XLOC_008716 (gene) - C. hemisphaerica

Overview
NameXLOC_008716
Unique NameXLOC_008716
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000214:368140..376773+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008716 ID=XLOC_008716|Name=XLOC_008716|organism=Clytia hemisphaerica|type=gene|length=8634bp|location=Sequence derived from alignment at sc0000214:368140..376773+ (Clytia hemisphaerica)
aaaacaatggGTGGGTCAAAGAAAAGAGAATCAAACAATAACAACAGAAA GAAACAACAATCATTAGCACACAAAGATCACAGAACAAACAAAGCATCAC ATCGCGCTGGGAGACATCAACATTTTGAAGAACATGCTAATTCATTACCA TCTGAAGAAGATTTGCTTCATAATAATGGTGATGAGCTTTCTAAGGGTGT TATAAGTCTTCTAAAATGATAAACTGTATAGACCTTTCAAGATTATGTTA CTGAGTGGGACATGGATTCATAATCACGTTATTTTCATAATCGCAAAGTC GCTTACCTCCTTTTCAAATTATCTCTTTGGTAATTATTTCCCAGAGAAGC TCATAAGAATAAAGTTAACCATCTTATAAAATAAGTAGAGGTCTATCATC TCTTTTTAGAAATAACACTCAATTTGTATCCCATtttagacactggcatg ttcatCCCTCCATTTTCAATCTCATTCCTGAAAATTTAGCATATTAGCAA TCCGAAACCACCATCCAGTCTCTTACCTTACGGGGGACGTTGTACGCCCC ACTGGTCTAATGAGACAAATTTGGGGTTTTCAGGCGATATGAAGAATGAC GTTTTCTGGATTTGAGCACGCCAAGTTATCATAGTATggtattttttctt aatttcagACGATGATGAATCTGCAGGACAATCCATCCCAATTCATCTTG CTATGTGGGTAAGAAAGCTTTTCCATATAATCAAGATAAAACGTCTTCTC TCCATTGTTCTTAATCACACTAAAGTGAGGGTGGGTGAACTAAGATCATT CaatcaccccctggaaattttagaataatttttagcccctaaaatgaAAA CCACTTCTTTGAACCCAATTTCAAAGATAAACCTAGTTGGGTCTTCTTGA GACAAATTTCGTGTTGATTTTTGGAGCAATCATTTTAGACAATTGAAATA GTAAtggaaaatgattgaaattcttcaaagaaaaaaaaatgttaaaattg gccaattttagtaccaggtaaaaaaaattctcaaatttttgtctGGATGC CATCTTTTTTAGGTATTTTACCAACCAGTTTTACTAAAAGGGTTTTTAAG TTTCATTCAAATGAACATTTATTGCAACGGGTTTGCAACAAATTATACAG GcatttagaaacttttcaagACACTTGTTAAATCAGAAACGCGTCAAAAA TTAGAAGGCGCGCAAAGGCGCGCAAAAAAGATTAAGGAGCACAAGGAGCG CCACTTTTTAGAAGGCGTGCAGGGCGTGCAATTCAACAGActcaattttt ggacctaccccggtgggctgtaggtcctataaattaacctctgttcgttc gtccgttcgtccgttcgtccgttcgtccgttcgttactagcttttctcgg gattggctcattagtttttcctaatttttggcacagagatgcaaaatggt aatgcccaaaatgtgacggagcccgattttcgaaaaaaattcatttccgg ccgaaaatgccggaaatcgccgtctttgcagattttcatcggactttttc cttatatttcgttgttttttcacacaaaaacattattgatagcaatgccc accatcaagcatggtttaattgtcaataaaagtgatttttgaagccggaa cttcctaaaaatcgccggaacagcctattttcgccggaaaaacggtattt cttgaatttctcgagctgtactttatatgttttcatgaaattttgcacac tgatgcaaaatgacaatacctaaaatgtgacggagcccgattttcgaaaa aaattcatttccggccgaaaatgccggaaatcgccgtctttgcagatttt catcggactttttccttatatttcgttgttttttcacacaaaaacattat tgatagcaatgcccaccatcaagcatggtttaattgtcaataaaagtgat ttttgaagccggaacttcctaaaaatcgccggaacagcctattttcgccg gaaaaacggtatttcttgaatttctcgagctgtactttatatgttttcat gaaattttgcacactgatgcaaaatgacaatacctaaaatgtgacggagc ccgattttcgaaaaaaattcatttccggccgaaaatgccggaaatcgccg tctttgcagattttcatcggactttttccttatatttcgttgttttttca cacaaaaacattattgatagcaatgcccaccatcaagcatggtttaattg tcaataaaagtgatttttgaagccggaacttcctaaaaatcgccggaaca gcctattttcgccggaaaaacggtatttcttgaatttctcgagctgtact ttatatgttttcatgaaattttgcacactgatgcaaaatgacaataccta aaatgtgacggagcccgattttcgaaaaaaattcatttccggccgaaaat gccggaaatcgccgtctttgcagattttcatcggactttttccttatatt tcgttgttttttcacacaaaaacattattgatagcaatgcccaccatcaa gcatggtttaattgtcaataaaagtgatttttgaagccggaacttcctaa aaatcgccggaacagcctattttcgccggaaaaacggtatttcttgaatt tctcgagctgtactttatatgttttcatgaaattttgcacactgatgcaa aatgacaatacctaaaatgtgacggagcccgattttcgaaaaaaattcat ttccggccgaaaatgccagaaatctgccggaaaaccgtttttttttacat tgtctcgaattttcatctttagctttttctgattttttgcacaaagatgc gtattagcaatgcctaaaacatggattagtccgatttttgagaaaaattt ttttccggttgaaaatgccggaaatcgccgtctttgcagattttcattat atgttttccttgtatttctatgttcttcGCATAAAagcattattgataac aatgctcaccatcaagcatgattcaattgtcaataaaacttttgcgacca gaactttctattaatttttccctacaacccttccctctccccccatcaac aatcaatgatgaatttattgcgttatgNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt tcgctaaacgatatattttctgactgatttttttctcctcgcattgctat ctaactttcatcatcaggtaggtccattcagcatctagcttgtttttgtT AAAActcttcatttcttttgtagttaagaaaacttgtttgactatgtttt attttgatttggttacACATCACAAGGCTTTTTATGTTTTACTCATTTCT TTTGTATAGGATATGGGTCATTGTGATCCTAAGAGATGTACAGGTCGTAA GCTTCAGCGGTATGGCTTGCTTACAGCTTTAAGATTGAACCAACGATTTA ATGGAATCGTCCTCAGTCCGATCGGTACAAAATACGTCTCAAAAGCTGAC CGACATCTAGTTCTTCAACATGGGTCAGCGGTTATTGATTGTTCTTGGGC TCAACTAGACCAAACTCCTTTCAACAAGATGAAATGCTCCAACCCCCGTC TTTTACCACACATGTTGGCAGCCAACCCGGTGAATTATGGGAAACCTTTC AAATTATCGTGTGTCGAGGCTTTCGCTGCTACTCTATACCTTGTTGGTAA GCACAACGtttttaaaatcattaaaatttcgCGAGCTTTGCGAATATGGG TGTCACCCACCAAAGATTTACTCATTTTGATATCAATTTCGCATCTGAGT TATTCTTCTTTACTATTAATCCTACCTTACCTTACACGGCTCACaactaa cttttgatctagttgtcTTTTTTCCATGGCACCTCACCCCTCCAAGGGAT tgaaaacactagatagagctactgtCTTTCCCAATCCACGACACATGAAG AAAAACAATTGTCATCTCGTAGACCGcagttcggtaccggcaatttcTTC AATCATAAGAAACTAGCATGTTGTGAAACAAGGAGGTGGGAAAACGGGCA TGATTAATCGAATTGCCAGCGTCGAACTATGATCGACTTATTAAAGATGA CGCATTATTTTACTTTAGCCAGAGACGAAGTAGCttctctcgggtaccta atagccggggggaggTCGctaattcatttttgaaaattttccacccagga cattcttattccaaccccctcccgcttattgatttttgggaaaatttttt tgaaagttccctcttttgccctaattctgctgtattaggctctttttcga aaaatttccacccaggtaataggacatttttattccaacccctcccCCTT ATTAAGTtgtgagattttttccaacctctCCCCTCGCTTTTCTACCCGAG AGTActtagtgttttatataagtcTTTGACTTGAGTCTGTGACTACAGGA TCATAATGCATATCTTATAGAGACATTCACTCTTACAATTCTTTTTGTGT TTAGGTTTCAAGGAGTATGGTGAACAGATCTTATCACGTTTCAAATGGGG TCTTCACTTTTTCGAACTTAACAGGTTAGTCTTCAGGACAGGTTAGGTGT TTACCGCAAGTTAGGCTATGAAAAGGATCTATTGTGTTTTTTTGTATCTT TCTTAAAACTATAGTTGCTTGTATAAGTTGTTGTTTGTCGATGTTGTTAG TTGATGTTGTGTTGCTTCCAAGGATAAACCAATGGGCGTGGTAAGCGTTT TTACGGAAGCGAAGTACCACGGTCAACCTCGTGTGTTGtctttttgatgt tgtttttgcAACGGTGTTTGCCGTAAATTGTTCTACATTCTTCTAAATTC GGCATTCTCGTTAAGATGAGCGATGAGAATGATGAAGATAACAAGGGTGG ATTACTGAGGAATCAAATATTATCGTGCTACCTTTAGCTTAAGAATAGTT CATTCCCTTATCTGtagattttaatttcattaatgtttaaaaatcgtcaa aataaaacttttcccGAGTGTGCCCGAGTGACAGCAAACcaatattttat gatttttagctATTCTTTCGATTATTTGAATGGGGTATACGACCGGCGGG AACCGTGAACCCCTGGTTTGAGTCGCTGACGCCCTGGCCACTCAGATGGT TGGTAGATGACATTTTTGCcccctaagtgccccccccgggtttgAGACAT ACTATAGTTTAGCATTTTACGCATTACTTAGAGAATTGTTGGACTTATAC GAAGGTTGTGATACAGAAGCGGAAGTGCGGCAAGTGGAAAGAGACTGGTT GGAAAAATGCGAAGCGGAATATCAAGCCGTCAAAAAAACTGGTAAGACAT CTGCAtccattttatttttcgaaGGCATCggtgatccaaaaaatatcagc aatctgattggttaaaaagagtacaatatatcttttatttaaggccggtc tccacttttgcGCGACatgaatgaaaacttttttcacgttttttttaagg ttATTGGTCGGTTGAGAAATttacgtaacggatgaaaaaagaagaacttc tttcaactttttttttgttggcgcgaaacttttttatgacgtaatctttt cttcaggcaaaaaaggttaagaaaaaactgtcgcccatttcgcgcgaaag tgaaTACCGGCCTTAagaagagtacaatatatcttgaattttaaatgtaa gaaaaaagtatgtcatgttacatatcgttggaaagcatttttcatGCCCG TTGAAGGACATCGtcctcaaatttttgctgacattagcaattacgtcatt tttcaaacaacctaccgcaataacttttattggcttcattTGCAGATACA GGTTGTAATGTTTTAAAGAACGGGTcatgaaaaatgctttcaaaCGGTAT AGaacatgacatactttggagaaGAAAAGATTTTAGCCTGGGAAcctgtt ctggtctgtaaaatagacGAACAGGTGCCAATCTTTTGGGTCTGAAATTT AAATCCATTTTGACCCTAAAACTACAATTGTGCAAAGTTTTATGCCTTCA ATAACTTTTGGCACATCTAGACTGCACTAAAAGCCCGACCTGAGAGTAAC AGAGGTTTCTCTACGAAATCTTCCATAGATATGATGAGCATCGATATGGA TTTAGAAGGAGGCTTCAATCCAAACAGAAGTGCAAACCTTCTCACAGGAA AAAGGTATTTCCACTATTCTATATTCCAAAAAGCCTCAATTTGCACAAAA TAAGCCTTAAACACGGCCTTCACTGAAAAAAGTACCTgtagtggagtctc tataactcgaacctaaACAAATTGGTCGAGTTATGGAGTTATGGAGTTAT GGAGTTGGGATTATATAAGACATTTCTGAATTTCGACATATGCTGTTTTC CTCATGAAGCACCAGAAAAGTTTTTAAAGCGTCAGTTTTCAGTACAAACT GGTGGTCTTagggtttttgaaaaaaatgggtATTAAAAGATCGCTTCTCG ATAGTTACCCAATTCGGCCATTTTATCAAAGAAAGTGAAATGTCACGGAA AAATACTTTAATTCTACTGTCTGATTACTGAAATGGAATTAGTTTTCGCA AGATTTATTCTCacgaaaatgggaaaaatttacgaaaacgcgaaattaaa tcccgcgaaaattaatcaaattaCTTACAGCTTCGCATTTTTTAACGAAT CAAAATTTTAGAGACTTTTACATATAGTAGGGGCCAACCTTTATAATCAG TAGCATCTTTATGGGACTCAACcgcatgtgattggttcgaaagGAGATAG GATTATGAAGCTTTTTTGAGATGGGGCCTTCGAATATATTCTAACGtaga aattttttagattttaaaatattaCTCACGAGCGAATATAATCTTTTTCA GAAACACCAGAGATTTTCCATCAAGCAgtgatgaaattgaaagtgaagaa gaagatTCAACGGAGAGCGGAGAAGAGGAAGAATACGAGACTGATCGATT CGGTAACACTGTCCGAAAGATAAATCCTGTCCGAGAAAATGATATATCAG TGAATGACGATAGCGTAATTCGCAAAGACATTTTATCGAAAGATTTAAAT TTGAATTATGGTATAGACACTGATAATACCGACCATAATATTCCGGACGA AATTAAAGATATTTCGGACAAAAATAAAGATGTTTCGGACATTGAATGTG TTATTTCGGACAGTCAAAAAGACGTCTTAACGACGGGTCAACTTGAGGTA TCATCTGTGCAAGAAAAGGTATCGAATATTGATCTTAATTCATCATCTAC TAATAAGacgtgagatttttttttttgatactttatgagggagaagattt tgatttttaaaaagtcactggtaattttctattttccttCTTATGAACTT CAAAAAGCTGGAAAAGAGCTTTTAAAAAGCATTCCATAGAGCTCTTTCAA ATAGAATCATATTTTATGGTGATGGAGGATGTGTTTTTAATGAACTACAC CCCTGTGACATCGCAAATATCACCCCATTGACAACGAGTTTTTCTAGATA TCCCTGTCCTGGACTATGAACTGTTGACCAAATTACAAGAATTCAACTGT CCTCTTGAATTGGAAATGAGTATTGAAAGTATATTTTATCGATTTGTCGT TTGCTTCTCGTTAAAAATCTTTTATACGCAACATATATTGCATCTTCATC GTTATTTACATACACACTGATGAAAGCtcaccaaaatattttctacCCAA GCtttcaataaataaatattaacaTTACATTTTTCCACTAATAGATATAT GATACCTAGATATTATCTACAGTTAAATGACTAAATTTTGTACAAAATAT ATCTTCAATAAAACTTTAATTCAGGTAATAAATAACCTTCCATATATTAA CCGGTTTGGAagttttttgaagctttcaCATTGCTATATGTGGTGATTTT CGACACATTTTTGAGTCTTTGCAGCTGATTCTTTCTCTTGCGTGTGTATT TGTATCATACGTACATGCAAACCTACTCATAGACGAGATGGAAATCGAGT GCAATACCAATTCCATTCCAACGAATGAATTCTAAATTTCTTTCTTCATC TCTCTGATTCCTCAAATCCGGTCTGAAGCTCCCTTCTTTAGCATGAAGCG CTTTAGGTCACTCCTGCCCAAAACACAGTCTGATTGCCAAAACTTTCGCT CATTCAACATTTTGACGACCATGCGCCTGCGCAATCTTCGATTGAATTGA ACGTTGAGGTGCAAGGTTATGAGAATCTGTTTATTGATCCGTCcttcaat aaaacttttgaaagtgATCAAGATGTCGTTTCTCCCAACATACCTTCTTT CTACTTATTCACTACGTCAACATTTGAGTTTTCCGTTGTTTATTTCAGGT ACAGTTCCGTCTTGTGTGTGCTCCTTCCGCTTTTCAGATGATCCGCAATC TCGGGTGAGCTGAGTATGAGAAAATGATAACTTGATTAATCGATGTCCTT TCTAAGAAAATACTCTTGCCctggtaaatatttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015621TCONS_00015621Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015621-proteinTCONS_00015621-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000214supercontigsc0000214:368140..376773 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.19 23.4 18.48 18.28 7.37 5.33 7.34 8.31 7.38 6.2 8.28 7.43 11.02 10.43 11.17 11.19 9.23 12.88 8.31 7.11 8.07 7.67 17.51 14.68 8.97 9.48 5.8 7.71 8.15 9.49