTTTGTATATAT TGGTATATTTCGATCTTAAGTTTATTTTGACGAAGGTGTTGTAGTTAGTG TTATCAAATCTTAACAAATTCATTCTCGTTTTAGACAACTGTAAACTATG ATGTAGTAattgaaaagaacaaaaaggaAATAATTATGCTTACCCAATTG CGTCAACAACTTGCTAAAAATAACTTGAGGTAACATACATTTTGTAAGAT CTAGCACTGATGATAGTTaccaaaaggctttttttttttttttttaattt aacttgTAGAATGTCTACTTTTAAATCAATTTGAGGTAACATATTGACGC TTAGCACACCATTGAAATGAGTTTCAATTCTTCATTCTTAActttcaagt ttcaatttaaGGAAAGAGCTCGTCCCtatttctatattattattattttt atttcatttcagcTCAATTGTAGGTGCAGCTAGGATTAAAACTAAACCAC CCAACATTGTGATCAAAACTGATTGCGTCCAGAGTTACGAGAAAGCTTTA TCAGTTCTCAATTCTGTGATTGACAAAGAACGTTACacacttcaccatgt agtatcGAAAAACTTTCTCCAAGGTTCTTGGAAAGGTTCATGTTCACTGC TTCTCTACAATGTAGTTGATGAACTCTGTGAACAATCAAAGCCACTGATC CAGTCTTACGTACAAGATTGCGATGGCAAAGTGATCATTTATTCTGACAA CACTGAATCAAACACCTCATTACAAGACATCAAGGAATTTACTAATGGTG AGATACCATGTTGTAAGGTTGGCTAgcttttcaaataatttcacTCACTT CGAAAAAATGAACCTACAACTTTTCGCTTTAACAACTTATCTAAAATATC ATGAgagatgtgtttttttttctcagataTAAACAAGCAGTATCCTCATC AAATGGTCATGTTTGAAGAATGTATTGACTCCATAAAGAAATAtgatttg gtttttgttttgaagttgATGGGGATGAGTTGTACAGAAGAGACACAGCC ACCCTCTGGCGAGCATCTCCTCACTAATGCATATTTACTGTCCAGTAAAA AGgtatttccttgttttttttttcgatgatATTTTTGATATCACTACTCC ACATTACAAGAAGACGGAGAAGGAATCAATTGAGATATTATAatgatgtt ttttgaaaatcttgatgAATGTTTGTGATTAAAAAGCTTTCTCAGTATCT TGTTTTTATCGGatctacctggaggtcctaaaattaaacttttctcgata ttggctcattatttttctttctgattttgGCACAAAGttacaaaatattt tgcacatagatgcccACGATCAAGCATAATTCNatatgcgttttttgagc tgaaaaattctttttttacaaaaatctgcttgagccatcttttacctact ttcatgcaaatagtcagaaaataacaagtccaaaaaaccctttttttagc cgttttttagctgaaatttacccaaaaatatttttttcaaaaatcgagct ccgtcacattctttgtgcaaaaaatcgtaaagaataaaagagccaatctc gagaaaagctaatacctaagtaattgatagtgtgcttataaataaatatc gaatttggccagtttttctataaaaacaNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNtgggaggtaaacaaagcgcgatattgcggttttcaggcaa aaagccttacaaaacacccaaaatattGATGCCAAAAGAGCCTCCAAATC AACTGAAGAACCAAGTTGTTGTTTTTCCCTTTCTAATAGCTTCTGCTAGC ATCTAaaaaagctttgttttgtttgtttttttcaaattcagtgtatTCTT AGGAACATATAAAAAAGCCAGATATAAgcaaacaagaagcccgttggctt gaaggcccagcaaaaagtaacgtgttgaaaacgagcgtgcaaaacagcaa atgtatgacctTGTTGACATTGATCAAAGTGAAGacgggaaaaaattttc caaagtcaccgctgtacttctcattggttagacgcttgaaattttattga atggtctcctaccaaccGGGTCTACAGGCGCAAGTTCACCCGGttgaata ctctcgggtaccgtgagattgggtaacttgcaaNtctatctcattaaaaa aattgagtaatttgactaagaacattgatgtatgcttattaatagtgatt cttatagataaacatgcgttttttgaaccaactataatttttttgcaaaa atctgcttgaaccgtATTTTACCTATaatggtaccttactttcctgcaaa aaaatcagaaaaaattaatgatccaatttttcacaaagtccaaaaaaccc atttttagccgttttttggcccaaatttgcccaaaatttttttttgaaaa tcgggctctgtcacattcgagggtttatagttatgcatctttgttcaaaa aatcgtaaagaatgaaagagccaatctcgagaaaagctaataacgaatga acagacgaacgaacgaacggacaaaggttaatttataggacctccaccgg ggtaggtccaaaaaagccGCGAATATATATAGTGAGTGGGCGCGTTNccc cccccccccccccggggcatgttagttggaccagaccgtaaaacagaaaa ataatctttaaaaaactagacgatgaaatagtttacggtctgcatatcaa ggctaataaaattcatgtggttTAATATGAGTTAACAGTTAatgtgacag atccagaaatgaccattttcactgttcatgcaTTGTAACcatgaaaaaca tttcaatctagttcaaatttacccataagctgcattttagtgtccattaa cagattccagaatcagtttatactTTAGATaattatgtgagtcgagtttg aaaaatcaagccaccgatcgtttaatgcgacagatccagaaatgaccatt ttatttaatatacgtgtagaatcatgaaaaaagtcccaatcttgttcaaa tttacacatgagctgcatagtgtcctcctgggttggttccccccactaaa aatcaaaatttttctccattcccccctcttttatttcccccacTATATTT CAAAATTGTTCGGTTCCCCCCTCTTTTTTGAATTCCCCCAGCTATTTGAA GATTTTGCGGTTCcccatatggttaacataaaaatgccttaaatcaagtt tgaaattttggaaagcttgaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNAAAAAATAGCCTTGAAagtgctggaaaaatgaaattgtatt gaaaagttggtttatcccaaaagatttgctgattttattgcttaaacagg ttttgcaataagatcaccttgagatcagtgaagttcccccagtcaaaatc tcctaaatttatggttttcccccctctttattttcccccagcaaatttca aatttttcattttcccccatactttataaaaagggccaaaatcagaatcc ccccccctttataaagggggggggaggacactatgagctgcattttagtc tccattaacaTGATTCCATTATCAGCTTATTTCaaataattctgtgtcaa gtttgacaaatcaagccaccaatcgtcaaacgagacagatccagaaataa ccattttcacgcgtagcatcatggaaaaagttgcaatcttgttccaattt acacatgggctctattttagtgtccattaccacattccagaatcagttta ctttgaataattatgtgttcagtttgaaaatcataccacgtcccaccact gACCACCGTTGTTTTGTTAACAGCCTGAACAGCGACaaatccagaagtga ctgttttcttatgtagcatcaagaaaaaagtttcaatcttattcaatttt acacatcagctgcatttcagtctatttatttctatatcagaagccattat ttcctaaaaNttatttcctaaaaatttataaagtctttttgaaaacaaga aactaaaaatgaaagtgatttaaggtagaattttcactcataaaacttta tgaaaacttgagcaaatactgtaagatatggcagaatgttgaaaaaggtt tataaagaaaaataattacaaagtttctttggtttgaaagtctcttgacc actaaagcaaagaaaatgttcaagaaagtatgaatcaacctcctcgcttc gaccaccatcttgttttgttttgaaaattgttttgaaggagcgcggaatc agaaaataaatcttttatagccagtatccgactttagcaagcttttccct cttcagacggcaaaattaaaaagaatgttactggttttaagcgccgtttc taccaaaacggacagacagatACACAGACGAaaaaatgctaatgaaaggc cctcctatcgctagcgctgggccaatgaGCCGGAGAAACGGCTTTTCTTG AATCTCTCGAGCTGTTGTTGACATATTTTTATGAAACTATGCACACTAAT GCAAAATGGTCTTAGATATGACAGAGCATATTTAATTTTGCCCCCCCCCT TCGGTATATCTATATAATACCGAAGAATATTTTATAGAATGCCTGCAACT GCCCAGAGTTAGTTATTATATGCATAATAAAAAGTAAATTCGAATTAATC TCATTCAATTCCTATCTCCGGAACAGCAATGTCAACCCTCTACTGATATa gctcgatttttgaaaatgccggaagtatCCCGGAAAACTGGTTGTTTGAT AGTTTCTCGAGACTTCATCATTAGTTTTGTCTATTCTTTTGTACAAAGAT GTGTATCAACGATTCCCAAAATACGACTTAGTCCGAtttctttgttgttt tcttCACGCTGCCGACGACGTTTCCTCTCCTCCCATCAATCAatgatgga aatttttaatatttctatctaactttcatcatcaatCAGCAACAGCTTGT TTTTAAATATACTAATATATTTTCTTCCTGACTATACTATGCTAATAGTC CTTATATACTCAGTAGAGAAGTGCCCTAAAGGAGTTCAAGGGACACTTCT CCTATAATCTAGCAATCAAAcctatttgttttcatttttcactttcaggt tgaagatattttcgcATTAAACGATGAAGGAAGTGTAAAGGGGAAAGATA TAACTTTGAAATTCTCGCCACAGAATGGTTCCCATAAAACTACCAATGAT GAATTTGTTGTTATAACAAACACGtctaaaaatgatataaaatcaTCATT TGATGTTGAACTTTACCAATCCAAGCTGAAAACTGTAAAATACGGCCAAG ATATTATAgtcactgaagtgattaactcAACACACACCATTTTCACTGGA GTTAATGTCAATTCGATACAATCTGATGGTTTAGTTGTTCATGCCAGGAG ACAGTTAAAAGGGAAAGGGCGAACCGGCAACCAATGGTTATCACCTCTAG GTTgtatgatgttttcaatgcaatttGATATCCCAATGAATAGTCCTCTT GGCCGAAGTCTTTCCATGATTCAACACTTAGTTATTGTAGCATTTGTTAA ATCGATCAAGGAACGTGGCGATGGTTATAAGGATTTAGCACTTGGCATCA AATGGCCAAATGATATTTACATTGATGGTAAGATTAAGATTGGAGGTATT ATAGTGAATACTTGTTTATGGCAGAATGATTTTAAAGTGACCGTTGGATT AGGGGTGAATATAAGTAATGACAAGCCTACTGATTGCTTGAATAGCTTGA TACGTCATTATAACCAAACGAAAGGTGCACAACTGAAGGAGTTGGTGATT GAAGATGTTTTGGCAGCAACTTTGAATGAAATTGAGAATTTGGTTTATGT TTTCCAAAATGAAGGAGCACAAAGGTTTAAAGATGAATATTATCAATATT GGTTGCACAGGTCTGTATCTTTTACATTATTCCCTtctaaattatctttc caacgagcgGGTCGTGAGAAAAGGGTAAGATTAAAGTGTCCATAAACTTC TGAGATAGACTTTAATATCCTAAATCTTCAAGCAAGTGTTCATAGATgtt caaagatttttcattcTGATATCCACACACATATTATACCCTGCATGACT ACGAAATACCATCCAGTAACAGTGTGCATTAATAGacagtatttttttct ttcttttttaatcattttagtGGAAGGAAAGTGACATTGGAAAGTTACAA CATGAGACAAGCTGAAGTGGTTGGAATTGATGATTATGGTTATCTGGTAG TCAAGATACTGCAGAATGGAGAAATAGTGACGTTACAACCAGATGGAAAT AGTTTTGATATGATGAAAAATATGATCAAAATCAAATCGTGACTCACTAT CTGAATTCTTcctcaatttttttgttaacccaaatattttaaatgaattt tctaATATTagaattattttgtaaatttttaataattcaaAACACCAAAC AAAATTTTACAGCTTATCGTTGTTGTTTTTTGCAACATTGCTGTCGTGGG ACGAgaattttataaagaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020041TCONS_00020041Clytia hemisphaericatranscript
TCONS_00020042TCONS_00020042Clytia hemisphaericatranscript
TCONS_00020043TCONS_00020043Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020041-proteinTCONS_00020041-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:205916..214385 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.8 36.49 18.56 18.4 18.16 17.37 20.73 22.52 26.65 25.04 20.03 23 14.86 13.83 16.71 17.49 25.06 23.38 6.38 8.41 21.26 18.64 56.41 48.79 10.75 13.52 14.7 13.06 22.72 25.27