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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035782 ID=TCONS_00035782|Name=TCONS_00035782|organism=Clytia hemisphaerica|type=transcript|length=894bp
GTAAGCCCTAATCAAGGCACGCTCTTGTTCTGCCGTTTCatatacaagtt
ttttttataataacatccaagtttttgaagccttatgttcttaacttttt
gagtcctaaagcctgaaaatgttttcaattgttcttattttcaccatttt
tctaaggaaaagggtgttttagagtctgcaaagccttaaaatgttctttg
ttcttaatattttttgcTATTAAAGCTTTTATGTGCTTgtttagcttgtt
cttataaaggaaACGTGCACAATGCAATTTCGTAATTGCCGTGTGAGCAT
TTGTGTGATGAGTGGCGAAGGGCCTTGTATATTCATTGCTTTTATAATTT
GTTGAATGTTTTAGGAATACAATTGTCAGCGAATGGGTTTTAGAACTCTC
TGTCTTTTAAACGGGttcattttttaattcatttcaatttaatgttcaaa
gtttgattgattAAACAGGTAGGTTCataaagttttatttaattattagT
AAAAGTAAACTTAGCTCACATCACCTTATCCGGAAATCTATAGTTGTAAT
AAAGTCCTATTCGTTCCTATAATTTATGATCTAGCTTTGACTTTGAGCTT
GGCTTtctaggagaaaaaaatcacaaaaattgcCGGTTCTAAATCGAATC
TAGAATGGTAGGTGTTGATATCTGCCAAGTATTTGTTTTTTACTTCTATC
GTCTACTTATTAAGGTGAAATCATCTTTAGTTTGTTTTAGGAGGAAGTCT
ATGCGCGAGTAAATTCAACAGTTGATGGTGGCATCTTAATACAATCTTCC
CTTGAAGAGATTTTCGGTCAAGGAACAGATGGGATTGTCATCAGAACAGA
TAGCGAAATGATTCCAATCAATTTGTGCAACTTTGTGTCTTGCT Run BLAST on NCBI transcript from alignment at sc0001362:51786..53086- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035782 ID=TCONS_00035782|Name=TCONS_00035782|organism=Clytia hemisphaerica|type=transcript|length=1301bp|location=Sequence derived from alignment at sc0001362:51786..53086- (Clytia hemisphaerica)
GTAAGCCCTAATCAAGGCACGCTCTTGTTCTGCCGTTTCATATACAAGTT
TTTTTTATAATAACATCCAAGTTTTTGAAGCCTTATGTTCTTAACTTTTT
GAGTCCTAAAGCCTGAAAATGTTTTCAATTGTTCTTATTTTCACCATTTT
TCTAAGGAAAAGGGTGTTTTAGAGTCTGCAAAGCCTTAAAATGTTCTTTG
TTCTTAATATTTTTTGCTATTAAAGCTTTTATGTGCTTGTTTAGCTTGTT
CTTATAAAGGAAACGTGCACAATGCAATTTCGTAATTGCCGTGTGAGCAT
TTGTGTGATGAGTGGCGAAGGGCCTTGTATATTCATTGCTTTTATAATTT
GTTGAATGTTTTAGGAATACAATTGTCAGCGAATGGGTTTTAGAACTCTC
TGTCTTTTAAACGGGTTCATTTTTTAATTCATTTCAATTTAATGTTCAAA
GTTTGATTGATTAAACAGGTAGGTTCATAAAGTTTTATTTAATTATTAGT
AAAAGTAAACTTAGCTCACATCACCTTATCCGGAAATCTATAGTTGTAAT
AAAGTCCTATTCGTTCCTATAATTTATGATCTAGCTTTGACTTTGAGCTT
GGCTTTCTAGGAGAAAAAAATCACAAAAATTGCCGGTTCTAAATCGAATC
TAGAATGGTAGGTGTTGATATCTGCCAAGTATTTGTTTTTTACTTCTATC
GTCTACTTATTAAGGTGAAATCATCTTTAGTTTGTTTTAGGAGGAAGTCT
ATGCGCGAGTAAATTCAACAGTTGATGGTGGCATCTTAATACAATGTAGG
TGTTATTTACTTTTGGAAATCTTATTTTGGAAAATAGTGTTCGTGATGAA
CAAACGGGATGTACTCTTTCGCGTCTGCTTTCCATCAGGATATTTGCAAA
TATCTGACGACCTGCTTTTGACAGAACCCTCTAATATTAACGACTCCTAT
ATATGCTGACCACAAGATTTGGACGTGTTATGGAATAGCCTGACATAATA
TCGCTACTAATTTTATTTTTCCTACTTATTCCTTCAGCTTCCCTTGAAGA
GATTTTCGGTCAAGGAACAGATGGGATTGTCATCAGAACAGATAGCGAAA
TGATTCCAATCAATTTGGTGAGCAATTTTTTTGCACGTTTGGACTAAAAA
TCTTATATCCAAATAAGTTAGATCTCTTTGACAAAATTATACACCATGAT
ATCAGTTGAGCAGTATGTTCGATTTGAACATCATGAGTCAGCTTTCCTAT
TATGTACATAGCAAATTGTTATTATGATTTAGTGCAACTTTGTGTCTTGC
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035782-exon-sc0001362-1575043694:52292..53086 | TCONS_00035782-exon-sc0001362-1575043694:52292..53086 | Clytia hemisphaerica | exon |
| TCONS_00035782-exon-sc0001362-1575043694:51970..52049 | TCONS_00035782-exon-sc0001362-1575043694:51970..52049 | Clytia hemisphaerica | exon |
| TCONS_00035782-exon-sc0001362-1575043694:51786..51804 | TCONS_00035782-exon-sc0001362-1575043694:51786..51804 | Clytia hemisphaerica | exon |
| TCONS_00035782-exon-sc0001362-1510915933:52292..53086 | TCONS_00035782-exon-sc0001362-1510915933:52292..53086 | Clytia hemisphaerica | exon |
| TCONS_00035782-exon-sc0001362-1510915933:51970..52049 | TCONS_00035782-exon-sc0001362-1510915933:51970..52049 | Clytia hemisphaerica | exon |
| TCONS_00035782-exon-sc0001362-1510915933:51786..51804 | TCONS_00035782-exon-sc0001362-1510915933:51786..51804 | Clytia hemisphaerica | exon |
| TCONS_00035782-exon-sc0001362-1491911889:52292..53086 | TCONS_00035782-exon-sc0001362-1491911889:52292..53086 | Clytia hemisphaerica | exon |
| TCONS_00035782-exon-sc0001362-1491911889:51970..52049 | TCONS_00035782-exon-sc0001362-1491911889:51970..52049 | Clytia hemisphaerica | exon |
| TCONS_00035782-exon-sc0001362-1491911889:51786..51804 | TCONS_00035782-exon-sc0001362-1491911889:51786..51804 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001362 | supercontig | sc0001362:51786..53086 - |
Blast
The following BLAST results are available for this feature:
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