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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00014943-protein ID=TCONS_00014943-protein|Name=TCONS_00014943-protein|organism=Clytia hemisphaerica|type=polypeptide|length=889bp
MFLKLESARKNEKDEENIPLTSNRSTIHSGREQFPPPAGRNLYTPPLIVK
TPDEDYRKQFNSTSAKDGTDIGYLMRSPKRQNGGPSNRNHRTRDHVDAVN
FRRRNKQNQRSVQNKRSVIEEPFRRHNYKSPAPLDEARISVKQRTLEERG
EIEGHDLLTGNRGASMGMLDSDGNSSDNGETTLRKKKNTYIKSKELITYF
AQLARSKNPTDAIDLKMVDRLIRNGANLNVTDKYGQTVMHEVAKNWHTDV
AKYLIKRGAIYDAKDRYGRTPLHLASAVGHVEMIDFLVGQDHEKLKDVTK
DERQTALHYAAKNNSVGALKVLLKLGASMNDRDYRLRTALHLAAENGRIE
AARYLLSKNAPCAVYDDQGVSCLSIMVQKMPGVAFLALQQFYAEDPANRK
LYCYLNYLEKKLLADEELQISWKYLTKMERERQKRELSLNEMVTKKQIKK
GELAKSVLEKVVEHWEVSLVVHPAIQLLIKKKWMLIGRKASIFSLVLNVI
YALLWSAVGVATPVMGPTIYRPFSLWWHITVLEVIGVGLTIYFMATHIVE
IQIDKRRDNAYGKWVIAQAERDLKYCHPRWPEERRHIDDTIEAIGNRKRK
RYFSDGWNCFDWFVYLLVWVVMATRLLNLLLEDDKLKYYHMRIFSLTLIF
IWLRLLRRLKPFPYFGPFIIMLGYVVIDTIKFLVLFLLIYIPYCCAFWMI
FGGPQLRHSKSFLHEINDMVYDIFQMSLVGEFKWKEFVEIDETFAQLLTG
SYMGLTSVVAISLYIALLATTFSRKYPQSVAMALIMQAERCVQVERMIPK
KTHLNMKAFFHEDCAPLVEEMKGESISIATNNATLSKLDFSRWRGRHENE
IDEVRYSMRELNKKQDRLVHQFRFILDNLDDDDDMVSEI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0005216 | ion channel activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
| GO:0006811 | ion transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006811 |
ion transport |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0005216 |
ion channel activity |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 844..864 |
| None | No IPR available | GENE3D | 1.10.287.70 | | coord: 456..777
e-value: 3.6E-9
score: 35.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..98 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 229..356
e-value: 3.58758E-34
score: 127.115 |
| IPR002110 | Ankyrin repeat | PRINTS | PR01415 | ANKYRIN | coord: 318..332
score: 31.89
coord: 268..283
score: 44.52 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 302..331
e-value: 3.3E-4
score: 30.0
coord: 335..364
e-value: 0.001
score: 28.4
coord: 267..296
e-value: 0.019
score: 24.1
coord: 234..263
e-value: 3.7
score: 16.5
coord: 195..230
e-value: 1200.0
score: 4.5 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 335..367
score: 10.205 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 267..288
score: 10.286 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 234..266
score: 10.446 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 302..334
score: 11.915 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 161..275
e-value: 4.6E-21
score: 74.2 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 299..361
e-value: 2.9E-11
score: 43.7
coord: 216..289
e-value: 3.7E-12
score: 46.6 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 276..452
e-value: 1.9E-28
score: 98.5 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 214..373
score: 41.752 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 215..375 |
| IPR005821 | Ion transport domain | PFAM | PF00520 | Ion_trans | coord: 597..775
e-value: 4.1E-12
score: 45.7 |
Blast
BLAST of TCONS_00014943-protein vs. Swiss-Prot (Human)
Match: ANK2 (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4) HSP 1 Score: 91.6633 bits (226), Expect = 1.127e-18 Identity = 65/215 (30.23%), Postives = 109/215 (50.70%), Query Frame = 0
Query: 215 LKMVDRLIRNGANLNVTDKYGQTVMHEVAKNWHTDVAKYLIKRGAIYDAKDRYGRTPLHLASAVGHVEMIDFLVGQDHEKLKDVTKDERQTALHYAAKNNSVGALKVLLKLGASMNDRDYRLRTALHLAAENGRIEAARYLLSKNAPCAVYDDQGVSCLSIMV----QKMPGVAFLALQQFYAEDPANRKLYCYLNYLEKKLLADEELQISWKYL 425
L +V L++NGA+ +VT+ G+T +H A+ +V + L++ GA+ DA+ R +TPLH+AS +G E++ L+ H D T LH +A+ V VLL+ GA+ + + T LH+AA+ G ++ A+ LL + A G++ L + QK VA L L++ + + Y L+ KK ++QI+ L
Sbjct: 444 LNIVLLLLQNGASPDVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQTPLHIASRLGKTEIVQLLL--QHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQK---VALLLLEKGASPHATAKNGYTPLHIAAKK----NQMQIASTLL 649
The following BLAST results are available for this feature:
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