XLOC_008651 (gene) - C. hemisphaerica

Overview


Name	XLOC_008651
Unique Name	XLOC_008651
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000212:54778..70355+

gene from alignment at sc0000212:54778..70355+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_008651 ID=XLOC_008651|Name=XLOC_008651|organism=Clytia hemisphaerica|type=gene|length=15578bp|location=Sequence derived from alignment at sc0000212:54778..70355+ (Clytia hemisphaerica)
gtcccaatcttcagtagaacaggtcatatttttccagctggtcccaatct
tcagtagaacagaccatatttttccagctGGTCcaaatcttcagtagaac
agaccacttttttccagcagacttttttctttagttcgctaagaTAAGAA
Cagccgccatatccagctggaacgtgccttcagaacagatattttgaagt
cccccttcggtggatgctttcgtaaGAAGGCTTTCTGATGCCACCACGTT
GCTTTTGGTAACTAGAATAGAATTTAATATACCTGTATGAATCCCTTTTT
TCAAACACACTGTCAAATTTACTGTTAGAAATTCTAGGAAAAAAGTCGAA
TATTCGAACGTGGACCACGCAGCACGTGATGTCGGCATGTTCGTTTTCTA
AATGCTCGCATTTGAGTGAAATGTAATCCGTCAAGCATAGGAATGAAAAA
AAAGCTGTCCTTTTTTCGGTTTTAGTTCTGTGAACTTTCGAACCCTCTCA
ACATCTTAACGGATGAGAAAGTTTTAACATCTGCGAATCTTGATACATCG
TAGCTCATCAAACCTTAGAGCCTATCTACATCTTAAAGTTTAGTGTACGC
GGGGCTTTAAGAGCATGCGCCAAGAAagtcaaaatcaaagaaaattttgg
agCCGAAAAAGAAAGCAGACAGCACAGCAGACAGGCAGAGAAGAAGTTCT
GAATCAGGATCTTTCCAAGAAGAATGGCTGACAGAAAACGAAGATTAGAT
GTTGATGGAGCATCATCCAGCTACAAAAAGATGAAAGAGCAAATCCTTCA
AACCACCCCAAAAACAAGTAGCAGGTATTatcttttcttttaatttttca
gggaGAGGGGTAtaagtttgttaaaaaaattgccgtacGAACAAGGGGAA
CctcttcatacaaaatttacgtgaaacacatatttggacttcATACCCAA
TATTGCATGCAAGCACTTAcggtgagattgggtaacttgcatcagtggag
gctaaaatgcatagccctcaaatgaatgacctgtcttgTNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNcctttcgtccaaagcaaaagacttgcttttc
tcgccgccatcttgttttagaatgagaattattttcagttCCAGTTCCCA
CGGTCTTTAGTTCATCCagtcagatcgcgcgatttcacttttgctttctc
tagtccaataagactgcgggatttgagtcatttgacatctctattgaaaa
acccgcgcagaataaaatagaaatacagggggtcacactactggctacag
gcagtgtagctggaacctcaatattccaggattagaaaaagctatacctg
ttatcttttttctttaaaccattttaaagaatcaacaagccatcaacatt
gataaattacacacatttcctcagaaacttttaaaattatctgccattat
gactttcttgaaagccgttccgaaattaaccaatcgggttatgtgtcaga
attcctatgggaattcttttccgagatttgtaaaatagctaagtcggcaa
aaaaacttttcctgggggtttgaggggaaaacagaactgctatcatttgt
tttttatttaaccatatatttaaatttgcgctcaaaaatatttaaataaa
taagttaacaatattcaacacactatttgtatctctcagaaaataaacac
ttacagaacgacatagtttatcatttggaatacccccgtatttggaccat
tctatcgtgggtgcaaaatagggcggaaactaagtagcaccctcagtgga
AAATTACCGCCTcgtctttattcgcccgcgtgAGAAtacgagctaatcat
ttttttctcgagcgctcaaggggaaaaggaaagtgatcaatattctttga
aggaaaaacgtcagaaacaaacccaatgaccaaaagatgtattttgttgt
tgacaatcaatcctgtgaagatgaaaaaaaatttttcggaacgttaaaaa
actctaatttcgatcttttcttaaggtaaagaggttgtgacatttgggtt
agcgaggcaaaaattgctaaaaagctggtaaaatcgtaatcctcaaaaat
cgaagttccagcctcaaaaaaattaaggccaatatgtttggtttttctga
aggacaaaaggtatgggaagctttactgaaggagggataaggctgggact
atctatttaaaagatatggacaaaaaaaggcacttttttgggtgataatt
gagattttacttagaaactttaattcttttacccccgtctcggccccccc
tgatatgagcaagggaaccatgttggccacccctgctgaaaatttcagat
caaaacaaacaaggagttgattcctgtaactcgatgaaaattggaaaaag
ctgcagtttttgactgtttctgatcctaaagtgctatttatTGGTAAatg
ctatgcaatttatgtttggatttctagaaagcttacccattcattgtcaa
tatattttttatttgaaagtaatctcttcatggaataaaaagatatatag
tcaaatcttgtagggtcatttttcaaaaaaatttctccgaaataaatttt
cgcatttcgccattttaccctacgcaaacgcacgtgagtcaggccacgtg
cgtttggttttggaaagcgaaacacgaacgcgaactaccaatgtcaaaac
ttttcaatattatctccagaactaacagattttttgaaattctgtaaaat
gGTCCAAGTTCCTGagtagttttactatgttctgtgaaaaattCATAACC
ATCAGagaaatactcgttcatctatttaagattgaagacaaaaatttccg
aagaaaaataaacctttagcaaaaaaaatgcttttttaaacacttttttc
caccgaaaaacttttatagacttatcttccccaaacattgaagaagcctc
tactaattcaagtaaatgagataagataagataaaaccttaaaatcaacc
agaatttacaacctttcgtccaaacagtgtggctcgaatccttcagatcc
ttggttagaaaaagctatacctgtttacttttttcttgccagtttcaaca
agccatcaaccaacaaaattacaACTAACATCTGAAAATTCACACGGCCT
TTCCACAGtagacacttctaaattatctgccattatgaagatgttccaaa
attaaccaatcgggtttacaatcggaattcctctgggagttagcgagttg
ggaaatgtaaagttacgtaataagaaaatactgtttttccgggggttaaa
catataaaagaaaattgaaacggtttatttttttcttcattaatatattt
aagtttccgttatcaaaattctagaaatgctaatttgtagaccatattac
aaaatgtttatatatttcgcaaaataaacacttacaaagatattacttac
tatttttacccccgctttTTAAACATCGTCTTCTGTGGGCGTGATATCAG
GCAAAGACAAAACGCCCTCATTGTAAGATTCTCGGGTCATCTTattgttt
gtttcttttgtcAAGTCTGTTGGTCCTATTGTTCATGCTAAATCCATACA
CGATGACGTCAACGTTTGGcggcatacctgaaaataaaaacataaagatt
attattatttttgcataaattaatgtttttttatgcaatttatgtttgga
tttctagaaagcttacccatccATTGTCANCGCTACCTTATACgttatta
taaaattatacaaaacgaaaGCGAGTCTAGGCCGCCCGCCTAGAGAGCGC
AagccctaatattttttctctcgcggcCTTCAGggaaaaacgaaagtgat
caatattcttCAGAAGGAAGAACTTGCCAAAAAAACCCTAGACAAAAAGA
TGATTTTCgaggttgggaatggatcctgcgaagatgaaaaaattctgact
agggttttttttggcaaacccaaaaactctaatttttttcttccctcaag
ctaaaaaggttacgggttttgggcaattgaggcaaaaatcagcaaaaagc
tggtgttttccgtaaatctgagaatcgcgataagatcctcactgccaaag
caaaagacttgcttttctcgccgccatcttgttttagaatgagaattatt
tttgtGTCAGTTCACATGGAAATTTTtacatccaatcagatcgcgcgatt
tcactttcgctttctctagtccaataagactgcaggatttgagtcatgtg
acatctctattgaaaaacttGTGCGAAAtacaatagaaatacagggggtc
acactactggctacaggaactgaaagcaaacaattaagtccaatattttt
ggtttttctgaaggacaaaaggtataggaagctttactgaaggagggata
aggctgggactatctatttaaaagatacagacaaaaaaggcacttttttg
ggtgataattaagttttacttagaaactttaattctcttacccccgtctc
gggcccCCCCTGATATNattttacttagaaactttaattctcttacccac
GTCCTACCCCCcttgatatgagcaagggaaccatgttggccacttctact
gaaaatttcagatcaaaacaaacaaggaattaattcctgtaactcgatga
aaattggaaaaagctggtttttgactgtttctgatcctaaagtgctattt
tttggtaaaagctatgtaATTTaggtttggatttctagaaagcttaccca
tccattgtcaatatattttttataaagtaattgcttcatggaataaaaag
atatagtcaaatcttgtaaggtcatttttttaaattttgccaaaatcgat
tttcacattttgcaattttaccCTACACAAACGCACAtgaggctagctct
aaagctctaaaacagcatctaataacatgaaaaccagaatatgattcttc
aatgggaatcaaggGGCCATCAATaaatgaaaatcctttttttaacGGTC
TCAAGCCGTTAAGACTCtgatatgtcagatctaacaaaattaataatagC
ACcatgtcatcattgacaataaaacaaaggattttctgtcaagagctttg
taaacattccaacaactttcatcgaaatgatctgtcactCCCACTGCAAC
ACTGCtagagtctaccatttttagtgcGGTCAGAGGAgaagtccaaatat
gtgtttcccataatttttgtatgaagagttcaGTCTATACAGTCTTGCAA
TAGTGGATGTTCCTAAAAAGAACTGTCAGGGTTACTTTATTCATCAGtca
gtctaagcttaaactcTTATATCAGGatttagaaactaggctagtcttac
gtcttttatctttccctttacatTTACATCTTTACATCTTCATTCATTTA
ACTGCATTTAAGAGCAAACAGATTTAtagaaaattgttaaaataaaattg
ttttttggggttggtaaagttcacctttgcagatttgagagtttagaagt
acattttgacagacttgatccttaaaaatggtagatcaggaggtaaagat
cttgatgaaagtttgtactatccccatgaaacttttcaaaaaccaaGATT
TCATTGTCTTAGAgggctcattttctgttcaatcttgagcaaaaattgtt
gttttgagcagcattgtcaagatttttaggattttagagtTAAGACAGAC
TTTGATAGTACAGTCTAATTGTGTAAAAATTGTGCACAAAGGCGTACAAG
CATTAGACTTTGCACAATTGaagtttaggggtcaaaaatggatttaaatc
tcagacccaaaaaattggcacctgtttgtgtattttacagaccagaacag
gTTTCCAGGctaaattaaatttcttttactccaaagtatgtcatgttaca
taccgttggaaagcatttttcatgctcgtttagaaaaacattacaaccta
tatctgaaaatgaagccaaaaaaagttattaaggaaaggctttttaaaaa
ttgcagaaaaatgacgtaattgctgatgtcagcaaaaattcAAGGACCAC
CCAAAAATGTTTATTTCTATCAAATTAAATAGagtcaaaagttacagcca
ttatttgtctcagctgcaaactatttcgagacagactttattataggatg
ctttcacaaaatcaagaatcaagtttcaatgggtactcattttgggcaaa
aatttcagccaaaaatgtacttttaagtcaatttttcaaaattaaggtGG
TCAGGGGAGTTAGAAGCTGTCTTTGAGTGAAATTTCAGCCTCTTTAAATT
TTCCTGGAAACCTTTCTGGAATGTGATgaggaatcatgattttcagataa
aatttactttctaactgccaattactggcggcaatagaatgacctcagct
ctagtaaaaaaaattgaaaaaaagcctttttggcccataaaagcacattt
gacaacttttttcacctagtttcattgtttttatacaaaagattcatcat
agcccttatattataaaaattcagtgacctagacccctttgaagtttgcc
aatgggccaaagggccaaaatatcccaaattttagtcatttttcgagTGA
TGTTAAGGATTTGGGATTTTACTAAGTTCATTGCACTTAAAAACATAtcc
caaaatccaaaaaaatctaagtttcaaactattggaactGCCCCAGACTG
CCCCAAACTgccccattcttaaaaaaactggctcttaataATTATGGTAT
CGAGTCATTGTATAATAAAAGGGAAATCGTGAAATTTTTATCACATTATT
AGAAAAATACAATTagtaaaagaaatatttttcaatagttTTAGTGGACA
ATAGATATCCAATCAgtatctttataaaaacaatattatttattttcttt
cagtttctCTTCCATACCTGCAAAGATAGTGTCCGGATACAAAGAAAATC
TTCCACCACTAAATCCTATGAATCAAAAGCCATGGAGTGAACGTTTTAGA
ACCATCCTGAAAAAGCGCCTGAACTTACCAGTATGGGAGTATCGAGATGA
GTTCATCAAGACATGCAGTGAAAATCAATGCGTTGTTTTGGTGGGAGAAA
CTGGTTCAGGCAAAACTACACAGGTAAGACTTAAATGATGTAATAatagt
tttttgaattttgttgttGCTGTCGTTTTCTGTCCAAGCAGTTTGATTAG
TGACCTGAAGTTCAGGATGCAGTGTCAGGGAAGTTGAAAAAGAGGCTCCC
TGTCTCAAATATCCACacaatttgtcaaaatttgaagaatctgAAATTCT
ATGCTGtgaaaaaaccagtttttcatCTCAGCAGGGGGGATATcgagtca
gtgtactggcccatagctggtggggtggtgtattttttaggttaaattga
gttagtacactgtactaaaagggtggtcctctgtctctgagaaaaataca
atgaaaaagttagtacactgtactaaaaagggtggtgttctgaattgata
cacactgagaagttagtacattgtactaaaaagggtggtgttcTGAATTG
ATACACACTGAGAAGTTAGTACATTGTACTAATTTCAGTGGTAAAAATAC
ACAGACCCAGAGAATGCCCATGTATATTTGCCCTAATTTGCCAGGTCCAA
GCTGGAGACCTTCAAATCAAGGCTGaagctaaagtctgtctcgaaataat
ttgcagctggagaaataaatagctgtaacttttgatagaattcgaatcac
gttacggttttgtgctcgttaaaaagatattcgtgagtggaatattatca
agtaaaaaaattgagaaaaaaaaggaaaatgaaaatgaaaaaaagaagaa
gaaaaaaattaacttcttgtagaaatgtggtataattatcattttcacag
gagtgactcttcaatctttattcatcatcactgtgaaaaaattttNNNNN
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NNNNNNNNNNNNNNNttacttgataatattccactcacaaatatcttttt
aacgagcacaaaaccgcaacttgattcgaattctatcaaaagtcacagcc
atttttttctccagctgcaaattatttcgagacagactttacactgattt
tctcccaatgtttcctgtttacttgattggatttgtttcagAGTCGCAGC
ATgcacaagtggagaccggccttaagtccaatcttttttacattttcttt
aaaactttatctacattatggcaacaaaagaatttgaatgtGTAAACGTT
CAAATCGAACCTTTCAAGTCACTTActtttctatttcaaaaaagaaaaac
tgctaCAGCTTGCCAGACAACCAGAAATCAAGTCATAAAAGGGAAATAAC
TCAAAGTTGGTTTTGAGTATTTTGACTTGCTAATTTCACTGTATTCGAAt
gactttgtctgcttcattgtTTCAGTGTTTGTACTACAAGGATTCAGATA
TTTtaaatattcaaatctttccttttatataatttggtgcttttcttagc
aaaaatgcttcaaaaccttTGTATATGGTGGTAATTAAACTTATCTGGCC
AAGGAGAAATTAAaacagtgcactataagggaTGGTTTCTAAACTTATCT
GATCTAAAAAACAGCTAGTatagtgtactaaaagggtggtatcaaaaATC
CGGTCATGGAGAAAAGTCAGTACAGTGTgctaaaagggtggtgtcaaagc
tcCGGCCGTGGAAGGatgttagtacagtgtactaaaagggtggtatcaaa
aATCTGGTCACGGAGATGAGTCAGTACAGTGTgctaaaagggtggtgtca
aagctcCGGCCGTGGAAggaagttagtacagtgtactaaaagggtggtat
caaaaATTCGGTCGTGGAGAAAcgtcagtacagtgtactaaaagggtggt
gtcaaagccccgaccgtggaagaaagttagtacagtgtactaaagaGGGT
GGTggtctatttttttttcaaaaatcaagttagtaccctatggtccagta
cactgacttggtacccccccccctcctgaTCTCAGATGTTTTGTTCACTC
ACACTAAAGGGGCACTAATAACACTGCAATAGTAGTATTGATCAATTTAA
TAGTTGTTATATTTCTGACTTGAAATTATTTTCCTGAATActgaaaattt
gtacaaaaaattttcggcaaaataaagtaaaaactttatttttaccCTTA
TTTTTATCCtgattaaatttaaaagaaaaaaagaaaattgttaaaacTTT
CCAAATACGCAAAAAAGTAGTACCTAATTTACCAACTACAACCCAGGATT
TTTGATTCGACAGCCATGCCAAGTGCTAAAAGGTTCTGGTGTCTTAATGT
ACGACTTATTATTTCTGAACGAGAGTGGAACAATCTTTGCAATCTTTTGA
TTAAAACCTGTTGTTTTTACTTCAGATTCCACAATGGTGCTTAGATTTAG
TAATGTTGGGAAAACGTAAGCACGTCTGTTGTACGCAACCACGTCGAGTA
GCTGCAATGAGTGTTGCTCAACGTGTTGCTGATGAAATGGACTGTGTGAT
TGGTCAGGAAGTTGGATATTCTATTCGTTTCGAAGACTGCTCCAGCTCAA
GAACTGCAATGAAGTAATACTTTTGTTTTTACAGTTTAACTTTTCAATTA
GGTAGCACTTTCAAACTTAACTTTTAAGTATTCAGtattcaattataatt
tttctcTTGATTGGTAGAAAGTTGATCTTCATTCTGTACTTCCAGCCCCT
TcctttttatagaaaattttaGGGTGTAACTTTCTTCActttctaggggg
gggggctgatgCTCAGAGAAAGTTGATCTTTACTATGGTTGACAGTCGAG
TGAGTTGAAACAATCTAACAAGTAATAAAATACTGGTTTCCAAAACCAGT
GCTTTATTTCTTGTTAGATTGTTTCAACTCACTCGTGCAACCAagcttca
ttttcttttattaaGCTTTCTTTCCTACTAATTCTgcgattttaattttt
cagataCATGACAGACGGTATGTTGCTAAGAGAAGCAATGACAGATCCTT
TGCTAGATAGATATGGTGTCATCTTACTCGATGAAGCTCACGAACGTACC
CTTGCTACTGATATCTTGATGGGTCTTATTAAAGAGGTATAAGTTGTCAA
GTTTTTGTGAATCAATCTTGAGTCCATTCTATTCATTCTGTCATCTTGTT
CTTCTGCTATCTCGTTATAGTTCAAACAATAAACAAAGAGCTTGTTATTT
ATTTGAAGGCTGATTAACTCAAATGATATtcaattcacaaaatttaaatT
GCAATACTAATCTTTTGTAGGTTGTTAAGCAACGTCCTGATTTAAAGGTT
ATTATTATGTCTGCCACTCTTGATGctggtaaatttcaaaattattttgg
tgATGCACCTCTTTTGACTATCCCTGGCCGTACCCATCCTGTAGAGATCT
TCTACACTCCAGAACCAGAACGTGACTACTTGGAAGCTGCTATTCGTACT
GTCGTTCAAATTCACTTATGTGAAGAAGTCGAGGGCGATCTCCTCATGTT
CTTGACTGGGCAAGAAGAAATAGACGAAGCATGTAAAAGAATTAAACGTG
AGGTCGACAATCTAGGACCAGAAGTCGGCGACATGAAGATCATTCCACTC
TACTCTACCCTTCCACCGCAATTGCAACAGCGTATTTTTGAGGCTGCGCC
ACCCAAGAAAGCCAATGGCGCTCTTGGTCGTAAAATTGTTGTATCAACAA
ATATCGCTGAAACATCTCTGACTATTGACGGTGTCGTTTTTGTCATTGAT
CCTGGATTCTCGAAACAAAAGGTTTGTGCACTTACTcgggggaatttttt
tttcagaaaataggaaaagggggggttttcaaaaatctagggGGGGGGGN
TAAATATTCAGTATTCAACTATAATTTTTCTCTTGATTGGTAGAAAGTTG
ATCTTCATTctgtacttccagccccctccttttTATAGAAAATGGGGGGG
GCTGATGCTCAGAGAAAGTTGATCTTTACTATGGTTGACAGTCGAGTGAG
TTGAAACAATCTAACAAGTAATAAAATACTGGTTTCCAAAACCAGTGCTT
TATTTCTTGTTAGATTGTTTCAACTCACTCGTGAAAGCAagcttcatttt
cttttattaaGCTTTCTTTCCTACTAATTCTgcgattttaatttttcaga
taCATGACAGACGGTATGTTGCTAAGAGAAGCAATGACAGATCCTTTGCT
AGATAGATATGGTGTCATCTTACTCGATGAAGCTCACGAACGTACCCTTG
CTACTGATATCTTGATGGGTCTTATTAAAGAGGTATAAGTTGTCAAGTTT
TTGTGAATCAATCTTGAATCCATTCTATTCATTCTGTCATCTTGTTCTTC
TGCTATCTCGTTATAGTTCAAACAATAAACAAAGAGCTTGTTATTTTAAA
GGCTGATTAACTCAAATAATATtcaattcacaaaatttatatTGCAATAC
TAATCTTTTGTAGGTTGTTAAGCAACGTCCTGATTTAAAGGTTATTATTA
TGTCTGCCACTCTTGATGCTGGTAAATTTCAANCTGACGCCATTTTCAGA
TATACCGTTAGATTTTAAGTTTCACATTTAGGAACTTCGGTAGAATCAGA
GGATAATGATttttaatcattgtttattGCCACAACACAActtgttttat
attttgaaaggaTAAAAACCTTTCATAGTTGGCAGTTATCCCCGAAATAA
AACCAAAATGATACATTGTTCTACCTGGAAACCTCGGAATAATTAAATCA
ACCTTAAGTCTCATGGAAAAAGAGTTATTCATAATTTGCTGCTTTTAGGT
ATACAACCCCAGGATTCGTGTTGAATCATTATTGGTATCAGCTATTTCAA
AAGCTAGTGCTCAACAAAGAGCAGGTCGTGCTGGTCGTACCAGACCTGGT
AAATGTTTCAGGTGGGTGACTTTTTTTT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00015494	TCONS_00015494	Clytia hemisphaerica	transcript
TCONS_00015495	TCONS_00015495	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00015495-protein	TCONS_00015495-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000212	supercontig	sc0000212:54778..70355 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
97.86	99.82	111.2	102.76	103.92	84.85	79.45	84.47	78.04	72.01	100.4	93.59	91.48	94.87	80.35	86.75	75.29	72	36.7	43.13	75.53	76.46	53.81	61.4	109.49	118.31	48.61	55.27	39.75	40.43

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XLOC_008651 (gene) - C. hemisphaerica