TCONS_00015495 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015495
Unique NameTCONS_00015495
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1996

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015495 ID=TCONS_00015495|Name=TCONS_00015495|organism=Clytia hemisphaerica|type=transcript|length=1996bp
gtcccaatcttcagtagaacaggtcatatttttccagctggtcccaatct
tcagtagaacagaccatatttttccagctGGTCcaaatcttcagtagaac
agaccacttttttccagcagacttttttctttagttcgctaagaTAAGAA
Cagccgccatatccagctggaacgtgccttcagaacagatattttgaagt
cccccttcggtggatgctttcgtaaGAAGGCTTTCTGATGCCACCACGTT
GCTTTTGGTAACTAGAATAGAATTTAATATACCTGTATGAATCCCTTTTT
TCAAACACACTGTCAAATTTACTGTTAGAAATTCTAGGAAAAAAGTCGAA
TATTCGAACGTGGACCACGCAGCACGTGATGTCGGCATGTTCGTTTTCTA
AATGCTCGCATTTGAGTGAAATGTAATCCGTCAAGCATAGGAATGAAAAA
AAAGCTGTCCTTTTTTCGGTTTTAGTTCTGTGAACTTTCGAACCCTCTCA
ACATCTTAACGGATGAGAAAGTTTTAACATCTGCGAATCTTGATACATCG
TAGCTCATCAAACCTTAGAGCCTATCTACATCTTAAAGTTTAGTGTACGC
GGGGCTTTAAGAGCATGCGCCAAGAAagtcaaaatcaaagaaaattttgg
agCCGAAAAAGAAAGCAGACAGCACAGCAGACAGGCAGAGAAGAAGTTCT
GAATCAGGATCTTTCCAAGAAGAATGGCTGACAGAAAACGAAGATTAGAT
GTTGATGGAGCATCATCCAGCTACAAAAAGATGAAAGAGCAAATCCTTCA
AACCACCCCAAAAACAAGTAGCAGtttctCTTCCATACCTGCAAAGATAG
TGTCCGGATACAAAGAAAATCTTCCACCACTAAATCCTATGAATCAAAAG
CCATGGAGTGAACGTTTTAGAACCATCCTGAAAAAGCGCCTGAACTTACC
AGTATGGGAGTATCGAGATGAGTTCATCAAGACATGCAGTGAAAATCAAT
GCGTTGTTTTGGTGGGAGAAACTGGTTCAGGCAAAACTACACAGATTCCA
CAATGGTGCTTAGATTTAGTAATGTTGGGAAAACGTAAGCACGTCTGTTG
TACGCAACCACGTCGAGTAGCTGCAATGAGTGTTGCTCAACGTGTTGCTG
ATGAAATGGACTGTGTGATTGGTCAGGAAGTTGGATATTCTATTCGTTTC
GAAGACTGCTCCAGCTCAAGAACTGCAATGAAataCATGACAGACGGTAT
GTTGCTAAGAGAAGCAATGACAGATCCTTTGCTAGATAGATATGGTGTCA
TCTTACTCGATGAAGCTCACGAACGTACCCTTGCTACTGATATCTTGATG
GGTCTTATTAAAGAGGTTGTTAAGCAACGTCCTGATTTAAAGGTTATTAT
TATGTCTGCCACTCTTGATGctggtaaatttcaaaattattttggtgATG
CACCTCTTTTGACTATCCCTGGCCGTACCCATCCTGTAGAGATCTTCTAC
ACTCCAGAACCAGAACGTGACTACTTGGAAGCTGCTATTCGTACTGTCGT
TCAAATTCACTTATGTGAAGAAGTCGAGGGCGATCTCCTCATGTTCTTGA
CTGGGCAAGAAGAAATAGACGAAGCATGTAAAAGAATTAAACGTGAGGTC
GACAATCTAGGACCAGAAGTCGGCGACATGAAGATCATTCCACTCTACTC
TACCCTTCCACCGCAATTGCAACAGCGTATTTTTGAGGCTGCGCCACCCA
AGAAAGCCAATGGCGCTCTTGGTCGTAAAATTGTTGTATCAACAAATATC
GCTGAAACATCTCTGACTATTGACGGTGTCGTTTTTGTCATTGATCCTGG
ATTCTCGAAACAAAAGGTATACAACCCCAGGATTCGTGTTGAATCATTAT
TGGTATCAGCTATTTCAAAAGCTAGTGCTCAACAAAGAGCAGGTCGTGCT
GGTCGTACCAGACCTGGTAAATGTTTCAGGTGGGTGACTTTTTTTT
Run BLAST on NCBI

protein sequence of TCONS_00015495-protein

>TCONS_00015495-protein ID=TCONS_00015495-protein|Name=TCONS_00015495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=424bp
MADRKRRLDVDGASSSYKKMKEQILQTTPKTSSSFSSIPAKIVSGYKENL
PPLNPMNQKPWSERFRTILKKRLNLPVWEYRDEFIKTCSENQCVVLVGET
GSGKTTQIPQWCLDLVMLGKRKHVCCTQPRRVAAMSVAQRVADEMDCVIG
QEVGYSIRFEDCSSSRTAMKYMTDGMLLREAMTDPLLDRYGVILLDEAHE
RTLATDILMGLIKEVVKQRPDLKVIIMSATLDAGKFQNYFGDAPLLTIPG
RTHPVEIFYTPEPERDYLEAAIRTVVQIHLCEEVEGDLLMFLTGQEEIDE
ACKRIKREVDNLGPEVGDMKIIPLYSTLPPQLQQRIFEAAPPKKANGALG
RKIVVSTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVSAISKA
SAQQRAGRAGRTRPGKCFRWVTFF
Run BLAST on NCBI

transcript from alignment at sc0000212:54778..70355+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015495 ID=TCONS_00015495|Name=TCONS_00015495|organism=Clytia hemisphaerica|type=transcript|length=15578bp|location=Sequence derived from alignment at sc0000212:54778..70355+ (Clytia hemisphaerica)
gtcccaatcttcagtagaacaggtcatatttttccagctggtcccaatct
tcagtagaacagaccatatttttccagctGGTCcaaatcttcagtagaac
agaccacttttttccagcagacttttttctttagttcgctaagaTAAGAA
Cagccgccatatccagctggaacgtgccttcagaacagatattttgaagt
cccccttcggtggatgctttcgtaaGAAGGCTTTCTGATGCCACCACGTT
GCTTTTGGTAACTAGAATAGAATTTAATATACCTGTATGAATCCCTTTTT
TCAAACACACTGTCAAATTTACTGTTAGAAATTCTAGGAAAAAAGTCGAA
TATTCGAACGTGGACCACGCAGCACGTGATGTCGGCATGTTCGTTTTCTA
AATGCTCGCATTTGAGTGAAATGTAATCCGTCAAGCATAGGAATGAAAAA
AAAGCTGTCCTTTTTTCGGTTTTAGTTCTGTGAACTTTCGAACCCTCTCA
ACATCTTAACGGATGAGAAAGTTTTAACATCTGCGAATCTTGATACATCG
TAGCTCATCAAACCTTAGAGCCTATCTACATCTTAAAGTTTAGTGTACGC
GGGGCTTTAAGAGCATGCGCCAAGAAagtcaaaatcaaagaaaattttgg
agCCGAAAAAGAAAGCAGACAGCACAGCAGACAGGCAGAGAAGAAGTTCT
GAATCAGGATCTTTCCAAGAAGAATGGCTGACAGAAAACGAAGATTAGAT
GTTGATGGAGCATCATCCAGCTACAAAAAGATGAAAGAGCAAATCCTTCA
AACCACCCCAAAAACAAGTAGCAGGTATTatcttttcttttaatttttca
gggaGAGGGGTAtaagtttgttaaaaaaattgccgtacGAACAAGGGGAA
CctcttcatacaaaatttacgtgaaacacatatttggacttcATACCCAA
TATTGCATGCAAGCACTTAcggtgagattgggtaacttgcatcagtggag
gctaaaatgcatagccctcaaatgaatgacctgtcttgTNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNcctttcgtccaaagcaaaagacttgcttttc
tcgccgccatcttgttttagaatgagaattattttcagttCCAGTTCCCA
CGGTCTTTAGTTCATCCagtcagatcgcgcgatttcacttttgctttctc
tagtccaataagactgcgggatttgagtcatttgacatctctattgaaaa
acccgcgcagaataaaatagaaatacagggggtcacactactggctacag
gcagtgtagctggaacctcaatattccaggattagaaaaagctatacctg
ttatcttttttctttaaaccattttaaagaatcaacaagccatcaacatt
gataaattacacacatttcctcagaaacttttaaaattatctgccattat
gactttcttgaaagccgttccgaaattaaccaatcgggttatgtgtcaga
attcctatgggaattcttttccgagatttgtaaaatagctaagtcggcaa
aaaaacttttcctgggggtttgaggggaaaacagaactgctatcatttgt
tttttatttaaccatatatttaaatttgcgctcaaaaatatttaaataaa
taagttaacaatattcaacacactatttgtatctctcagaaaataaacac
ttacagaacgacatagtttatcatttggaatacccccgtatttggaccat
tctatcgtgggtgcaaaatagggcggaaactaagtagcaccctcagtgga
AAATTACCGCCTcgtctttattcgcccgcgtgAGAAtacgagctaatcat
ttttttctcgagcgctcaaggggaaaaggaaagtgatcaatattctttga
aggaaaaacgtcagaaacaaacccaatgaccaaaagatgtattttgttgt
tgacaatcaatcctgtgaagatgaaaaaaaatttttcggaacgttaaaaa
actctaatttcgatcttttcttaaggtaaagaggttgtgacatttgggtt
agcgaggcaaaaattgctaaaaagctggtaaaatcgtaatcctcaaaaat
cgaagttccagcctcaaaaaaattaaggccaatatgtttggtttttctga
aggacaaaaggtatgggaagctttactgaaggagggataaggctgggact
atctatttaaaagatatggacaaaaaaaggcacttttttgggtgataatt
gagattttacttagaaactttaattcttttacccccgtctcggccccccc
tgatatgagcaagggaaccatgttggccacccctgctgaaaatttcagat
caaaacaaacaaggagttgattcctgtaactcgatgaaaattggaaaaag
ctgcagtttttgactgtttctgatcctaaagtgctatttatTGGTAAatg
ctatgcaatttatgtttggatttctagaaagcttacccattcattgtcaa
tatattttttatttgaaagtaatctcttcatggaataaaaagatatatag
tcaaatcttgtagggtcatttttcaaaaaaatttctccgaaataaatttt
cgcatttcgccattttaccctacgcaaacgcacgtgagtcaggccacgtg
cgtttggttttggaaagcgaaacacgaacgcgaactaccaatgtcaaaac
ttttcaatattatctccagaactaacagattttttgaaattctgtaaaat
gGTCCAAGTTCCTGagtagttttactatgttctgtgaaaaattCATAACC
ATCAGagaaatactcgttcatctatttaagattgaagacaaaaatttccg
aagaaaaataaacctttagcaaaaaaaatgcttttttaaacacttttttc
caccgaaaaacttttatagacttatcttccccaaacattgaagaagcctc
tactaattcaagtaaatgagataagataagataaaaccttaaaatcaacc
agaatttacaacctttcgtccaaacagtgtggctcgaatccttcagatcc
ttggttagaaaaagctatacctgtttacttttttcttgccagtttcaaca
agccatcaaccaacaaaattacaACTAACATCTGAAAATTCACACGGCCT
TTCCACAGtagacacttctaaattatctgccattatgaagatgttccaaa
attaaccaatcgggtttacaatcggaattcctctgggagttagcgagttg
ggaaatgtaaagttacgtaataagaaaatactgtttttccgggggttaaa
catataaaagaaaattgaaacggtttatttttttcttcattaatatattt
aagtttccgttatcaaaattctagaaatgctaatttgtagaccatattac
aaaatgtttatatatttcgcaaaataaacacttacaaagatattacttac
tatttttacccccgctttTTAAACATCGTCTTCTGTGGGCGTGATATCAG
GCAAAGACAAAACGCCCTCATTGTAAGATTCTCGGGTCATCTTattgttt
gtttcttttgtcAAGTCTGTTGGTCCTATTGTTCATGCTAAATCCATACA
CGATGACGTCAACGTTTGGcggcatacctgaaaataaaaacataaagatt
attattatttttgcataaattaatgtttttttatgcaatttatgtttgga
tttctagaaagcttacccatccATTGTCANCGCTACCTTATACgttatta
taaaattatacaaaacgaaaGCGAGTCTAGGCCGCCCGCCTAGAGAGCGC
AagccctaatattttttctctcgcggcCTTCAGggaaaaacgaaagtgat
caatattcttCAGAAGGAAGAACTTGCCAAAAAAACCCTAGACAAAAAGA
TGATTTTCgaggttgggaatggatcctgcgaagatgaaaaaattctgact
agggttttttttggcaaacccaaaaactctaatttttttcttccctcaag
ctaaaaaggttacgggttttgggcaattgaggcaaaaatcagcaaaaagc
tggtgttttccgtaaatctgagaatcgcgataagatcctcactgccaaag
caaaagacttgcttttctcgccgccatcttgttttagaatgagaattatt
tttgtGTCAGTTCACATGGAAATTTTtacatccaatcagatcgcgcgatt
tcactttcgctttctctagtccaataagactgcaggatttgagtcatgtg
acatctctattgaaaaacttGTGCGAAAtacaatagaaatacagggggtc
acactactggctacaggaactgaaagcaaacaattaagtccaatattttt
ggtttttctgaaggacaaaaggtataggaagctttactgaaggagggata
aggctgggactatctatttaaaagatacagacaaaaaaggcacttttttg
ggtgataattaagttttacttagaaactttaattctcttacccccgtctc
gggcccCCCCTGATATNattttacttagaaactttaattctcttacccac
GTCCTACCCCCcttgatatgagcaagggaaccatgttggccacttctact
gaaaatttcagatcaaaacaaacaaggaattaattcctgtaactcgatga
aaattggaaaaagctggtttttgactgtttctgatcctaaagtgctattt
tttggtaaaagctatgtaATTTaggtttggatttctagaaagcttaccca
tccattgtcaatatattttttataaagtaattgcttcatggaataaaaag
atatagtcaaatcttgtaaggtcatttttttaaattttgccaaaatcgat
tttcacattttgcaattttaccCTACACAAACGCACAtgaggctagctct
aaagctctaaaacagcatctaataacatgaaaaccagaatatgattcttc
aatgggaatcaaggGGCCATCAATaaatgaaaatcctttttttaacGGTC
TCAAGCCGTTAAGACTCtgatatgtcagatctaacaaaattaataatagC
ACcatgtcatcattgacaataaaacaaaggattttctgtcaagagctttg
taaacattccaacaactttcatcgaaatgatctgtcactCCCACTGCAAC
ACTGCtagagtctaccatttttagtgcGGTCAGAGGAgaagtccaaatat
gtgtttcccataatttttgtatgaagagttcaGTCTATACAGTCTTGCAA
TAGTGGATGTTCCTAAAAAGAACTGTCAGGGTTACTTTATTCATCAGtca
gtctaagcttaaactcTTATATCAGGatttagaaactaggctagtcttac
gtcttttatctttccctttacatTTACATCTTTACATCTTCATTCATTTA
ACTGCATTTAAGAGCAAACAGATTTAtagaaaattgttaaaataaaattg
ttttttggggttggtaaagttcacctttgcagatttgagagtttagaagt
acattttgacagacttgatccttaaaaatggtagatcaggaggtaaagat
cttgatgaaagtttgtactatccccatgaaacttttcaaaaaccaaGATT
TCATTGTCTTAGAgggctcattttctgttcaatcttgagcaaaaattgtt
gttttgagcagcattgtcaagatttttaggattttagagtTAAGACAGAC
TTTGATAGTACAGTCTAATTGTGTAAAAATTGTGCACAAAGGCGTACAAG
CATTAGACTTTGCACAATTGaagtttaggggtcaaaaatggatttaaatc
tcagacccaaaaaattggcacctgtttgtgtattttacagaccagaacag
gTTTCCAGGctaaattaaatttcttttactccaaagtatgtcatgttaca
taccgttggaaagcatttttcatgctcgtttagaaaaacattacaaccta
tatctgaaaatgaagccaaaaaaagttattaaggaaaggctttttaaaaa
ttgcagaaaaatgacgtaattgctgatgtcagcaaaaattcAAGGACCAC
CCAAAAATGTTTATTTCTATCAAATTAAATAGagtcaaaagttacagcca
ttatttgtctcagctgcaaactatttcgagacagactttattataggatg
ctttcacaaaatcaagaatcaagtttcaatgggtactcattttgggcaaa
aatttcagccaaaaatgtacttttaagtcaatttttcaaaattaaggtGG
TCAGGGGAGTTAGAAGCTGTCTTTGAGTGAAATTTCAGCCTCTTTAAATT
TTCCTGGAAACCTTTCTGGAATGTGATgaggaatcatgattttcagataa
aatttactttctaactgccaattactggcggcaatagaatgacctcagct
ctagtaaaaaaaattgaaaaaaagcctttttggcccataaaagcacattt
gacaacttttttcacctagtttcattgtttttatacaaaagattcatcat
agcccttatattataaaaattcagtgacctagacccctttgaagtttgcc
aatgggccaaagggccaaaatatcccaaattttagtcatttttcgagTGA
TGTTAAGGATTTGGGATTTTACTAAGTTCATTGCACTTAAAAACATAtcc
caaaatccaaaaaaatctaagtttcaaactattggaactGCCCCAGACTG
CCCCAAACTgccccattcttaaaaaaactggctcttaataATTATGGTAT
CGAGTCATTGTATAATAAAAGGGAAATCGTGAAATTTTTATCACATTATT
AGAAAAATACAATTagtaaaagaaatatttttcaatagttTTAGTGGACA
ATAGATATCCAATCAgtatctttataaaaacaatattatttattttcttt
cagtttctCTTCCATACCTGCAAAGATAGTGTCCGGATACAAAGAAAATC
TTCCACCACTAAATCCTATGAATCAAAAGCCATGGAGTGAACGTTTTAGA
ACCATCCTGAAAAAGCGCCTGAACTTACCAGTATGGGAGTATCGAGATGA
GTTCATCAAGACATGCAGTGAAAATCAATGCGTTGTTTTGGTGGGAGAAA
CTGGTTCAGGCAAAACTACACAGGTAAGACTTAAATGATGTAATAatagt
tttttgaattttgttgttGCTGTCGTTTTCTGTCCAAGCAGTTTGATTAG
TGACCTGAAGTTCAGGATGCAGTGTCAGGGAAGTTGAAAAAGAGGCTCCC
TGTCTCAAATATCCACacaatttgtcaaaatttgaagaatctgAAATTCT
ATGCTGtgaaaaaaccagtttttcatCTCAGCAGGGGGGATATcgagtca
gtgtactggcccatagctggtggggtggtgtattttttaggttaaattga
gttagtacactgtactaaaagggtggtcctctgtctctgagaaaaataca
atgaaaaagttagtacactgtactaaaaagggtggtgttctgaattgata
cacactgagaagttagtacattgtactaaaaagggtggtgttcTGAATTG
ATACACACTGAGAAGTTAGTACATTGTACTAATTTCAGTGGTAAAAATAC
ACAGACCCAGAGAATGCCCATGTATATTTGCCCTAATTTGCCAGGTCCAA
GCTGGAGACCTTCAAATCAAGGCTGaagctaaagtctgtctcgaaataat
ttgcagctggagaaataaatagctgtaacttttgatagaattcgaatcac
gttacggttttgtgctcgttaaaaagatattcgtgagtggaatattatca
agtaaaaaaattgagaaaaaaaaggaaaatgaaaatgaaaaaaagaagaa
gaaaaaaattaacttcttgtagaaatgtggtataattatcattttcacag
gagtgactcttcaatctttattcatcatcactgtgaaaaaattttNNNNN
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NNNNNNNNNNNNNNNttacttgataatattccactcacaaatatcttttt
aacgagcacaaaaccgcaacttgattcgaattctatcaaaagtcacagcc
atttttttctccagctgcaaattatttcgagacagactttacactgattt
tctcccaatgtttcctgtttacttgattggatttgtttcagAGTCGCAGC
ATgcacaagtggagaccggccttaagtccaatcttttttacattttcttt
aaaactttatctacattatggcaacaaaagaatttgaatgtGTAAACGTT
CAAATCGAACCTTTCAAGTCACTTActtttctatttcaaaaaagaaaaac
tgctaCAGCTTGCCAGACAACCAGAAATCAAGTCATAAAAGGGAAATAAC
TCAAAGTTGGTTTTGAGTATTTTGACTTGCTAATTTCACTGTATTCGAAt
gactttgtctgcttcattgtTTCAGTGTTTGTACTACAAGGATTCAGATA
TTTtaaatattcaaatctttccttttatataatttggtgcttttcttagc
aaaaatgcttcaaaaccttTGTATATGGTGGTAATTAAACTTATCTGGCC
AAGGAGAAATTAAaacagtgcactataagggaTGGTTTCTAAACTTATCT
GATCTAAAAAACAGCTAGTatagtgtactaaaagggtggtatcaaaaATC
CGGTCATGGAGAAAAGTCAGTACAGTGTgctaaaagggtggtgtcaaagc
tcCGGCCGTGGAAGGatgttagtacagtgtactaaaagggtggtatcaaa
aATCTGGTCACGGAGATGAGTCAGTACAGTGTgctaaaagggtggtgtca
aagctcCGGCCGTGGAAggaagttagtacagtgtactaaaagggtggtat
caaaaATTCGGTCGTGGAGAAAcgtcagtacagtgtactaaaagggtggt
gtcaaagccccgaccgtggaagaaagttagtacagtgtactaaagaGGGT
GGTggtctatttttttttcaaaaatcaagttagtaccctatggtccagta
cactgacttggtacccccccccctcctgaTCTCAGATGTTTTGTTCACTC
ACACTAAAGGGGCACTAATAACACTGCAATAGTAGTATTGATCAATTTAA
TAGTTGTTATATTTCTGACTTGAAATTATTTTCCTGAATActgaaaattt
gtacaaaaaattttcggcaaaataaagtaaaaactttatttttaccCTTA
TTTTTATCCtgattaaatttaaaagaaaaaaagaaaattgttaaaacTTT
CCAAATACGCAAAAAAGTAGTACCTAATTTACCAACTACAACCCAGGATT
TTTGATTCGACAGCCATGCCAAGTGCTAAAAGGTTCTGGTGTCTTAATGT
ACGACTTATTATTTCTGAACGAGAGTGGAACAATCTTTGCAATCTTTTGA
TTAAAACCTGTTGTTTTTACTTCAGATTCCACAATGGTGCTTAGATTTAG
TAATGTTGGGAAAACGTAAGCACGTCTGTTGTACGCAACCACGTCGAGTA
GCTGCAATGAGTGTTGCTCAACGTGTTGCTGATGAAATGGACTGTGTGAT
TGGTCAGGAAGTTGGATATTCTATTCGTTTCGAAGACTGCTCCAGCTCAA
GAACTGCAATGAAGTAATACTTTTGTTTTTACAGTTTAACTTTTCAATTA
GGTAGCACTTTCAAACTTAACTTTTAAGTATTCAGtattcaattataatt
tttctcTTGATTGGTAGAAAGTTGATCTTCATTCTGTACTTCCAGCCCCT
TcctttttatagaaaattttaGGGTGTAACTTTCTTCActttctaggggg
gggggctgatgCTCAGAGAAAGTTGATCTTTACTATGGTTGACAGTCGAG
TGAGTTGAAACAATCTAACAAGTAATAAAATACTGGTTTCCAAAACCAGT
GCTTTATTTCTTGTTAGATTGTTTCAACTCACTCGTGCAACCAagcttca
ttttcttttattaaGCTTTCTTTCCTACTAATTCTgcgattttaattttt
cagataCATGACAGACGGTATGTTGCTAAGAGAAGCAATGACAGATCCTT
TGCTAGATAGATATGGTGTCATCTTACTCGATGAAGCTCACGAACGTACC
CTTGCTACTGATATCTTGATGGGTCTTATTAAAGAGGTATAAGTTGTCAA
GTTTTTGTGAATCAATCTTGAGTCCATTCTATTCATTCTGTCATCTTGTT
CTTCTGCTATCTCGTTATAGTTCAAACAATAAACAAAGAGCTTGTTATTT
ATTTGAAGGCTGATTAACTCAAATGATATtcaattcacaaaatttaaatT
GCAATACTAATCTTTTGTAGGTTGTTAAGCAACGTCCTGATTTAAAGGTT
ATTATTATGTCTGCCACTCTTGATGctggtaaatttcaaaattattttgg
tgATGCACCTCTTTTGACTATCCCTGGCCGTACCCATCCTGTAGAGATCT
TCTACACTCCAGAACCAGAACGTGACTACTTGGAAGCTGCTATTCGTACT
GTCGTTCAAATTCACTTATGTGAAGAAGTCGAGGGCGATCTCCTCATGTT
CTTGACTGGGCAAGAAGAAATAGACGAAGCATGTAAAAGAATTAAACGTG
AGGTCGACAATCTAGGACCAGAAGTCGGCGACATGAAGATCATTCCACTC
TACTCTACCCTTCCACCGCAATTGCAACAGCGTATTTTTGAGGCTGCGCC
ACCCAAGAAAGCCAATGGCGCTCTTGGTCGTAAAATTGTTGTATCAACAA
ATATCGCTGAAACATCTCTGACTATTGACGGTGTCGTTTTTGTCATTGAT
CCTGGATTCTCGAAACAAAAGGTTTGTGCACTTACTcgggggaatttttt
tttcagaaaataggaaaagggggggttttcaaaaatctagggGGGGGGGN
TAAATATTCAGTATTCAACTATAATTTTTCTCTTGATTGGTAGAAAGTTG
ATCTTCATTctgtacttccagccccctccttttTATAGAAAATGGGGGGG
GCTGATGCTCAGAGAAAGTTGATCTTTACTATGGTTGACAGTCGAGTGAG
TTGAAACAATCTAACAAGTAATAAAATACTGGTTTCCAAAACCAGTGCTT
TATTTCTTGTTAGATTGTTTCAACTCACTCGTGAAAGCAagcttcatttt
cttttattaaGCTTTCTTTCCTACTAATTCTgcgattttaatttttcaga
taCATGACAGACGGTATGTTGCTAAGAGAAGCAATGACAGATCCTTTGCT
AGATAGATATGGTGTCATCTTACTCGATGAAGCTCACGAACGTACCCTTG
CTACTGATATCTTGATGGGTCTTATTAAAGAGGTATAAGTTGTCAAGTTT
TTGTGAATCAATCTTGAATCCATTCTATTCATTCTGTCATCTTGTTCTTC
TGCTATCTCGTTATAGTTCAAACAATAAACAAAGAGCTTGTTATTTTAAA
GGCTGATTAACTCAAATAATATtcaattcacaaaatttatatTGCAATAC
TAATCTTTTGTAGGTTGTTAAGCAACGTCCTGATTTAAAGGTTATTATTA
TGTCTGCCACTCTTGATGCTGGTAAATTTCAANCTGACGCCATTTTCAGA
TATACCGTTAGATTTTAAGTTTCACATTTAGGAACTTCGGTAGAATCAGA
GGATAATGATttttaatcattgtttattGCCACAACACAActtgttttat
attttgaaaggaTAAAAACCTTTCATAGTTGGCAGTTATCCCCGAAATAA
AACCAAAATGATACATTGTTCTACCTGGAAACCTCGGAATAATTAAATCA
ACCTTAAGTCTCATGGAAAAAGAGTTATTCATAATTTGCTGCTTTTAGGT
ATACAACCCCAGGATTCGTGTTGAATCATTATTGGTATCAGCTATTTCAA
AAGCTAGTGCTCAACAAAGAGCAGGTCGTGCTGGTCGTACCAGACCTGGT
AAATGTTTCAGGTGGGTGACTTTTTTTT

Coding sequence (CDS) from alignment at sc0000212:54778..70355+

>TCONS_00015495 ID=TCONS_00015495|Name=TCONS_00015495|organism=Clytia hemisphaerica|type=CDS|length=7632bp|location=Sequence derived from alignment at sc0000212:54778..70355+ (Clytia hemisphaerica)
ATGGCTGACAGAAAACGAAGATTAGATGTTGATGGAGCATCATCCAGCTA
CAAAAAGATGAAAGAGCAAATCCTTCAAACCACCCCAAAAACAAGTAGCA
GtttctCTTCCATACCTGCAAAGATAGTGTCCGGATACAAAGAAAATCTT
CCACCACTAAATCCTATGAATCAAAAGCCATGGAGTGAACGTTTTAGAAC
CATCCTGAAAAAGCGCCTGAACTTACCAGTATGGGAGTATCGAGATGAGT
TCATCAAGACATGCAGTGAAAATCAATGCGTTGTTTTGGTGGGAGAAACT
GGTTCAGGCAAAACTACACAGATTCCACAATGGTGCTTAGATTTAGTAAT
GTTGGGAAAACGTAAGCACGTCTGTTGTACGCAACCACGTCGAGTAGCTG
CAATGAGTGTTGCTCAACGTGTTGCTGATGAAATGGACTGTGTGATTGGT
CAGGAAGTTGGATATTCTATTCGTTTCGAAGACTGCTCCAGCTCAAGAAC
TGCAATGAAataCATGACAGACGGTATGTTGCTAAGAGAAGCAATGACAG
ATCCTTTGCTAGATAGATATGGTGTCATCTTACTCGATGAAGCTCACGAA
CGTACCCTTGCTACTGATATCTTGATGGGTCTTATTAAAGAGGTTGTTAA
GCAACGTCCTGATTTAAAGGTTATTATTATGTCTGCCACTCTTGATGctg
gtaaatttcaaaattattttggtgATGCACCTCTTTTGACTATCCCTGGC
CGTACCCATCCTGTAGAGATCTTCTACACTCCAGAACCAGAACGTGACTA
CTTGGAAGCTGCTATTCGTACTGTCGTTCAAATTCACTTATGTGAAGAAG
TCGAGGGCGATCTCCTCATGTTCTTGACTGGGCAAGAAGAAATAGACGAA
GCATGTAAAAGAATTAAACGTGAGGTCGACAATCTAGGACCAGAAGTCGG
CGACATGAAGATCATTCCACTCTACTCTACCCTTCCACCGCAATTGCAAC
AGCGTATTTTTGAGGCTGCGCCACCCAAGAAAGCCAATGGCGCTCTTGGT
CGTAAAATTGTTGTATCAACAAATATCGCTGAAACATCTCTGACTATTGA
CGGTGTCGTTTTTGTCATTGATCCTGGATTCTCGAAACAAAAGGTATACA
ACCCCAGGATTCGTGTTGAATCATTATTGGTATCAGCTATTTCAAAAGCT
AGTGCTCAACAAAGAGCAGGTCGTGCTGGTCGTACCAGACCTGGTAAATG
TTTCAGGTGGGTGACTTTTTTTATGGCTGACAGAAAACGAAGATTAGATG
TTGATGGAGCATCATCCAGCTACAAAAAGATGAAAGAGCAAATCCTTCAA
ACCACCCCAAAAACAAGTAGCAGtttctCTTCCATACCTGCAAAGATAGT
GTCCGGATACAAAGAAAATCTTCCACCACTAAATCCTATGAATCAAAAGC
CATGGAGTGAACGTTTTAGAACCATCCTGAAAAAGCGCCTGAACTTACCA
GTATGGGAGTATCGAGATGAGTTCATCAAGACATGCAGTGAAAATCAATG
CGTTGTTTTGGTGGGAGAAACTGGTTCAGGCAAAACTACACAGATTCCAC
AATGGTGCTTAGATTTAGTAATGTTGGGAAAACGTAAGCACGTCTGTTGT
ACGCAACCACGTCGAGTAGCTGCAATGAGTGTTGCTCAACGTGTTGCTGA
TGAAATGGACTGTGTGATTGGTCAGGAAGTTGGATATTCTATTCGTTTCG
AAGACTGCTCCAGCTCAAGAACTGCAATGAAataCATGACAGACGGTATG
TTGCTAAGAGAAGCAATGACAGATCCTTTGCTAGATAGATATGGTGTCAT
CTTACTCGATGAAGCTCACGAACGTACCCTTGCTACTGATATCTTGATGG
GTCTTATTAAAGAGGTTGTTAAGCAACGTCCTGATTTAAAGGTTATTATT
ATGTCTGCCACTCTTGATGctggtaaatttcaaaattattttggtgATGC
ACCTCTTTTGACTATCCCTGGCCGTACCCATCCTGTAGAGATCTTCTACA
CTCCAGAACCAGAACGTGACTACTTGGAAGCTGCTATTCGTACTGTCGTT
CAAATTCACTTATGTGAAGAAGTCGAGGGCGATCTCCTCATGTTCTTGAC
TGGGCAAGAAGAAATAGACGAAGCATGTAAAAGAATTAAACGTGAGGTCG
ACAATCTAGGACCAGAAGTCGGCGACATGAAGATCATTCCACTCTACTCT
ACCCTTCCACCGCAATTGCAACAGCGTATTTTTGAGGCTGCGCCACCCAA
GAAAGCCAATGGCGCTCTTGGTCGTAAAATTGTTGTATCAACAAATATCG
CTGAAACATCTCTGACTATTGACGGTGTCGTTTTTGTCATTGATCCTGGA
TTCTCGAAACAAAAGGTATACAACCCCAGGATTCGTGTTGAATCATTATT
GGTATCAGCTATTTCAAAAGCTAGTGCTCAACAAAGAGCAGGTCGTGCTG
GTCGTACCAGACCTGGTAAATGTTTCAGGTGGGTGACTTTTTTTATGGCT
GACAGAAAACGAAGATTAGATGTTGATGGAGCATCATCCAGCTACAAAAA
GATGAAAGAGCAAATCCTTCAAACCACCCCAAAAACAAGTAGCAGtttct
CTTCCATACCTGCAAAGATAGTGTCCGGATACAAAGAAAATCTTCCACCA
CTAAATCCTATGAATCAAAAGCCATGGAGTGAACGTTTTAGAACCATCCT
GAAAAAGCGCCTGAACTTACCAGTATGGGAGTATCGAGATGAGTTCATCA
AGACATGCAGTGAAAATCAATGCGTTGTTTTGGTGGGAGAAACTGGTTCA
GGCAAAACTACACAGATTCCACAATGGTGCTTAGATTTAGTAATGTTGGG
AAAACGTAAGCACGTCTGTTGTACGCAACCACGTCGAGTAGCTGCAATGA
GTGTTGCTCAACGTGTTGCTGATGAAATGGACTGTGTGATTGGTCAGGAA
GTTGGATATTCTATTCGTTTCGAAGACTGCTCCAGCTCAAGAACTGCAAT
GAAataCATGACAGACGGTATGTTGCTAAGAGAAGCAATGACAGATCCTT
TGCTAGATAGATATGGTGTCATCTTACTCGATGAAGCTCACGAACGTACC
CTTGCTACTGATATCTTGATGGGTCTTATTAAAGAGGTTGTTAAGCAACG
TCCTGATTTAAAGGTTATTATTATGTCTGCCACTCTTGATGctggtaaat
ttcaaaattattttggtgATGCACCTCTTTTGACTATCCCTGGCCGTACC
CATCCTGTAGAGATCTTCTACACTCCAGAACCAGAACGTGACTACTTGGA
AGCTGCTATTCGTACTGTCGTTCAAATTCACTTATGTGAAGAAGTCGAGG
GCGATCTCCTCATGTTCTTGACTGGGCAAGAAGAAATAGACGAAGCATGT
AAAAGAATTAAACGTGAGGTCGACAATCTAGGACCAGAAGTCGGCGACAT
GAAGATCATTCCACTCTACTCTACCCTTCCACCGCAATTGCAACAGCGTA
TTTTTGAGGCTGCGCCACCCAAGAAAGCCAATGGCGCTCTTGGTCGTAAA
ATTGTTGTATCAACAAATATCGCTGAAACATCTCTGACTATTGACGGTGT
CGTTTTTGTCATTGATCCTGGATTCTCGAAACAAAAGGTATACAACCCCA
GGATTCGTGTTGAATCATTATTGGTATCAGCTATTTCAAAAGCTAGTGCT
CAACAAAGAGCAGGTCGTGCTGGTCGTACCAGACCTGGTAAATGTTTCAG
GTGGGTGACTTTTTTTATGGCTGACAGAAAACGAAGATTAGATGTTGATG
GAGCATCATCCAGCTACAAAAAGATGAAAGAGCAAATCCTTCAAACCACC
CCAAAAACAAGTAGCAGtttctCTTCCATACCTGCAAAGATAGTGTCCGG
ATACAAAGAAAATCTTCCACCACTAAATCCTATGAATCAAAAGCCATGGA
GTGAACGTTTTAGAACCATCCTGAAAAAGCGCCTGAACTTACCAGTATGG
GAGTATCGAGATGAGTTCATCAAGACATGCAGTGAAAATCAATGCGTTGT
TTTGGTGGGAGAAACTGGTTCAGGCAAAACTACACAGATTCCACAATGGT
GCTTAGATTTAGTAATGTTGGGAAAACGTAAGCACGTCTGTTGTACGCAA
CCACGTCGAGTAGCTGCAATGAGTGTTGCTCAACGTGTTGCTGATGAAAT
GGACTGTGTGATTGGTCAGGAAGTTGGATATTCTATTCGTTTCGAAGACT
GCTCCAGCTCAAGAACTGCAATGAAataCATGACAGACGGTATGTTGCTA
AGAGAAGCAATGACAGATCCTTTGCTAGATAGATATGGTGTCATCTTACT
CGATGAAGCTCACGAACGTACCCTTGCTACTGATATCTTGATGGGTCTTA
TTAAAGAGGTTGTTAAGCAACGTCCTGATTTAAAGGTTATTATTATGTCT
GCCACTCTTGATGctggtaaatttcaaaattattttggtgATGCACCTCT
TTTGACTATCCCTGGCCGTACCCATCCTGTAGAGATCTTCTACACTCCAG
AACCAGAACGTGACTACTTGGAAGCTGCTATTCGTACTGTCGTTCAAATT
CACTTATGTGAAGAAGTCGAGGGCGATCTCCTCATGTTCTTGACTGGGCA
AGAAGAAATAGACGAAGCATGTAAAAGAATTAAACGTGAGGTCGACAATC
TAGGACCAGAAGTCGGCGACATGAAGATCATTCCACTCTACTCTACCCTT
CCACCGCAATTGCAACAGCGTATTTTTGAGGCTGCGCCACCCAAGAAAGC
CAATGGCGCTCTTGGTCGTAAAATTGTTGTATCAACAAATATCGCTGAAA
CATCTCTGACTATTGACGGTGTCGTTTTTGTCATTGATCCTGGATTCTCG
AAACAAAAGGTATACAACCCCAGGATTCGTGTTGAATCATTATTGGTATC
AGCTATTTCAAAAGCTAGTGCTCAACAAAGAGCAGGTCGTGCTGGTCGTA
CCAGACCTGGTAAATGTTTCAGGTGGGTGACTTTTTTTATGGCTGACAGA
AAACGAAGATTAGATGTTGATGGAGCATCATCCAGCTACAAAAAGATGAA
AGAGCAAATCCTTCAAACCACCCCAAAAACAAGTAGCAGtttctCTTCCA
TACCTGCAAAGATAGTGTCCGGATACAAAGAAAATCTTCCACCACTAAAT
CCTATGAATCAAAAGCCATGGAGTGAACGTTTTAGAACCATCCTGAAAAA
GCGCCTGAACTTACCAGTATGGGAGTATCGAGATGAGTTCATCAAGACAT
GCAGTGAAAATCAATGCGTTGTTTTGGTGGGAGAAACTGGTTCAGGCAAA
ACTACACAGATTCCACAATGGTGCTTAGATTTAGTAATGTTGGGAAAACG
TAAGCACGTCTGTTGTACGCAACCACGTCGAGTAGCTGCAATGAGTGTTG
CTCAACGTGTTGCTGATGAAATGGACTGTGTGATTGGTCAGGAAGTTGGA
TATTCTATTCGTTTCGAAGACTGCTCCAGCTCAAGAACTGCAATGAAata
CATGACAGACGGTATGTTGCTAAGAGAAGCAATGACAGATCCTTTGCTAG
ATAGATATGGTGTCATCTTACTCGATGAAGCTCACGAACGTACCCTTGCT
ACTGATATCTTGATGGGTCTTATTAAAGAGGTTGTTAAGCAACGTCCTGA
TTTAAAGGTTATTATTATGTCTGCCACTCTTGATGctggtaaatttcaaa
attattttggtgATGCACCTCTTTTGACTATCCCTGGCCGTACCCATCCT
GTAGAGATCTTCTACACTCCAGAACCAGAACGTGACTACTTGGAAGCTGC
TATTCGTACTGTCGTTCAAATTCACTTATGTGAAGAAGTCGAGGGCGATC
TCCTCATGTTCTTGACTGGGCAAGAAGAAATAGACGAAGCATGTAAAAGA
ATTAAACGTGAGGTCGACAATCTAGGACCAGAAGTCGGCGACATGAAGAT
CATTCCACTCTACTCTACCCTTCCACCGCAATTGCAACAGCGTATTTTTG
AGGCTGCGCCACCCAAGAAAGCCAATGGCGCTCTTGGTCGTAAAATTGTT
GTATCAACAAATATCGCTGAAACATCTCTGACTATTGACGGTGTCGTTTT
TGTCATTGATCCTGGATTCTCGAAACAAAAGGTATACAACCCCAGGATTC
GTGTTGAATCATTATTGGTATCAGCTATTTCAAAAGCTAGTGCTCAACAA
AGAGCAGGTCGTGCTGGTCGTACCAGACCTGGTAAATGTTTCAGGTGGGT
GACTTTTTTTATGGCTGACAGAAAACGAAGATTAGATGTTGATGGAGCAT
CATCCAGCTACAAAAAGATGAAAGAGCAAATCCTTCAAACCACCCCAAAA
ACAAGTAGCAGtttctCTTCCATACCTGCAAAGATAGTGTCCGGATACAA
AGAAAATCTTCCACCACTAAATCCTATGAATCAAAAGCCATGGAGTGAAC
GTTTTAGAACCATCCTGAAAAAGCGCCTGAACTTACCAGTATGGGAGTAT
CGAGATGAGTTCATCAAGACATGCAGTGAAAATCAATGCGTTGTTTTGGT
GGGAGAAACTGGTTCAGGCAAAACTACACAGATTCCACAATGGTGCTTAG
ATTTAGTAATGTTGGGAAAACGTAAGCACGTCTGTTGTACGCAACCACGT
CGAGTAGCTGCAATGAGTGTTGCTCAACGTGTTGCTGATGAAATGGACTG
TGTGATTGGTCAGGAAGTTGGATATTCTATTCGTTTCGAAGACTGCTCCA
GCTCAAGAACTGCAATGAAataCATGACAGACGGTATGTTGCTAAGAGAA
GCAATGACAGATCCTTTGCTAGATAGATATGGTGTCATCTTACTCGATGA
AGCTCACGAACGTACCCTTGCTACTGATATCTTGATGGGTCTTATTAAAG
AGGTTGTTAAGCAACGTCCTGATTTAAAGGTTATTATTATGTCTGCCACT
CTTGATGctggtaaatttcaaaattattttggtgATGCACCTCTTTTGAC
TATCCCTGGCCGTACCCATCCTGTAGAGATCTTCTACACTCCAGAACCAG
AACGTGACTACTTGGAAGCTGCTATTCGTACTGTCGTTCAAATTCACTTA
TGTGAAGAAGTCGAGGGCGATCTCCTCATGTTCTTGACTGGGCAAGAAGA
AATAGACGAAGCATGTAAAAGAATTAAACGTGAGGTCGACAATCTAGGAC
CAGAAGTCGGCGACATGAAGATCATTCCACTCTACTCTACCCTTCCACCG
CAATTGCAACAGCGTATTTTTGAGGCTGCGCCACCCAAGAAAGCCAATGG
CGCTCTTGGTCGTAAAATTGTTGTATCAACAAATATCGCTGAAACATCTC
TGACTATTGACGGTGTCGTTTTTGTCATTGATCCTGGATTCTCGAAACAA
AAGGTATACAACCCCAGGATTCGTGTTGAATCATTATTGGTATCAGCTAT
TTCAAAAGCTAGTGCTCAACAAAGAGCAGGTCGTGCTGGTCGTACCAGAC
CTGGTAAATGTTTCAGGTGGGTGACTTTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008651XLOC_008651Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015495-proteinTCONS_00015495-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015495-exon-sc0000212-1491911889:54778..55601TCONS_00015495-exon-sc0000212-1491911889:54778..55601Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1510915933:54778..55601TCONS_00015495-exon-sc0000212-1510915933:54778..55601Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1575043694:54778..55601TCONS_00015495-exon-sc0000212-1575043694:54778..55601Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1491911889:63331..63550TCONS_00015495-exon-sc0000212-1491911889:63331..63550Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1510915933:63331..63550TCONS_00015495-exon-sc0000212-1510915933:63331..63550Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1575043694:63331..63550TCONS_00015495-exon-sc0000212-1575043694:63331..63550Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1491911889:67803..67990TCONS_00015495-exon-sc0000212-1491911889:67803..67990Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1510915933:67803..67990TCONS_00015495-exon-sc0000212-1510915933:67803..67990Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1575043694:67803..67990TCONS_00015495-exon-sc0000212-1575043694:67803..67990Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1491911889:68381..68513TCONS_00015495-exon-sc0000212-1491911889:68381..68513Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1510915933:68381..68513TCONS_00015495-exon-sc0000212-1510915933:68381..68513Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1575043694:68381..68513TCONS_00015495-exon-sc0000212-1575043694:68381..68513Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1491911889:68698..69198TCONS_00015495-exon-sc0000212-1491911889:68698..69198Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1510915933:68698..69198TCONS_00015495-exon-sc0000212-1510915933:68698..69198Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1575043694:68698..69198TCONS_00015495-exon-sc0000212-1575043694:68698..69198Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1491911889:70226..70355TCONS_00015495-exon-sc0000212-1491911889:70226..70355Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1510915933:70226..70355TCONS_00015495-exon-sc0000212-1510915933:70226..70355Clytia hemisphaericaexon
TCONS_00015495-exon-sc0000212-1575043694:70226..70355TCONS_00015495-exon-sc0000212-1575043694:70226..70355Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000212supercontigsc0000212:54778..70355 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
97.8607	99.8197	111.199	102.757	103.916	84.8529	79.4453	84.4742	78.0355	72.0058	100.396	93.5915	91.4792	94.8746	80.3479	86.7476	75.2862	72.0024	36.7	43.1282	75.534	76.4604	53.8098	61.4006	109.492	118.314	48.6103	55.273	39.7542	40.4334
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR002464DNA/RNA_helicase_DEAH_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
Blast
[Close]
BLAST of TCONS_00015495 vs. Swiss-Prot (Human)
Match: DHX15 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Homo sapiens GN=DHX15 PE=1 SV=2)

HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0
Identity = 307/410 (74.88%), Postives = 346/410 (84.39%), Query Frame = 1 
Query:  766 SSYKKMKEQILQTTPKTSSSFSSIPAKIVSGYKENLPPLNPMNQKPWSERFRTILKKRLNLPVWEYRDEFIKTCSENQCVVLVGETGSGKTTQIPQWCLDLV--MLGKRKHVCCTQPRRVAAMSVAQRVADEMDCVIGQEVGYSIRFEDCSSSRTAMKYMTDGMLLREAMTDPLLDRYGVILLDEAHERTLATDILMGLIKEVVKQRPDLKVIIMSATLDAGKFQNYFGDAPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHLCEEVEGDLLMFLTGQEEIDEACKRIKREVDNLGPEVGDMKIIPLYSTLPPQLQQRIFEAAPPKKANGALGRKIVVSTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVSAISKASXXXXXXXXXXTRPGKCFRWVT 1989
            +S+         +T  T S+ S+      +G+      +NP    P + R+  ILKKRL LPVWEY+D F      +Q  VLVGETGSGKTTQIPQWC++ +  + G ++ V CTQPRRVAAMSVAQRVADEMD ++GQEVGYSIRFEDCSS++T +KYMTDGMLLREAM DPLL+RYGVI+LDEAHERTLATDILMG++KEVV+QR DLKVI+MSATLDAGKFQ YF + PLLTIPGRTHPVEIFYTPEPERDYLEAAIRTV+QIH+CEE EGDLL+FLTGQEEIDEACKRIKREVD+LGPEVGD+KIIPLYSTLPPQ QQRIFE  PPKK NGA+GRK+VVSTNIAETSLTIDGVVFVIDPGF+KQKVYNPRIRVESLLV+AISKASAQQRAGRAGRTRPGKCFR  T
Sbjct:   79 ASHSAHSTHSAHSTHSTHSAHSTHAGH--AGHTSLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYT 486
The following BLAST results are available for this feature:
BLAST of TCONS_00015495 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHX150.000e+074.88Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
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