XLOC_007259 (gene) - C. hemisphaerica

Overview
NameXLOC_007259
Unique NameXLOC_007259
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000157:302664..306323-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007259 ID=XLOC_007259|Name=XLOC_007259|organism=Clytia hemisphaerica|type=gene|length=3660bp|location=Sequence derived from alignment at sc0000157:302664..306323- (Clytia hemisphaerica)
ATACTTATTGGGGCAACGGCTATCCTTTACCATAGTTTGATATCTAAAAA
GAACTTTTCCTTTTAAAAGATTAGTGAAACATTTTGGTTGTTTTTAGGGC
ACAAACCTCAGCAAAAATGACGGTTCTTATAAACAAAAGTATGCTTAATC
AAAATCAACAACAAATATGCATTACTTTATATGATTACTAATACCAAATG
TCAATATAAACAACAAAAACAAATCATATACCCTTAACCTTGTCTCTGTT
AGTGTAGTCAGTACAAAGTACTATCGAACGATGACGTCATTTCACTTAGT
TTGCATCATCTTAACATACAACATGGTTTATTTGTACATATGCCAGAATA
ACTGATTATGTTTGTCTTCTGGCCTTCAGGCCTTCGTTCATTTCGATATT
TTATATAAATAATATTCTATGATACGGTAAGTTGGTCTCATGTCGACATC
CCTTTTCTAATTCCGACACCCTTCTTTATTAGAGGTAGGAATAATATGAA
GGTCAGAATCACCAATAGAGAAAAGTTTTTTTCCTCTCTGATTGCTAAGC
AATAAAAATTAGCTTAAATCAGCTATTCTGACCTTCCTATTATTCTTATC
TGCAAATAAGGGTGTCGAAATTAGAAGAGGGATGTCGACATTAAACCAAC
TTACGGTAATCGATCTGTTTTTATCAAGTCCAACGAAAAGAATATCCGAA
TATTCGTTTGTCTGTTCCGATTATTCTTGCTTATTTACTATATAAACGTT
CGAATCGAATTACTCAATTGCATTACGTAACCTCAAATAATGTCGTGAAA
TAGCTTATCACTACAAAGTTTGACATCTTTTCCCGAACTAAGAAATTTAA
AATCGAACTACAAAATGTAGCAAATTTCGAAATAGTCACTGTATTACAGT
AAATGATTTTCACAAGGACTTTGTCATATCATAAAATTGTATCCAACATC
CTTTAACATCAAGTCAAGAAAGTAAATTTACTTTTTTGACCACCATTTTC
CTCAATCCATAGTTCATCACTACTGGTTAACGGTGTTGGTAAAGTTTCAA
ATTTACCAGTAGCGGTTGCGGTTACAACCAGTTGTCTGGGCCTGGAGATG
TTGTTATTGTTGTTGATGTTTGGGTTTAACTTGCCAACTGTGGGTGGACT
TTTTCTCTTAGTACATGGATCATCGAGGACGGTGGCAACACTACTGCGAC
GTCGCTGGGTCATGGTCGACGACATGGTTGCCGAATACGCGCTACGTTTA
CGCCAGTTATGACCAGTAAAGAAATTGCGGACATCTTTACGCCATCGGGC
ATCGATTAAGCTGTACACAAGTGGGTTGATGGAAACGTGAAATGGATAAG
TGAAGTGGGCAATGTATACCAGAATCACGAAAGTGGAGGCTTTCATGTCT
CGTTGATTCGCGAAAGAGCCCCATCCATAATCATTATAGCTTAAAAATGT
CATTATGACTTGTTTAGGGAAAACAAAAATGACAAAAGCGATCACAACAC
CGATCAGGACATACATGGTGCGGCGGTTGTCTTGGAGACGCTTTTTCCGT
AAACGGGGGTCAGCGATGAAAGAATTTTTACCAAGAACAATGGTTCCATG
TAATGTGGATATGATTAATGAATACAGCGTGGCGATGATGATTGTTGGGA
TCAGAAGATATACGATCAGGACAAACATATTGTATATGAACATGTCCTGG
CTTCCATTCGGCCAATCGACTTCACAGATTCCAAGGTCGGTAATGCTGCT
GTAATAAAAGATCGGGATACACGCCATTAATCCACACAAGCCGTTTATAA
ACAGAATGACATTCAAACCCGTCTTGGAGATTCCTCGGCTAAACGGATTA
ACGATTCCGATAAAACGTTCAATACTGATGGTCAAGATAACACCAATAGC
TAGATAGACACCAAGGTATTCTGCACCTCGCAACACTCTGCATACGAATT
TACCATATATGAATTTGGCTACCCAGAACTTTGGTAAAGCGTAGGTGAAC
TGGAAGATAGCGAAAAACAGGTCGTAAAGAGCCAAGTGAGCGATCAACAT
TTTGCATGGAGCTAAACCGATTCGGAATCGAACGGCAACTGCGATGACGA
TTAGATTCCCGATAATCCCGATAACTGAAGCAACGGTCTCTACTGTCGCG
TAGGGTAGAAGAAAATATGCTGCCTGTATCAAATTTTGAACTGGTTTCGG
TTGGAGAAAATCACAAACGGATTGCTTCGTTGTGTTATCACTAAGGTTAA
AAAGCTTACAATCACAATCGTCTAAAGTTTTGTTAATGAGTGCGCAAAGT
GCTTCGAAACCAGCTACAAAGCTCTCGTCCGGTTTAGTTTCTTGACAAAA
ATCCATTGCAAAGGTACCATTAGTGATTTCAAAATTATCACAACTGCATT
CATTTTCGCCAGTCTGTNCTAAACGGATTAACGATTCCGATAAAACGTTC
AATACTGATGGTCAAGATAACACCAATAGCTAGATAGACACCAAGGTATT
CTGCACCTCGTAACACTCTGCATACGAATTTACCATATATGAATTTGGCT
ACCCAGAATTTTGGCAAAGCGTAGGTGAACTGGAAGATAGCGAAAAACAG
GTCGTAAAGAGCCAAGTGAGCGATCAACATTTTGCATGGAGCTAAACCGA
TTCGGAATCGAACGGCAACTGCGATGACGATTAGATTCCCGATAATCCCG
ATAACTGAAGCAACGGTCTCTACTGTCGCGTAGGGTAGAAGAAAATATGC
TGCCTGTATCAAATTTTGAACTGGTTTCGGTTGGAGAAAATCACAAACGG
ATTGCTTCGTTGTGTTATCACTAAGGTTAAAAAGCTTACAATCACAATCG
TCTAAAGTTTTGTTAATGAGTGCGCAAAGTGCTTCGAAACCAGCTACAAA
GCTCTCGTCCGGTTTAGTTTCTTGACAAAAATCCATTGCAAAGGTACCAT
TAGTGATTTCAAAATTATCACAACTGCATTCATTTTCGCCAGTCTGCTTA
AAATAGAGACAGGAACGTTGTAACAGTGTCTTAAACTTACAGTCAACCTC
CTTAATCTTTAATGACGTGTATTCAGACTGGTCATTGTTGGTGGTCTTAT
CAATGAGAGCAAAATCGACCAATCTACCATCTTTGATGATTTGAAACATA
TCTGGCTTACATTCTTCAAACTTGTCAGTGGTGCCGAATGCCTTACATGT
GTCAAATAAGTCCTGCTCTTGGGGGGTTCGTTTCCGTATGCATTCTTCGT
GGAAATTGACGTTGACAGAATCGGATTGACACCAGATGCCCTGGTCAAGT
TCTCCTTTATTGAATGAGTCAGGAATTTTTTCATCTGGTCCACCAAGAGA
AACTATCGCGAAATAACAGCTAGGAGTGAGTGTCTTCAACTCTTTTGAGA
TATTATTGGCAAGTCCAAGTTTAGTACATTCTGAAGTAAAACCACCAGGT
AAAACTATGTCAGCACTTTTCTTACACCATGATGCCATTTTTGGGCAATA
GAAATCACCAGACCCTTTCAGATCCAAAGTGTTGATAGAATGTTGTATTG
CCAAGATAAGGATGAAGTTAAAAACAATTCCAAAATTGCAAGCCATAACT
TTCGACTGATGAATCTTTCAAGGAGTTTTTCTTGTATTGTTCGGTTCAAC
TTCTGAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012930TCONS_00012930Clytia hemisphaericatranscript
TCONS_00012929TCONS_00012929Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012929-proteinTCONS_00012929-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000157supercontigsc0000157:302664..306323 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.12	0.29	0.22	0.34	0.2	0.16	0.09	0.05	0.09	0.05	0.1	1.26	1.1	0.04	0.06	0.39	0.69	10.47	6.37	1.34	1.79	1.16	1.05	1.63	0.67	0.2	0.18	1.12	0.79