XLOC_010617 (gene) - C. hemisphaerica

Overview
NameXLOC_010617
Unique NameXLOC_010617
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000313:282854..286586-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010617 ID=XLOC_010617|Name=XLOC_010617|organism=Clytia hemisphaerica|type=gene|length=3733bp|location=Sequence derived from alignment at sc0000313:282854..286586- (Clytia hemisphaerica)
TTACAAAATTGTTCTTTAACTTACTGTAATAAAACTGTAATAATTTTGTC
ATTTTATAGTGAACAGAGAAAAATGTCATTATATTGTGCTGATAATGCGT
GTTATATACCTATCGAAGCTTCAGTTTAAAAGTTTGAAAAAAGAAATTAC
ATGTTTACTCAGCTTTATTTTTGCTATATTGGCAATCATCCAGATCACAC
ACCACGAATCAAGAGTTAATTATCATTGCTTGTTGTTTGGGAAGATATCA
GAACGTGACCGACTTTTCGAGGAAGGATCAATTCCATTATGTTTGCTTTA
TGTGTTGACTCAATATTTCATGGCCTTCTCATCTTTGTTCCTTTGGTACC
ACACTAGAAAATTCCCAGAATTCTCATGGTAAGTATTTATCTCAAAGCTA
AATTTAAAAAAAATCAAAACTGGATCAAAAATCGAAAAAAGATTTCAGGA
TATTTCCTTCATTTTTTTTTCTTTGAAAATTTGTATGATTGAAGAATGGT
TTGGCCATGATAATCATGAAATGCGAGACAACTCTCTAATAAATTCTTGA
TGAAGAATCGTTTACTTTTTAAAATCAATTGTTCGGATATAATGCACACA
ACCAGTACAACTTCCAGGTCAGAGTGAAATTAATATCCAATTTTCTTTCT
TCAGGGCAGGCACGATACAATCAAGAATATGCTGGGCTGTCTGGTTTTTA
TACCTTTTATCCATGTACACCACAGTGCTTCTAGGGATACGATCAATTTG
TAACAGTCTTACAACACCCATGTATATATTGTCTTATATTAATAGCCAAG
TATTTTGTTGGTCACCTTCTGCGCCCGAAATGTCCCTCCCCTCATTTCAA
GGGTAGATCATACACCACTTTAAAAAATCTCTGATTTGAAAACGAATTTC
CAGAGAGCCAAGGTAGAAAATTTCCCCACCATTCAATTTTTTAAGAATAA
AAGTCAAGTCTGTTACTCCACCAATATACACCTACCATAGCGTCAGCCCG
CCCTTGAAGGGGGGGGGGGGGGCAGGGGTTACCTTAAAATATACCAATAT
AAAGAGGGGCTGGAAGTCTACCACTTTTTTGGGGGACCTAATGTACCTGG
GGGTTAGAATCTAATCACTAAGTTTAGGGGCTGAATGCTTCAGCCAAATA
GAATCAATTTTCCCTGGAACAATATTTGAAAGTATTGAAGTTCGAAATTC
CCAGGGGCAGACACTTTATCTTACATAAAGGTAGAGTTGTATATATGCCC
TACATACGGATGAACAGATGTTTTAAAAAACATCCATTATTCATATTCTT
TTTTTTACATTCTAGTTGTGATGATAGCATGATTCTTTACATCGATTTCA
AAGTGTTCAAACCGAAATATTTTGACGCTTGGTACTTTCTGCGTTTTTGG
AAAAGATCAATGGTGAGCTTTTTACTGCTTTACTTCGCTGTGAGAAACTG
TGTATATAATATACCCCTTACTGACTTACTTACAAGGGTTAAACTTTGTA
CACAGATCTCGAAACCGAAGCATTGCTTTTCTTAGAATTACTTTCATGAA
ACTGTTAGTTTTAAGTTTGAAAAATTTAAGCAAGTGCTGACCATTTCACA
ACCACGAAATTTCACCTAGTTTCACTTTTCAGTGCCTTGTTTGTTGCACA
TTCTGTTTTTTGAGATGAACATATACTCTCCTTTTTTGGAAAAACTTTTC
TTTCAAAATCTACCCTTTCTCTTATAACGCATTTCCCCTTATGCCTTAAT
AACTTTGGATCTCTTTTTGTATTACAAATTTAAATTCGTTTAACTATCAA
TTTCTTTCTTTTTTCATTAGATATTTTCATCCCTGTGTATGGTGTCAACC
ATGTTATTTTGTTTCTTTAATTGGTCCAGCAAAGATGACACGATAACGCC
CTCTCCGCCACAAGAGAAGTATACCATCGTGTCAGTATAAAGGAGGGGGA
TTTCTTATTGTTTCTACTTGACCAATAATGTGGGCTGTAATAACTTCTCT
GAATGCTATCAAGCTAACCTACCATATTATGCTCTTTGGCAGGTTTGAAA
CGTGTATGTTTCATTGTTTTAATCGTCCTACCTGTTGTAATTGGAGCAAG
ACAGCCCTATATTTAAAGAGCAACTATTTAAGAAGTATTTGAAAGAAAAT
ATTTAAAAAATGACGCTTGGATGATAACTTTTAAAATCTTTGATAATATG
AGAATAGACGTTTCCTCTTGTTTGTACATACTATTTTAATCTAAATACGT
TTGTAGAGTAGATTTGACGAACTAACTTCATGCCCTTTCTTTAATGAGAT
AAGATTTGGTGGTTTTTATGGGGACTGAAAAGTTTTGTTTTTAAATAAGA
GAGATATCGTTTGCTTACTCATCAATTTTATTTTACAAGCTTTTTGATAT
TGAATAAACACGAATGTGGAGCAAGATTGGTCAGAAAGAGGGAAAGAAAA
ACATTTTATTGTTTATATCAGCATAATAAAAAAATAGCAAGACACTGTCC
TGATATGAAATATGTGTCTGATATGAAACGGAAACATAAAAAATAAAACC
TTTAATATGGCGGATGCGCTACTCGAAACTTTTTCTGTAGGAACTTCCAT
AGACCATAGAGGCTTTCTGATACTGTCATGGAGTATAGAACACATTTTTT
AAATAATATCTTGGCTACGTTGGCCATCCGCTGTTATGATCTAAGCTAAG
TTAAAGTAGTTTTAATTGGAATAGTTTTTATATTTAATGTAGTTAAACTG
GGTTGCTTTAGCTGTATGATATTTTTTTTAGAAATGAGATGATTTAAAGA
TTAAGTATAAATTTTGACATAATTTATTTAGGTTAGGTCGGATTCTTTAT
GTAATTTTACTTTTTTTTCTGTTATTCATGTTTTCTCGTTATTTCCGACT
ATTACATTCACACATTTAATTTTTAATTTTTTATAGAATAATTTCATTTA
CTTCATTCTGAATTCCTTAACGTACTATAATTTTTGCGGTTTGGAATTTT
TCAGACGAATTTCTGTAATTGTAAATTTGATTCACTTTCAGCTTTAACTT
GCACCCTTTTACCCCAAAATCGAGAAAACCGTAAGAAATGATTCCATCGG
AAATTGTTTCTCCTAAGATTTTTTGCATTTGATTATTGTGTGTTTTGTTT
AATATTTCTTTTTTTGCGAAAGCCAAAGTGCAATTCTTGATGCTATACCT
ACGGAAACATTTTGAAAAACAGACTATATCAACAGTTTTATAACTTACAT
TTCAAAATTGGTGGCTAAATCTGTCTTTTTAAGTTTGTTTTCTCACAAGA
TATTATTGCTGTCAAGATTAATGTAATGTAATAAAAATCTAAGATAATTT
GCCTTGCCTTTAGAAATGAAAAACGATCCCAAAACCAGCGCCCTTTGTAG
ATAGATAGCATTTTCTTGAATTCTGAGTTTGTTGGAAATTACAATTGTTT
CTCATCAATCTCTAATTCCGTAGTCAATCATCTGATAAAAATTTTCCTTT
CTTGGGGAACTTTCCGATCAATCCTGGTTAACCGGATAGGAATAGCAGAA
AGGTCCACTTCTAGTAGTAGTAGGATGTTATCCCGGGAATCAGAAAATAT
TGCGGTTGTTCTATAACCGTATAATATAGTTTCGTTTTTTTTTATAACAA
TTGTTTCGTTTTTTATAGTGAACATAATGTTTTTACAACTATTTGGTTTG
GAAAAGATATCTGACTTTTTTAGAAATTCACGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018943TCONS_00018943Clytia hemisphaericatranscript
TCONS_00018942TCONS_00018942Clytia hemisphaericatranscript
TCONS_00018941TCONS_00018941Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000313supercontigsc0000313:282854..286586 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.16	2.3	2.86	3.52	34.07	24.89	22.27	22.8	12.95	13.76	10.65	9.75	6.2	5.18	5.11	5.46	6.59	7.42	5.74	7.46	7.94	7.84	7.85	9.26	7.03	9.31	12.61	9.74	8.86	8.39