TCONS_00014947 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014947
Unique NameTCONS_00014947
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3218

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014947 ID=TCONS_00014947|Name=TCONS_00014947|organism=Clytia hemisphaerica|type=transcript|length=3218bp
AGAAAGTCAGAAGAAATCAAGTACTGTATTTTTCGAGAATTTTGATAACC
TCTGCACATTGGAATATACCGCGTTCTGTATTTTGTCATGAAGAAACTAG
TGTGATACTTCTACTTGAAACCTGACGGCAAATAAAGATCTACTGGTGAC
GCTATGTTTTTGAAGTTGGAATCGGCTCGAAAGAATGAAAAAGACGAAGA
GAACATTCCCTTAACGAGCAACAGATCGACAATACACTCGGGGCGTGAAC
AATTCCCACCTCCAGCCGGGCGGAATTTATATACACCGCCCTTAATTGTC
AAAACACCGGATGAAGACTATCGAAAACAGTTCAACTCAACATCAGCAAA
AGACGGTACTGATATAGGCTATCTGATGCGTTCTCCAAAACGACAAAATG
GTGGACCGTCCAATAGAAATCATCGAACCAGGGACCATGTTGATGCCGTC
AACTTTCGAAGACGAAACAAACAAAACCAAAGATCCGTTCAAAACAAACG
ATCCGTTATTGAAGAGCCTTTCAGACGCCATAATTACAAAAGCCCGGCGC
CTCTCGATGAAGCACGCATTTCAGTCAAGCAGCGCACGCTTGAAGAACGC
GGAGAAATCGAAGGGCATGATCTTTTGACAGGCAATCGTGGAGCATCGAT
GGGGATGTTGGATAGCGATGGGAACAGTAGCGACAATGGCGAAACTACAT
TACGAAAAAAGAAGAATACATATATCAAGAGCAAAGAACTCATCACTTAT
TTTGCACAACTCGCTCGAAGTAAGAACCCTACCGATGCAATAGATCTCAA
GATGGTGGACCGTCTCATTCGCAATGGTGCCAACCTCAACGTTACCGATA
AATACGGTCAAACGGTCATGCATGAAGTGGCAAAGAACTGGCACACTGAC
GTCGCAAAATATCTCATCAAGCGGGGCGCTATTTACGACGCCAAAGACCG
TTATGGGCGGACACCCCTTCATCTTGCATCGGCTGTGGGACATGTAGAAA
TGATTGATTTTTTAGTGGGTCAAGATCACGAGAAACTAAAAGACGTGACG
AAGGACGAGCGTCAGACAGCGCTTCATTACGCAGCAAAGAACAACTCAGT
AGGAGCGTTGAAAGTCCTTTTGAAGCTGGGTGCGTCGATGAACGATCGAG
ACTATCGATTACGTACTGCTCTCCATCTCGCTGCTGAAAACGGACGTATT
GAAGCTGCGCGATATTTATTGAGCAAGAACGCTCCATGTGCAGTGTACGA
TGATCAAGGTGTTTCATGTCTCTCCATCATGGTTCAGAAGATGCCTGGTG
TAGCCTTCCTGGCCTTGCAACAATTCTACGCTGAAGATCCTGCCAATAGA
AAACTATATTGCTATTTGAATTACTTGGAGAAGAAGTTGTTAGCAGATGA
GGAGTTGCAGATCAGTTGGAAATATTTGACCAAGATGGAACGAGAACGTC
AAAAACGTGAATTGTCACTGAATGAGATGGTGACCAAGAAACAGATTAAG
AAAGGTGAACTTGCCAAGTCCGTCTTGGAGAAAGTAGTTGAGCATTGGGA
AGTATCTTTAGTAGTCCATCCAGCCATTCAATTATTAATAAAAAAGAAGT
GGATGCTGATTGGTCGAAAGGCTTCAATTTTCAGTCTCGTTCTCAACGTC
ATTTACGCACTTTTATGGTCGGCAGTTGGCGTCGCAACGCCGGTAATGGG
ACCAACAATTTATCGGCCCTTTTCGCTGTGGTGGCATATTACAGTGCTTG
AGGTGATCGGAGTTGGCTTGACCATCTATTTCATGGCTACTCACATTGTG
GAGATCCAGATCGACAAGCGACGTGATAACGCTTATGGGAAATGGGTGAT
CGCACAAGCAGAACGCGACCTCAAATATTGTCATCCCAGGTGGCCTGAAG
AGAGACGTCACATTGATGACACCATTGAAGCTATtggaaatcgaaagcga
aagcgaTATTTCTCCGATGGATGGAATTGTTTTGATTGGTTCGTTTATTT
GTTGGTATGGGTCGTTATGGCAACTCGTTTATTGAACCTCTTACTGGAGG
ACGATAAATTGAAATATTACCACATGCGCATCTTCTCTCTCACACTTATC
TTCATTTGGCTTCGTCTATTACGCAGACTGAAACCTTTCCCTTACTTCGG
GCCTTTCATTATCATGCTGGGCTACGTCGTTATAGATACCATAAAATTTC
TggtcttgtttttattgatttacaTTCCGTATTGTTGCGCTTTTTGGATG
ATCTTCGGCGGACCACAATTACGTCATTCCAAATCATTTCTTCACGAGAT
CAATGATATGGtgtatgatatttttcaaatgtcattAGTGGGCGAGTTCA
AATGGAAAGAATTTGTGGAGATTGATGAAACATTTGCACAGCTTTTGACG
GGTTCTTACATGGGTTTGACGTCAGTGGTTGCCATCAGTTTGTACATAGC
TTTGTTGGCGACCACCTTTTCTCGGAAGTATCCACAAAGTGTAGCCATGG
CGCTCATCATGCAAGCGGAAAGATGCGTACAGGTGGAACGAATGATCCCT
AAGAAAACACACTTGAACATGAAAGCTTTCTTCCACGAAGACTGTGCACC
TTTGGTTGAGGAAATGAAAGGTGAATCAATCTCTATAGCAACTAACAACG
CGACGTTGAGCAAGTTGGATTTCAGTCGTTGGAGAGGTCGTCATGAAAAC
GAAATCGATGAAGTTCGTTACAGTATGAGAGAATTGAATAAAAAGCAAGA
TCGTCTCGTTCATCAGTTCAGGTTTATTCTCGATAACCTtgacgatgatg
atgatatGGTCAGTGAAATATAGACTTTTTGGCTAAATCATCTGAAATTT
GGTTTTGATAGGCGAGGTGAATCATCGTCAGTAAAATGAGGCAATGATTT
TTCCTGAATCTTTTCATGAATATGGGACGGACGAAGCAATGGAATCTTGA
ACTTTGTGATAAAGACAATATGGGAACTGGGGTTATCCACAGACTACAGT
TTGTGATAAGAAATTCTTTTGACGTAGCAGTTATGGTGAAACTTTAAACA
TTTATATTTCAAGACACTATTTTTGGAACTGAGGAGAGCATTCACAAAAT
AAGTGAAACCATTGAGCCCTTTTTAACGGTTAAAATAGTTTGGTCTCTTT
ACTACAAATTACGTATTGTAGAAGCTATGAAATtcagtactctcgggtac
cttatagccggggggggg
Run BLAST on NCBI

transcript from alignment at sc0000201:371108..381394+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014947 ID=TCONS_00014947|Name=TCONS_00014947|organism=Clytia hemisphaerica|type=transcript|length=10287bp|location=Sequence derived from alignment at sc0000201:371108..381394+ (Clytia hemisphaerica)
AGAAAGTCAGAAGAAATCAAGTACTGTATTTTTCGAGAATTTTGATAACC
TCTGCACATTGGAATATACCGCGTTCTGTATTTTGTCATGAAGAAACTAG
TGTGATACTTCTACTTGAAACCTGACGGCAAATAAAGATCTACTGGTGAC
GGTAAGCAAAAGTAAACGCTTTTTGGTTTTATTCGACTTTTGGTTTTATT
TGAGACCTTTttatttatcttcttttttgCTGTTCTTGCTGGTTCTTGTC
GATTTCACAGACCTTACCTTAGAGAGacttaaattttgcaaaaagtgACC
ATCAGAGAGGCGATATTCGAAAACTGTCTCACCTTTAAGAAATTTTCATA
ACTTTGATTCGATTTtaagagactttgaaaggtaaaAAAAGCTCCTTCGT
TATGGTCTGCACATACCAAAGTACCCAAATGTTCCTAAGTAACCTCCTGT
CCTAATTTTGGTGACTGATGAATCCAGCACTGTCAATCAAAGTAGCTCTC
ATGGGCGTAATCCACTATTTCtaacaaataagaaaatattatatCCGTGA
ATCATTTTTAGGaacgtcaaatttaaaaaaaaacattaatcaGTTTGGAA
CATTTGTTAGATAGTAAGCACATGATTTTCCCTCTAATAGTCATCATATT
TTTGTTCTGTCCCACTAGCTATGTTTTTGAAGTTGGAATCGGCTCGAAAG
AATGAAAAAGACGAAGAGAACATTCCCTTAACGAGTAACAGATCGACAAT
ACACTCGGGGCGTGAACAATTTCCACCTCCAGCCGGGCGGAATTTATATA
CACCGCCTTTAATTGTCAAAACACCGGATGAAGACTATCGAAAACAGTTC
AACTCAACATCAGGTACGATTTATTGTCTAGTGCTAGGTTNATTCTACTT
TGATATTGCCAGAATATATGTGCTCTTCTTTTTAAGAAACTTAATTTTTC
AATAGAACCTTaacttcattaaaatatttatcataACACTGTATGAATCG
GCTATCGAAATTCTCTTCTTTCTCTTTACTATCTTTTTCAGCGTGCGGTT
TTCAAAGAACAAGAAAGTCAGAAGAAATCAAGTACTGTATTTCGAGAATT
TTGATAACCTCTGCACATTGGAATATACCACGTTCTGTATTTTGTCATGA
AGAAACTAGTGTGATACTTCTACTTGAAACCTGACGGCAAATAAAGATCT
ACTGGTGACGGTGAGGAAAAGCGTTTTGGTTTTATTCGAGATCTTAaacc
tttttatttattttcttttttgctgTTCTTGCTGGTTCTTGTCGATTTCA
CAGACTTTACCTTAGAGAGACTTAATTTTGCGAAANTACGATTTATTGGC
TAGTGCTAGGTCGCGGCAGCTACAAGGTTTTACTGTAGGATTTCCATCAA
GAGCAAACTGCATGTTTAGTACCTTTTCAAGTAGCAGCTTTTCAAGTTCT
GAGAGTCTGCAAAATATGAGCCAGAGTGAAGAATCTTGCTGACGTTATCT
ACATTTTCACATCGAAATTTTCCTTTAAGCTGACAACGTTTTGTTAAGAA
CTCTAGATTAATTCATGCcttaataattttataaaaccGCTGAATGATAT
TTCGCTAATTCTTTTACCTGTGACTTGTAGCAAAAGATGGTACTGATATA
GGCTACCTGATGCGTTCTCCAAAACGACAAAATGGTGGACCGTCCAATAG
AAATCATCGAACCAGGGACCATGTTGATGCCGTCAACTTTCGAAGACGAA
ACAAACAAAACCAAAGATCCGTTCAAAACAAACGATCCGTTATTGAAGAG
CCTTTCAGACGCCATAATTACAAAAGCCCGGCGCCTCTCGATGAAGCACG
CATTTCAGTCAAGCAGCGTACGCTTGAAGAACGCGGAGANATAATTACAA
AAGCCCGGCGCCTCTCGATGAAGCACGCATTTCAGTCAAGCAGCGCACGC
TTGAAGAACGCGGAGAAATCGAAGGGCATGATCTTTTGACAGGTAAGACT
TTTCAATATGTACATTTTCAACAATAGGACGAGTATCGTCAAACATAGTA
AGCGATCTATTGTTGTATTATGATCTTACTAAAACACTCACGACATAAAC
GACTTGAATAACTACAGTTGAAGTTGAATGAGTAAAATTATTATGAATTA
TAACGTGTTCTTTGATGATATCGAGCGTGCTTTATCACTTGTNCATTTGT
TAGATAGCAAGCACATGATTTTCCGTCTAATAGTGatcatatttttgttt
tatctcACTAGCTATGTTTTTGAAGTTGGAATCGGCTCGAAAGAACGAAA
GAGACGAAGAGAACATTCCCTTAACGAGCAACAGATCGACAATACACTCG
GGGCGTGAACAATTCCCACCTCCAGCCGGGCGGAATTTATATACACCGCC
CTTAATTGTCAAAACACCGGATGAAGACTATCGAAAACAGTTCAACTCAA
CATCAGGTACGATTTATTGGCTAGTGCTAGGTCGCGGCAGCTACAAGGTT
TTACTGTAGGATTTCCATCAAGAGCAAACTGCATGTTTAGTACCTTTTCA
AGTAGCAGCTTTTCAAGTTCTGAGAGTCTGCAAAATATGAGCCAGAGTGA
AGAATCTTGCTAATGTTATCTACATTTTCACattcaaattttcctctaaG
CTGACAACGTTTTGTTAAGAACTCTAGATTTATTCTCCCTTATTCCCTCG
TGCCTCAATAATTTTGTAACCGCTGAATGATATTTCGCTAATTCTTTTAC
CTGTGACTTGTAGCAAAAGACGGTACTGATATAGGCTATCTGATGCGTTC
TCCAAAACGACAAAATGGTGGACCGTCCAATAGAAATCATCGAACCAGGG
ACCATGTTGATGCCGTCAACTTTCGAAGACGAAACAAACAAAACCAAAGA
TCCGTTCAAAACAAACGATCCGTTATTGAAGAGCCTTTCAGACGCCATAA
TTACAAAAGCCCGGCGCCTCTCGATGAAGCACGCATTTCAGTCAAGCAGC
GCACGCTTGAAGAACGCGGAGAAATCGAAGGGCATGATCTTTTGACAGGT
AAGACTTTTCAATATGTACATTTTCAACAATAGGACGAGTATCGTCAAAC
ATAGTAAGCGATCCATTGTATAGATTATGATCTTACTAAAACACTCACGA
CATAAACGACTTGAATAACTACAGTTGAAGTTGAATGAGTAAGATTATTA
TGGATAATAACGTGTTCTTTGATGATATCGAGCGTGCTTTATCACTTACT
TCTTACCAACAGGCAATCGTGGAGCATCGATGGGGATGTTGGATAGCGAT
GGGAACAGTAGCGACAATGGCGAAACTACATTACGAAAAAAGAAGAATAC
ATATATCAAGAGCAAAGAACTCATCACTTATTTTGCACAACTCGCTCGAA
GTAAGAACCCTACCGATGCAATAGATCTCAAGATGGTGGACCGTCTCATT
CGCAATGGTGCCAACCTCAACGTTACCGATAAATACGGTCAAACGGTCAT
GCATGAAGTGGCAAAGAACTGGCACACTGACGTCGCAAAATATCTCATCA
AGCGGGGCGCTATTTACGACGCCAAAGACCGTTATGGGCGGACACCCCTT
CATCTTGCATCGGCTGTGGGACATGTAGAAATGATTGATTTTTTAGTGGG
TCAAGATCACGGTaagttttatcatttttttttttttttcgataaaaATC
TTTATGACGGTTTTAAGTCCCTTACTGAAATGTATAAGGGAATTTCGCTC
AGACTTTAATGCGTTCTAATATATGTTATCCGATATTACAAATCATTTTT
GTAGAATTCGACTTTCTTTCCCTTACAGTTTTGCCTGTAGTCTATGGCCA
TAAAGATTTCAAGGGCCTGATTTGCTTAtcccctttaaaaaaattctcta
aataATACTATTTTTGAAGCTGACTATTCTTGTCTCGGTTTACTAAGGAA
TGATCCCTTACTTAATATCCTATTACGCCATTGCGAGGAAAGGTCGACCA
AAATCGTTGTATACCTTATTGATCGGGCGGTTTGTGGTGCTATCAATGGT
GCACGGGTCGCGGCTTCACTAGATCCCTACTGTTTCACAATTAAAAGAGG
ACGTATCGCACTCATTCCACTAAATGACTGTANGATCCCTACTGTTTCAC
AATTAAAAGAGGACGTATCGCACTCATTCCACTAAATGACTGTAAAAGGC
TTTGATTCGTAAACTTGAACATTTTCAGAGAAACTAAAAGACGTGACGAA
GGACGAGCGTCAGACAGCGCTTCATTACGCAGCAAAGAACAACTCAGTAG
GAGCGTTGAAAGTCCTTTTGAAGCTGGGTGCGTCGATGAACGATCGAGAC
TATCGATTACGTACTGCTCTCCATCTCGCTGCTGAAAACGGTAATATGCT
TTTTTTAGTAATAATTCTTACTTAAGAGTGATATTTGCTTGACTTCATTT
CATATAAAACTATTACAATGTCAAAAAACAAACACTTTTTACCAGTGTTT
TTGTCCGGTTGACACTTTTTCAAGAACGAAATTCAATTTAACCTTTACAT
GTCCCCtgtttttcaaatgaaaatggaGAACTAGGGGTTTTGGAAGGCTA
AAAAGAAATCGATTGAACGGAGGAGTTAAAAAATTAGCTTTGTTTTGGAA
ATGCCCCCCCACAGACTTGTAAGACAAAATTATTCTGTACTCAAATATTT
CCTTGAGATTACTGCTGCTTCTCGATTTTCAGGACGTATTGAAGCTGCGC
GATATTTATTGAGCAAGAACGCTCCATGTGCAGTGTACGATGATCAAGGT
GTTTCATGTCTCTCCATCATGGTTCAGAAGATGCCTGGTGTAGCCTTCCT
GGCCTTGCAACAATTCTACGCTGAAGATCCTGCCAATAGAAAACTATATT
GCTATTTGAATTACTTGGAGAAGAAGTTGTTAGCAGATGAGGAGTTGCAG
ATCAGTTGGAAATATTTGACCAAGATGGAACGAGAACGTCAAAAACGTGA
ATTGTCACTGAATGAGATGGTGACCAAGAAACAGATTAAGAAAGGTGAAC
TTGCCAAGTCCGTCTTGGAGGTGAGCACTCTTCTGTTAGAATATCTACCT
CGAAACTCTTCTCTTGGACATCTGAATCTTCTTGGCTAAATTcctttttt
ttggacctacctccgggtaccccggtggaggttctataaattaacccatg
tccgttcgtccgtccgtctgtccgttcgttcgtccgtccgtccgtccgtc
tgttaccagcttttctcaggattggctcattagttttttctgattttttg
cgcaatgatgcaaaatggcaatgcccagaacgtgacggagtctgattttt
gagaaaaaaattatttgggcaaatatgggccaaaaactacctaaaaatag
ggttttttggacttggaaattccctttaaccaaataagaaaatatagctt
ttctcaatgttgactcgttatttttttctggttttttacacaatgatgca
aaatggcaatgcctaaaatgtgtcggagtctgattttcgaaacaaaatat
atttggtcaaatttgggccaaaaactgcctaaaaatagggttttttggac
tttgtgcaaaatcctgtcattacttttttctgattttttgtacaaagatg
gagggcaagattctctaaagaatggctgaagtggtttttctcggaaaatt
cttattcgccttaaaagacggattttcgtatttNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
aaccaaataagaaaatatagcttttctcaatgttgactcataattttttt
ctgattttttgcacaatgatgcaaaatggcaatgcctaaaatgtgtcggg
gccgattttcgaaacaaaatatatttggtcaaatttgggccaaaaacagc
ttaaaaggttttttgggcctgaatggtttaagtgattttcgtatttgggg
aaattcctttttaccattttacattattcaaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttccattctgaatttttg
tataattattgtcacttttttcttattttcatctgatgttaatcattagg
taggtccattcagcatgttgcttgttttttcttgaattcCTCTAAATCTA
ATTTTCCCCTATTTTAAACCAAATATCTGGCTCCTTGAGGTGTGTTTCAT
GGCTGATTTCCTTGAAGGCTCAAGAGGGATTGATTCAGCTGTAAATATGT
TTGGGCACTCAGAAGTTAGACAACAACCTCGTTACGATATAGTCTCAGTC
AACATCGGAAGGATGAGAATACGCTGAGGAAACGAGGTTTAGTAGATGTG
TGTTCGGGAAAATGTCACTCTCTACCATTTATGTACTATATTGAACGCAT
CCTCTCAGGTAGGGGNTGTTCGGGAAAATGTCACTCTCTACCATTTATGT
ACTATATTAAACGCATCCTCTCAGGTAGGGAATACGATTCACTCTCCCCT
TCAAAAGATAATAACgagtttttttctttcgttCATGTTCAGAAAGTAGT
TGAGCATTGGGAAGTATCTTTAGTAGTCCATCCAGCCATTCAATTATTAA
TAAAAAAGAAGTGGATGCTGATTGGTCGAAAGGCTTCAATTTTCAGTCTC
GTTCTCAACGTCATTTACGCACTTTTATGGTCGGCAGTTGGCGTCGCAAC
GCCGGTAATGGGACCAACAATTTATCGGCCCTTTTCGCTGTGGTGGCATA
TTACAGTGCTTGAGGTGATCGGAGTTGGCTTGACCATCTATTTCATGGCT
ACTGTGAGTATATACTCTTTTAAGTTTGTCATTGAGCTCGTAcagaaaga
aatctttttacaGTATCAcagtttttccgaaaatttcataatttctgCTA
CTTTTGTTTTCCGATATTCACGAGACATGAATTTACTGATGTTGTCTTAT
GGTGtaaactaattaaatattcTATACGATTTTTCTCTCTCGATCCTTTA
CAGCACATTGTGGAGATCCAGATCGACAAGCGACGTGATAACGCTTATGG
GAAATGGGTGATCGCACAAGCAGAACGCGACCTCAAATATTGTCATCCCA
GGTGGCCTGAAGAGAGACGTCACATTGATGACACCATTGAAGCTATtgga
aatcgaaagcgaaagcgaTATTTCTCCGATGGATGGAATTGTTTTGATTG
GTTCGTTTATTTGTTGGTATGGGTCGTTATGGCAACTCGTTTATTGAACC
TCTTACTGGAGGACGATAAATTGAAATATTACCACATGCGCATCTTCTCT
CTCACACTTATCTTCATTTGGCTTCGTCTATTACGCAGACTGAAACCTTT
CCCTTACTTCGGGCCTTTCATTATCATGCTGGGCTACGTCGTTATAGATA
CCATAAAATTTCTggtcttgtttttattgatttacaTTCCGTATTGTTGC
GCTTTTTGGATGATCTTCGGCGGACCACAATTACGTCATTCCAAATCATT
TCTTCACGAGATCAATGATATGGtgtatgatatttttcaaatgtcattAG
TGGGCGAGTTCAAATGGAAAGAATTTGTGGAGATTGATGAAACATTTGCA
CAGGTATGCTGATAAAGTACTTTTTTACTACATATTTTAGGAACCAGTTC
TGTTGTGATTACCGAAGCTTTCGATAGAAATAAATAATTACAAGCCGTTT
CTTGGAGTGAAATAAACTTGTCAGTCTTAccgatttttaaaataaatgaa
atcaaCGAACAACATTTTATTTCAATCCTCTCTTAGACTTTTCACTGTCT
TCTGTTTCAGCTTTTGACGGGTTCTTACATGGGTTTGACGTCAGTGGTTG
CCATCAGTTTGTACATAGCTTTGTTGGCGACCACCTTTTCTCGGAAGTAT
CCACAAAGTGTAGCCATGGCGCTCATCATGCAAGCGGAAAGATGCGTACA
GGTGGAACGAATGATCCCTAAGAAAACACACTTGAACATGAAAGCTTTCT
TCCACGAAGACTGTGCACCTTTGGTAAGAATATCTTAGAGGAAAAGAATT
ATGACGgcaatttaatttggcagttgaaagatattttttactAGAAATCA
TTGTTGAATAAGAATTAAACTTGTTTTGACACCTGAAATAGCACGAGTAT
GGGAAAcggttgaaaaaaatctaatttggtGGACATTTAATTAAAGGATG
GTAAAAATAGGGCATTTTGAAGGGAACTTAATTTGGGGGATATTTTATCC
AATATACGGGCTTGTCTCTTTTTCTATCTGCGATCccacaacaaaaaaat
ttagtcACAAAATTTAAACAGATAGCCCCGCTGCCAATGCTTAGTTCGGA
TGTGATCAAGATTTGCTATGTTTCGCTAGATTTATATTATTTCTTAACGA
TTCTTGTCCAGGTTGAGGAAATGAAAGGTNTGTTTCGCTagatttatatt
attttttaacgATTCTTGTCCAGGTTGAGGAAATGAAAGGTGAATCAATC
TCTATAGCAACTAACAACGCGACGTTGAGCAAGTTGGATTTCAGTCGTTG
GAGAGGTCGTCATGAAAACGAAATCGATGAAGTTCGTTACAGTATGAGAG
AATTGAATAAAAAGCAAGATCGTCTCGTTCATCAGTTCAGGTTTATTCTC
GATAACCTtgacgatgatgatgatatGGTCAGTGAAATATAGACTTTTTG
GCTAAATCATCTGAAATTTGGTTTTGATAGGCGAGGTGAATCATCGTCAG
TAAAATGAGGCAATGATTTTTCCTGAATCTTTTCATGAATATGGGACGGA
CGAAGCAATGGAATCTTGAACTTTGTGATAAAGACAATATGGGAACTGGG
GTTATCCACAGACTACAGTTTGTGATAAGAAATTCTTTTGACGTAGCAGT
TATGGTGAAACTTTAAACATTTATATTTCAAGACACTATTTTTGGAACTG
AGGAGAGCATTCACAAAATAAGTGAAACCATTGAGCCCTTTTTAACGGTT
AAAATAGTTTGGTCTCTTTACTACAAATTACGTATTGTAGAAGCTATGAA
ATtcagtactctcgggtaccttatagccggggggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008357XLOC_008357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014947-exon-sc0000201-1491911889:371108..371258TCONS_00014947-exon-sc0000201-1491911889:371108..371258Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:371108..371258TCONS_00014947-exon-sc0000201-1510915933:371108..371258Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:371108..371258TCONS_00014947-exon-sc0000201-1575043694:371108..371258Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:371776..371828TCONS_00014947-exon-sc0000201-1491911889:371776..371828Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:371776..371828TCONS_00014947-exon-sc0000201-1510915933:371776..371828Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:371776..371828TCONS_00014947-exon-sc0000201-1575043694:371776..371828Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:373422..373563TCONS_00014947-exon-sc0000201-1491911889:373422..373563Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:373422..373563TCONS_00014947-exon-sc0000201-1510915933:373422..373563Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:373422..373563TCONS_00014947-exon-sc0000201-1575043694:373422..373563Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:373871..374155TCONS_00014947-exon-sc0000201-1491911889:373871..374155Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:373871..374155TCONS_00014947-exon-sc0000201-1510915933:373871..374155Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:373871..374155TCONS_00014947-exon-sc0000201-1575043694:373871..374155Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:374370..374768TCONS_00014947-exon-sc0000201-1491911889:374370..374768Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:374370..374768TCONS_00014947-exon-sc0000201-1510915933:374370..374768Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:374370..374768TCONS_00014947-exon-sc0000201-1575043694:374370..374768Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:375336..375497TCONS_00014947-exon-sc0000201-1491911889:375336..375497Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:375336..375497TCONS_00014947-exon-sc0000201-1510915933:375336..375497Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:375336..375497TCONS_00014947-exon-sc0000201-1575043694:375336..375497Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:375840..376177TCONS_00014947-exon-sc0000201-1491911889:375840..376177Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:375840..376177TCONS_00014947-exon-sc0000201-1510915933:375840..376177Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:375840..376177TCONS_00014947-exon-sc0000201-1575043694:375840..376177Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:378850..379110TCONS_00014947-exon-sc0000201-1491911889:378850..379110Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:378850..379110TCONS_00014947-exon-sc0000201-1510915933:378850..379110Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:378850..379110TCONS_00014947-exon-sc0000201-1575043694:378850..379110Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:379311..379910TCONS_00014947-exon-sc0000201-1491911889:379311..379910Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:379311..379910TCONS_00014947-exon-sc0000201-1510915933:379311..379910Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:379311..379910TCONS_00014947-exon-sc0000201-1575043694:379311..379910Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:380118..380330TCONS_00014947-exon-sc0000201-1491911889:380118..380330Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:380118..380330TCONS_00014947-exon-sc0000201-1510915933:380118..380330Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:380118..380330TCONS_00014947-exon-sc0000201-1575043694:380118..380330Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1491911889:380781..381394TCONS_00014947-exon-sc0000201-1491911889:380781..381394Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1510915933:380781..381394TCONS_00014947-exon-sc0000201-1510915933:380781..381394Clytia hemisphaericaexon
TCONS_00014947-exon-sc0000201-1575043694:380781..381394TCONS_00014947-exon-sc0000201-1575043694:380781..381394Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:371108..381394 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.119443	0	0	0	0	0	0	0	0.208812	1.51707	0.734316	0.00132745	0	0	0	0	0	0.000434523	1.43449e-10	2.22959	1.41455e-06	0	0.525831	0.0210266	0	5.59303e-10	0	0	0
Blast
[Close]
BLAST of TCONS_00014947 vs. Swiss-Prot (Human)
Match: ANK2 (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4)

HSP 1 Score: 92.8189 bits (229), Expect = 9.531e-19
Identity = 65/215 (30.23%), Postives = 109/215 (50.70%), Query Frame = 1 
Query:  796 LKMVDRLIRNGANLNVTDKYGQTVMHEVAKNWHTDVAKYLIKRGAIYDAKDRYGRTPLHLASAVGHVEMIDFLVGQDHEKLKDVTKDERQTALHYAAKNNSVGALKVLLKLGASMNDRDYRLRTALHLAAENGRIEAARYLLSKNAPCAVYDDQGVSCLSIMV----QKMPGVAFLALQQFYAEDPANRKLYCYLNYLEKKLLADEELQISWKYL 1428
            L +V  L++NGA+ +VT+  G+T +H  A+    +V + L++ GA+ DA+ R  +TPLH+AS +G  E++  L+   H    D       T LH +A+   V    VLL+ GA+ +    +  T LH+AA+ G ++ A+ LL + A        G++ L +      QK   VA L L++  +     +  Y  L+   KK     ++QI+   L
Sbjct:  444 LNIVLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLL--QHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQK---VALLLLEKGASPHATAKNGYTPLHIAAKK----NQMQIASTLL 649
The following BLAST results are available for this feature:
BLAST of TCONS_00014947 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANK29.531e-1930.23Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4[more]
back to top