XLOC_008357 (gene) - C. hemisphaerica

Overview
NameXLOC_008357
Unique NameXLOC_008357
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000201:371092..381394+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008357 ID=XLOC_008357|Name=XLOC_008357|organism=Clytia hemisphaerica|type=gene|length=10303bp|location=Sequence derived from alignment at sc0000201:371092..381394+ (Clytia hemisphaerica)
CGGTTTTCAAAGAACAAGAAAGTCAGAAGAAATCAAGTACTGTATTTTTC
GAGAATTTTGATAACCTCTGCACATTGGAATATACCGCGTTCTGTATTTT
GTCATGAAGAAACTAGTGTGATACTTCTACTTGAAACCTGACGGCAAATA
AAGATCTACTGGTGACGGTAAGCAAAAGTAAACGCTTTTTGGTTTTATTC
GACTTTTGGTTTTATTTGAGACCTTTttatttatcttcttttttgCTGTT
CTTGCTGGTTCTTGTCGATTTCACAGACCTTACCTTAGAGAGacttaaat
tttgcaaaaagtgACCATCAGAGAGGCGATATTCGAAAACTGTCTCACCT
TTAAGAAATTTTCATAACTTTGATTCGATTTtaagagactttgaaaggta
aaAAAAGCTCCTTCGTTATGGTCTGCACATACCAAAGTACCCAAATGTTC
CTAAGTAACCTCCTGTCCTAATTTTGGTGACTGATGAATCCAGCACTGTC
AATCAAAGTAGCTCTCATGGGCGTAATCCACTATTTCtaacaaataagaa
aatattatatCCGTGAATCATTTTTAGGaacgtcaaatttaaaaaaaaac
attaatcaGTTTGGAACATTTGTTAGATAGTAAGCACATGATTTTCCCTC
TAATAGTCATCATATTTTTGTTCTGTCCCACTAGCTATGTTTTTGAAGTT
GGAATCGGCTCGAAAGAATGAAAAAGACGAAGAGAACATTCCCTTAACGA
GTAACAGATCGACAATACACTCGGGGCGTGAACAATTTCCACCTCCAGCC
GGGCGGAATTTATATACACCGCCTTTAATTGTCAAAACACCGGATGAAGA
CTATCGAAAACAGTTCAACTCAACATCAGGTACGATTTATTGTCTAGTGC
TAGGTTNATTCTACTTTGATATTGCCAGAATATATGTGCTCTTCTTTTTA
AGAAACTTAATTTTTCAATAGAACCTTaacttcattaaaatatttatcat
aACACTGTATGAATCGGCTATCGAAATTCTCTTCTTTCTCTTTACTATCT
TTTTCAGCGTGCGGTTTTCAAAGAACAAGAAAGTCAGAAGAAATCAAGTA
CTGTATTTCGAGAATTTTGATAACCTCTGCACATTGGAATATACCACGTT
CTGTATTTTGTCATGAAGAAACTAGTGTGATACTTCTACTTGAAACCTGA
CGGCAAATAAAGATCTACTGGTGACGGTGAGGAAAAGCGTTTTGGTTTTA
TTCGAGATCTTAaacctttttatttattttcttttttgctgTTCTTGCTG
GTTCTTGTCGATTTCACAGACTTTACCTTAGAGAGACTTAATTTTGCGAA
ANTACGATTTATTGGCTAGTGCTAGGTCGCGGCAGCTACAAGGTTTTACT
GTAGGATTTCCATCAAGAGCAAACTGCATGTTTAGTACCTTTTCAAGTAG
CAGCTTTTCAAGTTCTGAGAGTCTGCAAAATATGAGCCAGAGTGAAGAAT
CTTGCTGACGTTATCTACATTTTCACATCGAAATTTTCCTTTAAGCTGAC
AACGTTTTGTTAAGAACTCTAGATTAATTCATGCcttaataattttataa
aaccGCTGAATGATATTTCGCTAATTCTTTTACCTGTGACTTGTAGCAAA
AGATGGTACTGATATAGGCTACCTGATGCGTTCTCCAAAACGACAAAATG
GTGGACCGTCCAATAGAAATCATCGAACCAGGGACCATGTTGATGCCGTC
AACTTTCGAAGACGAAACAAACAAAACCAAAGATCCGTTCAAAACAAACG
ATCCGTTATTGAAGAGCCTTTCAGACGCCATAATTACAAAAGCCCGGCGC
CTCTCGATGAAGCACGCATTTCAGTCAAGCAGCGTACGCTTGAAGAACGC
GGAGANATAATTACAAAAGCCCGGCGCCTCTCGATGAAGCACGCATTTCA
GTCAAGCAGCGCACGCTTGAAGAACGCGGAGAAATCGAAGGGCATGATCT
TTTGACAGGTAAGACTTTTCAATATGTACATTTTCAACAATAGGACGAGT
ATCGTCAAACATAGTAAGCGATCTATTGTTGTATTATGATCTTACTAAAA
CACTCACGACATAAACGACTTGAATAACTACAGTTGAAGTTGAATGAGTA
AAATTATTATGAATTATAACGTGTTCTTTGATGATATCGAGCGTGCTTTA
TCACTTGTNCATTTGTTAGATAGCAAGCACATGATTTTCCGTCTAATAGT
GatcatatttttgttttatctcACTAGCTATGTTTTTGAAGTTGGAATCG
GCTCGAAAGAACGAAAGAGACGAAGAGAACATTCCCTTAACGAGCAACAG
ATCGACAATACACTCGGGGCGTGAACAATTCCCACCTCCAGCCGGGCGGA
ATTTATATACACCGCCCTTAATTGTCAAAACACCGGATGAAGACTATCGA
AAACAGTTCAACTCAACATCAGGTACGATTTATTGGCTAGTGCTAGGTCG
CGGCAGCTACAAGGTTTTACTGTAGGATTTCCATCAAGAGCAAACTGCAT
GTTTAGTACCTTTTCAAGTAGCAGCTTTTCAAGTTCTGAGAGTCTGCAAA
ATATGAGCCAGAGTGAAGAATCTTGCTAATGTTATCTACATTTTCACatt
caaattttcctctaaGCTGACAACGTTTTGTTAAGAACTCTAGATTTATT
CTCCCTTATTCCCTCGTGCCTCAATAATTTTGTAACCGCTGAATGATATT
TCGCTAATTCTTTTACCTGTGACTTGTAGCAAAAGACGGTACTGATATAG
GCTATCTGATGCGTTCTCCAAAACGACAAAATGGTGGACCGTCCAATAGA
AATCATCGAACCAGGGACCATGTTGATGCCGTCAACTTTCGAAGACGAAA
CAAACAAAACCAAAGATCCGTTCAAAACAAACGATCCGTTATTGAAGAGC
CTTTCAGACGCCATAATTACAAAAGCCCGGCGCCTCTCGATGAAGCACGC
ATTTCAGTCAAGCAGCGCACGCTTGAAGAACGCGGAGAAATCGAAGGGCA
TGATCTTTTGACAGGTAAGACTTTTCAATATGTACATTTTCAACAATAGG
ACGAGTATCGTCAAACATAGTAAGCGATCCATTGTATAGATTATGATCTT
ACTAAAACACTCACGACATAAACGACTTGAATAACTACAGTTGAAGTTGA
ATGAGTAAGATTATTATGGATAATAACGTGTTCTTTGATGATATCGAGCG
TGCTTTATCACTTACTTCTTACCAACAGGCAATCGTGGAGCATCGATGGG
GATGTTGGATAGCGATGGGAACAGTAGCGACAATGGCGAAACTACATTAC
GAAAAAAGAAGAATACATATATCAAGAGCAAAGAACTCATCACTTATTTT
GCACAACTCGCTCGAAGTAAGAACCCTACCGATGCAATAGATCTCAAGAT
GGTGGACCGTCTCATTCGCAATGGTGCCAACCTCAACGTTACCGATAAAT
ACGGTCAAACGGTCATGCATGAAGTGGCAAAGAACTGGCACACTGACGTC
GCAAAATATCTCATCAAGCGGGGCGCTATTTACGACGCCAAAGACCGTTA
TGGGCGGACACCCCTTCATCTTGCATCGGCTGTGGGACATGTAGAAATGA
TTGATTTTTTAGTGGGTCAAGATCACGGTaagttttatcatttttttttt
tttttcgataaaaATCTTTATGACGGTTTTAAGTCCCTTACTGAAATGTA
TAAGGGAATTTCGCTCAGACTTTAATGCGTTCTAATATATGTTATCCGAT
ATTACAAATCATTTTTGTAGAATTCGACTTTCTTTCCCTTACAGTTTTGC
CTGTAGTCTATGGCCATAAAGATTTCAAGGGCCTGATTTGCTTAtcccct
ttaaaaaaattctctaaataATACTATTTTTGAAGCTGACTATTCTTGTC
TCGGTTTACTAAGGAATGATCCCTTACTTAATATCCTATTACGCCATTGC
GAGGAAAGGTCGACCAAAATCGTTGTATACCTTATTGATCGGGCGGTTTG
TGGTGCTATCAATGGTGCACGGGTCGCGGCTTCACTAGATCCCTACTGTT
TCACAATTAAAAGAGGACGTATCGCACTCATTCCACTAAATGACTGTANG
ATCCCTACTGTTTCACAATTAAAAGAGGACGTATCGCACTCATTCCACTA
AATGACTGTAAAAGGCTTTGATTCGTAAACTTGAACATTTTCAGAGAAAC
TAAAAGACGTGACGAAGGACGAGCGTCAGACAGCGCTTCATTACGCAGCA
AAGAACAACTCAGTAGGAGCGTTGAAAGTCCTTTTGAAGCTGGGTGCGTC
GATGAACGATCGAGACTATCGATTACGTACTGCTCTCCATCTCGCTGCTG
AAAACGGTAATATGCTTTTTTTAGTAATAATTCTTACTTAAGAGTGATAT
TTGCTTGACTTCATTTCATATAAAACTATTACAATGTCAAAAAACAAACA
CTTTTTACCAGTGTTTTTGTCCGGTTGACACTTTTTCAAGAACGAAATTC
AATTTAACCTTTACATGTCCCCtgtttttcaaatgaaaatggaGAACTAG
GGGTTTTGGAAGGCTAAAAAGAAATCGATTGAACGGAGGAGTTAAAAAAT
TAGCTTTGTTTTGGAAATGCCCCCCCACAGACTTGTAAGACAAAATTATT
CTGTACTCAAATATTTCCTTGAGATTACTGCTGCTTCTCGATTTTCAGGA
CGTATTGAAGCTGCGCGATATTTATTGAGCAAGAACGCTCCATGTGCAGT
GTACGATGATCAAGGTGTTTCATGTCTCTCCATCATGGTTCAGAAGATGC
CTGGTGTAGCCTTCCTGGCCTTGCAACAATTCTACGCTGAAGATCCTGCC
AATAGAAAACTATATTGCTATTTGAATTACTTGGAGAAGAAGTTGTTAGC
AGATGAGGAGTTGCAGATCAGTTGGAAATATTTGACCAAGATGGAACGAG
AACGTCAAAAACGTGAATTGTCACTGAATGAGATGGTGACCAAGAAACAG
ATTAAGAAAGGTGAACTTGCCAAGTCCGTCTTGGAGGTGAGCACTCTTCT
GTTAGAATATCTACCTCGAAACTCTTCTCTTGGACATCTGAATCTTCTTG
GCTAAATTccttttttttggacctacctccgggtaccccggtggaggttc
tataaattaacccatgtccgttcgtccgtccgtctgtccgttcgttcgtc
cgtccgtccgtccgtctgttaccagcttttctcaggattggctcattagt
tttttctgattttttgcgcaatgatgcaaaatggcaatgcccagaacgtg
acggagtctgatttttgagaaaaaaattatttgggcaaatatgggccaaa
aactacctaaaaatagggttttttggacttggaaattccctttaaccaaa
taagaaaatatagcttttctcaatgttgactcgttatttttttctggttt
tttacacaatgatgcaaaatggcaatgcctaaaatgtgtcggagtctgat
tttcgaaacaaaatatatttggtcaaatttgggccaaaaactgcctaaaa
atagggttttttggactttgtgcaaaatcctgtcattacttttttctgat
tttttgtacaaagatggagggcaagattctctaaagaatggctgaagtgg
tttttctcggaaaattcttattcgccttaaaagacggattttcgtatttN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNaaccaaataagaaaatatagcttttctcaatgtt
gactcataatttttttctgattttttgcacaatgatgcaaaatggcaatg
cctaaaatgtgtcggggccgattttcgaaacaaaatatatttggtcaaat
ttgggccaaaaacagcttaaaaggttttttgggcctgaatggtttaagtg
attttcgtatttggggaaattcctttttaccattttacattattcaaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt
ccattctgaatttttgtataattattgtcacttttttcttattttcatct
gatgttaatcattaggtaggtccattcagcatgttgcttgttttttcttg
aattcCTCTAAATCTAATTTTCCCCTATTTTAAACCAAATATCTGGCTCC
TTGAGGTGTGTTTCATGGCTGATTTCCTTGAAGGCTCAAGAGGGATTGAT
TCAGCTGTAAATATGTTTGGGCACTCAGAAGTTAGACAACAACCTCGTTA
CGATATAGTCTCAGTCAACATCGGAAGGATGAGAATACGCTGAGGAAACG
AGGTTTAGTAGATGTGTGTTCGGGAAAATGTCACTCTCTACCATTTATGT
ACTATATTGAACGCATCCTCTCAGGTAGGGGNTGTTCGGGAAAATGTCAC
TCTCTACCATTTATGTACTATATTAAACGCATCCTCTCAGGTAGGGAATA
CGATTCACTCTCCCCTTCAAAAGATAATAACgagtttttttctttcgttC
ATGTTCAGAAAGTAGTTGAGCATTGGGAAGTATCTTTAGTAGTCCATCCA
GCCATTCAATTATTAATAAAAAAGAAGTGGATGCTGATTGGTCGAAAGGC
TTCAATTTTCAGTCTCGTTCTCAACGTCATTTACGCACTTTTATGGTCGG
CAGTTGGCGTCGCAACGCCGGTAATGGGACCAACAATTTATCGGCCCTTT
TCGCTGTGGTGGCATATTACAGTGCTTGAGGTGATCGGAGTTGGCTTGAC
CATCTATTTCATGGCTACTGTGAGTATATACTCTTTTAAGTTTGTCATTG
AGCTCGTAcagaaagaaatctttttacaGTATCAcagtttttccgaaaat
ttcataatttctgCTACTTTTGTTTTCCGATATTCACGAGACATGAATTT
ACTGATGTTGTCTTATGGTGtaaactaattaaatattcTATACGATTTTT
CTCTCTCGATCCTTTACAGCACATTGTGGAGATCCAGATCGACAAGCGAC
GTGATAACGCTTATGGGAAATGGGTGATCGCACAAGCAGAACGCGACCTC
AAATATTGTCATCCCAGGTGGCCTGAAGAGAGACGTCACATTGATGACAC
CATTGAAGCTATtggaaatcgaaagcgaaagcgaTATTTCTCCGATGGAT
GGAATTGTTTTGATTGGTTCGTTTATTTGTTGGTATGGGTCGTTATGGCA
ACTCGTTTATTGAACCTCTTACTGGAGGACGATAAATTGAAATATTACCA
CATGCGCATCTTCTCTCTCACACTTATCTTCATTTGGCTTCGTCTATTAC
GCAGACTGAAACCTTTCCCTTACTTCGGGCCTTTCATTATCATGCTGGGC
TACGTCGTTATAGATACCATAAAATTTCTggtcttgtttttattgattta
caTTCCGTATTGTTGCGCTTTTTGGATGATCTTCGGCGGACCACAATTAC
GTCATTCCAAATCATTTCTTCACGAGATCAATGATATGGtgtatgatatt
tttcaaatgtcattAGTGGGCGAGTTCAAATGGAAAGAATTTGTGGAGAT
TGATGAAACATTTGCACAGGTATGCTGATAAAGTACTTTTTTACTACATA
TTTTAGGAACCAGTTCTGTTGTGATTACCGAAGCTTTCGATAGAAATAAA
TAATTACAAGCCGTTTCTTGGAGTGAAATAAACTTGTCAGTCTTAccgat
ttttaaaataaatgaaatcaaCGAACAACATTTTATTTCAATCCTCTCTT
AGACTTTTCACTGTCTTCTGTTTCAGCTTTTGACGGGTTCTTACATGGGT
TTGACGTCAGTGGTTGCCATCAGTTTGTACATAGCTTTGTTGGCGACCAC
CTTTTCTCGGAAGTATCCACAAAGTGTAGCCATGGCGCTCATCATGCAAG
CGGAAAGATGCGTACAGGTGGAACGAATGATCCCTAAGAAAACACACTTG
AACATGAAAGCTTTCTTCCACGAAGACTGTGCACCTTTGGTAAGAATATC
TTAGAGGAAAAGAATTATGACGgcaatttaatttggcagttgaaagatat
tttttactAGAAATCATTGTTGAATAAGAATTAAACTTGTTTTGACACCT
GAAATAGCACGAGTATGGGAAAcggttgaaaaaaatctaatttggtGGAC
ATTTAATTAAAGGATGGTAAAAATAGGGCATTTTGAAGGGAACTTAATTT
GGGGGATATTTTATCCAATATACGGGCTTGTCTCTTTTTCTATCTGCGAT
CccacaacaaaaaaatttagtcACAAAATTTAAACAGATAGCCCCGCTGC
CAATGCTTAGTTCGGATGTGATCAAGATTTGCTATGTTTCGCTAGATTTA
TATTATTTCTTAACGATTCTTGTCCAGGTTGAGGAAATGAAAGGTNTGTT
TCGCTagatttatattattttttaacgATTCTTGTCCAGGTTGAGGAAAT
GAAAGGTGAATCAATCTCTATAGCAACTAACAACGCGACGTTGAGCAAGT
TGGATTTCAGTCGTTGGAGAGGTCGTCATGAAAACGAAATCGATGAAGTT
CGTTACAGTATGAGAGAATTGAATAAAAAGCAAGATCGTCTCGTTCATCA
GTTCAGGTTTATTCTCGATAACCTtgacgatgatgatgatatGGTCAGTG
AAATATAGACTTTTTGGCTAAATCATCTGAAATTTGGTTTTGATAGGCGA
GGTGAATCATCGTCAGTAAAATGAGGCAATGATTTTTCCTGAATCTTTTC
ATGAATATGGGACGGACGAAGCAATGGAATCTTGAACTTTGTGATAAAGA
CAATATGGGAACTGGGGTTATCCACAGACTACAGTTTGTGATAAGAAATT
CTTTTGACGTAGCAGTTATGGTGAAACTTTAAACATTTATATTTCAAGAC
ACTATTTTTGGAACTGAGGAGAGCATTCACAAAATAAGTGAAACCATTGA
GCCCTTTTTAACGGTTAAAATAGTTTGGTCTCTTTACTACAAATTACGTA
TTGTAGAAGCTATGAAATtcagtactctcgggtaccttatagccgggggg
ggg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014943TCONS_00014943Clytia hemisphaericatranscript
TCONS_00014944TCONS_00014944Clytia hemisphaericatranscript
TCONS_00014945TCONS_00014945Clytia hemisphaericatranscript
TCONS_00014946TCONS_00014946Clytia hemisphaericatranscript
TCONS_00014947TCONS_00014947Clytia hemisphaericatranscript
TCONS_00014948TCONS_00014948Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014943-proteinTCONS_00014943-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:371092..381394 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19	0.13	0.05	0.03	0.16	0.15	0.72	0.64	1.69	1.3	1.52	0.98	8.73	8.17	3.79	4.49	2.18	2.51	5.64	8.75	2.84	2.75	1.19	1.83	2.94	3.13	0.93	0.39	0.08	0.05