XLOC_009572 (gene) - C. hemisphaerica

Overview
NameXLOC_009572
Unique NameXLOC_009572
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000259:173325..179550-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009572 ID=XLOC_009572|Name=XLOC_009572|organism=Clytia hemisphaerica|type=gene|length=6226bp|location=Sequence derived from alignment at sc0000259:173325..179550- (Clytia hemisphaerica)
AACGTTAAATATAATATTGCAATCAATTTTCAAATTCAAAAGCTTGTTGA GGTGAGTTTGGCATAATTTTTTTTGCAATTATTAACCGGAATTCCTTCAG TGTTCTTAGTCAAATAAAAAAGTGTCGTAAATGCCTTTGTTAGCAAGGGA AATTGCTAATGTTTATCTAAACATTGTTATGATGTCAACAGCAGAAGAGC ACAGAAAAAAGTGCTTGACTATATTTGATTTGTTTCCTTCGTGCGTCAAG ATAATTTGTTGTGTAAACTGAATTGCAGAATGTTCATCTAAGGTTCTAAC ACTGCTGTGATATAATTTGATAGTTCTGTAAATCTGTTCAAGTATACATT TTTCCATGAAACCATCATGATGGAGTTATAATTTTTTCTTCTTACCTGCT TTTTGCTTTTTACTATCCTTGGAAACTTTATTAATTGTTACAGTGATTTT TAATCGCTAGCTTGCTGATTAGATTACAAAAATAAGCGCATTTATTTTTT GTCAGTGATGAACAACCCAGAATGCCATTTTAATTAATCAATTGTCATCA AAAACTTTGAACTGTCATGCTTTTTCAAAACGGCATTGAATTACAATACA TGAACTGTCACATTTACTGAAATTTTCCATGGATTCGAATCTTCAGAATC TTATCTTTATATCTTGTAATGCCTTGTAATTTGCCTAAAATAAATTGATC GCTTTTGTATGTATTTTATGTCAACTTTTTCGAATAATCAATCAATTTTT ATTTTTATTTTGATCAACTAGTGACAGTTTGTTTAGCTCGGCTTCTACTT TCATAGTTGAAAAGTTCTTTGTATGAAATATTGAACTTTCTTGGGAAAAA TTTTATCTTTCACAAACCCTCAAAGGGTTTAATAAAAGATTATCTGATAC CGTTATTAGAGCCTATTCTATCACTACCTCAAAATACCATTGAATATATA AAGTGTTTAAAACCTTCTAAAACAATGAATCTAAAGTATTTATAAAGATT TATAAAACCCTTCGAGACATCATGGCACCATAAAACTTTTGTTATGATTA AGATTTTTTGTTATAACCTTTACAAACTTATATAAGAGAGACATAAGTCG ACGAAATGTTAACTTTCTTTATGGTAAAAGTTTCAAATTTTTATTAGGAA TTTCAGTTCATTTCGATTTGTCTTGTCTGAGAGAACACTTATTTGTTGTT TTATTCTGCCTCAAAACCCATGTGTTTGGAATTCATGCTTATCTATGATC CACAAAAAATGATGTTTGCTTTAAAACTTTGAACCAATCACAGCACTATT TACAATGATAATAAATTATTTGGCATTCTATTTAACGAAAAAATGGCTGC TTTCACAATTTGCTTTCGATGCGTAAACAAGCAAACATAACATCGTGGTA AATAAAAAAAACACGCAGTACTTAAATCTCCTTTGCTTTTAAAGTAAACA CAAATGTGTGTAAGAAAACACTTTGCATGTCAAAAAGTGTCTTTTAATAG CGACTAGATATCAATTTTAACGTTCATACGCTGATTATGCTGAGATTTTA TGACCCAAAATCAAGTCTAAATTCTTTCAGACTCATTTAAATTTCTCCTC TTTTACTTTATAAATCCCTAAAATTCATTTATTACATTGAAAAGTAGCTG TGATTACATATCATGATTGACTTTTGAATGTTTTGTAGAAAAAAAAACGA GAGCATAAAAAACTATCGACCATGCTATTTTTTAAATGAGCGAAGAGCGT CTGTGATTGGTTGTTTTTAAACAATACATAACAATGGAATTAAGTGTTCT CGAGACAAAAGAGCTTTAAATGACAGATGTCGTAATCAAATACGCCTTTT AGTTTGTTCCTATTGTTTTCAATTTTTTTTTGCGATAGAATAAACGAATC AATTTGAACGACATAAGAAGGACTATAAGACATTTGTTAAAGACAGTATG ACAGAGACATCAAAAGCATAAACATTGCGAACTTGAAATCCATGTGAACT CGCTGTATAGCGGTGGTCTATTTTATACAATTACATGAACAGTTAAAGAG AAATTATTATAACTCCATACATTTTAATTTATTTTGTGAAAAGAGAAGAA AAACTTATTTATTTATCAATCATACCTTCATCGATTAAATTTACAGAAAT GTCTACCGCGTTAGTATCAGCATTCTACGACTTCAATGATGTTATTCAAC AACAGGTTTGTCAATATAAATCTTTTCCTCTTTCACTATCTTACTAATTT TTTTGTGTTTTTGTTCAGGATAGTGGCTTTTTGAACTTTCATTTTCACTT TTAGACTTTGTAAGTTTTTAAACTTTTGAAAAAAAAATTTGACATGAATT TTTTCTCTTGTCATTTTATTAGAGCTATGATACATATAACTTTTGGTTAT GAGCTAGCGGTTTTCACAATTCATGTAACTTTATATGAACATCGTTTAGA TTAAAATTTGTGTGTTTTAAAATGCATTTTTTCTCTCAGTTATCTGTGGG AACATCTCATTTCTTTTCTCTTCAATAACTTTACTTGTTTGTGCGGACTT AATCATTTTTTTTTTACTAAATGGGTTATTCATCCTCGAAATAATTTCAT GATAAGTGTTTTTTTGTCTCTTGAGGCGATAAGCCTACTTTCTTTTTATA AAACACATGAAAAAATCGATCATTTTTTTATATGTGTGTTGTTCCATGTT TATCTCACAGAAAAATAAGAAATCAGAGATATGATGAGAAAAAGTTTGTC TAAAGTTTTAAATGTAGAGCAAACGTATTTGATTTAAAAATATAGTAAAT GTATTTTGAACTTCTTATTTCTTTTGATTCAAACTGATGATTTATTTGTT TATATTTTTAGAGCAAGCAACGACCAGCCATGTTAGATCTGCGTCAGCGA CCACTAGAACAACGAAAACCAAGTAACTTATTGATATCTCGACGACACTC AACGAATTCTACAAATTTGAATAGTTTGGCTTCACCATCATTCACCAAAA CAAACCCGCTCTCACCATCTTCGAGCAGTTTCTTTCCAATGCCATCGTCA CCTAAAGACCCCTTTTTGAACGGTTGTGGTTCAACCTTAGCATCTGCTCT CAACATGCGGGAACGTGCTCAAAGTGCAAGCTTCCAAGAAGAACTCGACG CACAACACCGTAAACGTAGCGGTACAAACTCAAGCCGTTACAAGACAGAA CTTTGTCGTCCATTCGAAGAAAATGGTACCTGTAAATATGGAGACAAGTG CCAATTTGCACATGGCTATCACGAACTTCGTGGCTTAAACCGTCACCCAA AATACAAGACCGAATTTTGTCGTACTTATCACACTATCGGATTCTGTCCA TACGGTCCGCGTTGTCACTTCATTCATAATGATGAGGAGAAACGTTTGGC TCAAGCAAGCACTGGCCGATCTGTTTCCATGTCCAGCATGGATTCAGCTC CCTCCTCTCCAGTCATTGACTTCGCTCCTTCACCATTCAGCAACACACCA CCTACCTCCCCTGGAGTTGGAGACGTCTTTGTTTTTGACGAACCAACTGC TCAACAAAACCTTCCATCCATGAAATCATCCCTGGCGAGTATGTCAACCA TTCCGGAGATATCATCTCACCAGTTTGTACCGAACCACATCACTCGTAGC ATCTCAGTTTCATCAGCTCTTCCCTCCAAAACACCTTCACCACCTAACCT CACTATTTCAAGCTTAATCACTGAAGGCACACGGATCGAATCCAGACCAA ACACTTTCCAACCCATTCAAATGAAATTGGACGAACGCAACATTTTGACT CCATCTGATTCGGGATCATCCAACCCACCCTCTCCTACCGACTCTTTGGA TGGCTCCAACCGACGTCGCTTGCCTGTTTTTGGACTCATGAAACAATAAA TGGTATGTTGACACTTGAGTGTGTGAGAGAAAAGAGGAATTTTCCCTCTG AAAACCAAAGTGTGAGAGCTAGATAAGAAAAAACTTAAATTATTACTATA TTATTAACTATAAATACTTTTTTTTTTGGAAATATGTGTCTATTTTGTCC GGTGTGTTATAACGAAAAAGCTTTTATGGTGATTGATACCCTTTTTACTT GAGGTCTCTTATTGAGTGAAGTGAGCTAAGGAGCGTTGTGAGCAAAAAGG AAAGTTATTTTTTCTATATTTTTTGTTTTTTTCTGGACTTTAAGGATTTA TAAAATGTATATTTTATCGAAAAATTTTTATATATATAGTCTTATTATTA TTATTATTATTATTACTATAGCTATGTTATTTAGTTTTCAAACTAGAAAA AAAGGTAAAAGCATTTTTTTTTGATTTGTTATATTGTATAAGATATGGTA TGACAATTTCTATAGCATTTTTTTCAAACTGTAAATATGATTTTCAGCAA ACACATCCAAATTTTTTTTGTTCTAGATTTTGTTTTATTTGTTCAAATTT TATTCTGCCTTCTCTCGATAGTCTGGAAGCCCTTCATTTGAGCTGGTTAT TTTTTCCTGGATTTCTCATTCTGTCTAAATTGGATTGACTGGACTTTTTT TCGAGAGTTGAAGGGTTTTCTTTGATCGTGTTTTTTAAAATCTTGGCGGA GTTTTCTCATAGAAATTTTTCAACGAGAGAACTTTTTTGGACAGAGTATT TTCTCTTCAGCCCAAACGTCTTATTTATATTTATATATATTATATAATTT TTTGTTTAAATTTTTGAAATTGGTCCCCTAGATTTAGAAAAAAGAAGGAA AAACAGGATCTCTATTCTGTCAAAGTTGGTTTTTTTATACTTATTGATAT TAGAGAGAACTTGTTTTTTATTTTAAGTTTATTATATATTTTAAATTAAT ATTATATAAACCCTTTTTGAAGGTTTAGGTTTCAGTGATAGTCAAAGTTT GTCTGTCTAGAAGCTTATTATCTTTAAAAAAAGGGCCAGGATAACTTAAG TTTTCCTCGTGTTCTACGCGTAATAACCAATTTATAATTTTTTTTATCTC CATCAAAAATCAAAAGTGGAAATGAGAAATAGCATTTTCTGATAAGGTAA TTGCCTTTCTTGAGATTTTTTCAAACTGATTTTGTGTTCTCATTGTTAAA GTGATAAAGCAATGTAAGGCATACTACAAGATTCAGGATAAAAAACCTGT TTGAACAAAATGGCTTAGCTTGTTTTTATAATTTATAAGAACTATTGTTT ATGTTTTGAAGTAGGATTTCGAGTAGGGTTTTGTCAAAGTTCAATCCATT CACGACACTAAGAGAGGGAGAGAGAGTTTCTCTTCTATGGCTCCTTTGAG TCTAGCAGATAACAAGTTTTTAATTACAAACAATTAAATAAAAAGCGGCG ATGAAAGGTTGCTTTATATAAATTGATAACGAGGAAACGCGAAACCTAAT TAAGCCGTTTTGTTTTCGACATGAGTTGAAAAGTGTTTATTCACCCACAA GGAAAGCATGTTTTCCCTACGTCAAAGAAAAAAAAGTCCCCCTGTATAAA TTTGCTTTATTTCCCTAATGTGTTCATGAAGTTAAATTAATGACACTTTT ATAATCAATTGATTTGGGAGAAATTTCGAAAATTCCTTATTTTAGTTGTA TAAACAATAGCTTTTCCCTTTTTATTGAAAATTATAATGGATTTTGGGAA CGATTTTTGAGGTTTCTTTTTTTTCGAAATAAAACGTGTTTTTGTTTGGG AGAATTTCGTTTTATTGTGAGCCTTGAAAACGTGCTTTCTTTGGTGTGAC GTCAAAAGCCTTGATCCCTCTATTGGATAACCTAATCTATTTTGCAGTTG AGAATTAATATTCATAAAAAGAATGAGAAAACCTTTTTGGAATCTGTAGT CTTTTCCTGATAAACACTTTATCAATAGAACCTCTTTTAAATTATATTGA TATTATTTTTGGAGAGATTAAAATTTATAAATTTTTGAAACATCGATATT CAGAAATGTCATGCGCGTTGTTTTTTTGTTTATTTAAAATATATTGTTTT ATTTATTTGACACAAACCCCCTCCCATNGATATTCAGAAATGTCATGCGC GCTGTTTTTTTGTTTATTTAAAATATATTGTTTTATTTATTTGACACAAA CCCCCTCCCATCATTGTAATATATTTTTTGTTGTTAAATTGCTTTAAGAA AAACTTTAATATTTTAAAATTTTTTGTGTAAAAGAGATTGATTTAATTTA AAAATAATACTTTTCCTTTACAATGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017117TCONS_00017117Clytia hemisphaericatranscript
TCONS_00017116TCONS_00017116Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017117-proteinTCONS_00017117-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000259supercontigsc0000259:173325..179550 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.6 2.82 0.92 0.74 88.62 65.88 53.09 63.01 29.6 51.18 30.26 49.1 127.72 124.34 140.37 172.35 95.08 103.32 85.77 91.98 91.47 95.77 30.1 41.9 56.99 61.15 156.62 122.19 120.68 115.9