TCONS_00028772 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028772
Unique NameTCONS_00028772
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2632

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028772 ID=TCONS_00028772|Name=TCONS_00028772|organism=Clytia hemisphaerica|type=transcript|length=2632bp
CTTGTTCGTTTTCATATTATATTACGGTAGTCTGGGGCCGAAGTTTGTAa
cactgtttttgtttttttggaaatctcccaGAATGCAAccgttttttttg
aattctgtaAAAAAGCACCATTGGCTCGCTTCAGTTCCCGAGTGTCTGCG
TTCCGAATTTCTCCGAGGCTCATGTCAAAGATTTCAGAAACAGTATGTCT
GACTGTGCGAGGCGCACGAAGAAGACAAGGGAAGAAAGTCAAAATTTGTA
TTGGCATTCATGCCTCCCACTGCCAAAGAAGTGAAAGCCCGTTTGAAGAA
AGCAATTGACGAAGAAGGAAATGTGTTGAACATAGAAGCTGTAAACGAAA
TGACTTCCTGGCTAGAGAAAATAACTATCACTGCAGAGGTTTTGCAGGAA
ACTGGGATTGGTCTAAAGATGAACAACTTACGCAAGAAAGTGAAAAACAA
TGAGCTAGCAAAACGTATAAAAACATTAATTCGCAAGTGGAAGGAAGATC
TTGAAAAACTAAAAACCAATAATGGGCTTGATACAACTCAGGGGAAACAA
AACTCTAAACAAAATAATCCAATAGGTGTAAAACGTAAATTTAATAATAC
AGAAGATGTAAAATTGAGGACTAGTTCACCGAAGGTTCATTCTCCAAGTT
TAGCACAACGAAAACATCAATCCTCACCTAATAGAAATCACACACGCTCT
CCTCACCCTTCGACGTCGTCCCCTCGTGTTTCAACATCACAGAGCGCCAA
CAGAATCTCGTCACCTTCTACTTTATCACCAAAACGTAGTAACAGCCGAC
CAGCCTCTCGTAATAACGTATCCAGTCCTCTGAGTAAGAAACATGCAAGA
AATACACCAAGTCCGTTGGTTACTAATCACACTAATACAAAAGAAACTAT
ACCAGattcaaggaacaataattGTAGTCTTAATAACCAAAACAATAAAA
CGAAAGCTAATAATGAGAATGGTGTTCACGACATTGATAAGAAAAACAGT
ATTGAAGTAGCAAAAGAACAATTTGATTTAAATAATAAGGATACAGATAC
TCGCATTCAAGAGGACAGGATATCTTCTATAGATTCTGGATATCAGGGAA
CATTGAGCGATGAATTTTCACCCACTGAACTATCACCAGCTGATAAATTT
GTACCGATCGATAAACCTCCAGAGATTTTACATAGCCCACCGCCTCCAAG
CCCAAGCTCTTTTGAAGCAATTGAGGAGGAAAATTTAGAAGTGAATCGTA
AGGATTATGTAGATAATCCGACTTCACCAAGTGTTGTAGCCGATGGTGTA
AATGGGTTATATGATGACAGTGATAATTTTTGTACTTGGACGGATGAAGT
TAACCACGGGGAATTTGCAGTATTGCCATATGTCATTCTTGACTAAGAGA
GATTCTTAACCTTTTGTTACTGTTTCTACTACTTCAGACCTTGTCTCCAC
CAGATGATGAGTTTGTCACATTATTTGTCTTAAAAAAAGCAACCAGACTG
GATTATTCATGATTTTTATGATCTGATCATATTCTACATCGAATTGTCTC
AACTGCTGGAAATTACACTAATTTTGTTCATGTTTGAATGTGGaaatttt
gccttttttgaagAGGAGTACTTGGGCAAATGCGAAATCGGGAGaatcag
tttttttatttaaactttcgttttttttggaacttttggaaattttttaa
caatgaTATCAACTATGGTTACACACAAAGTCACTACAGTTTTATGACGA
AAACTTCCGAAATCGTTGCTTCAAAGCTTTCCACAGGAAACTCAGaacgt
ttttaaaatttttggtttaCAGTAACCAaagtccgtataaaaaaaccggt
ctggaagccttttgtttctttccattgctTCTTACTTTAAAAACTTGcgt
ttgagaaattagtttgttttgctcgctTTTTGATTATGTGATTAAATCTC
AAACCAATTCCAAGAGGAACAccggtaacgtgatcaaaaactgtgcaaat
cgatttttatcttttgatattaacaaaggaaaagctaacaaaaagttaaa
acaataagcttctaGACCAGAGTTTTCCTTTGTGTTTTGTATAGCCGCAA
GTTTATACATCTCTATTTTTCACTGTTGAAAATGGATAAAATCTTTGGTT
AAAGGGATAAACGGATGGCTCTAGATGGTTTGAGATCTTTGACCTGTAGA
ATGCTTTCTGAGCAAAACTCCCATAAATCTTTACGTCAAACTATTAGTCT
ATTCTTTAAACGACTTTTAGATTTCAGCTAGAAAACTTTCCCCTGAAGAA
TCCTGTGAGTGATGTATTAAGAGATTTCTTGTCATGTCGCAGCTGAGGAA
AGAATGGAGGTCAACATATTTAGAGGTTTTCTCTCAGGACTAGAAAAGGT
TTCTTTAGGCTAAAATGATCTCAAACCACCCAATTATGTCCTTTTATCTC
TTTATCTTGCAACGTGAAATTTCACCATATTATATGACTACTTTTCGTTT
TGTGGAAACAGGGTCCAGTAGAACTAATttttaaacagaaagaaaacaaa
tgaatcattttgaaagcaaaattaataTTTGGATGCCTCAATTCTTTCCA
GGGATCTATCACCTTCAGAACAGTTTTCGAAA
Run BLAST on NCBI

protein sequence of TCONS_00028772-protein

>TCONS_00028772-protein ID=TCONS_00028772-protein|Name=TCONS_00028772-protein|organism=Clytia hemisphaerica|type=polypeptide|length=378bp
MPPTAKEVKARLKKAIDEEGNVLNIEAVNEMTSWLEKITITAEVLQETGI
GLKMNNLRKKVKNNELAKRIKTLIRKWKEDLEKLKTNNGLDTTQGKQNSK
QNNPIGVKRKFNNTEDVKLRTSSPKVHSPSLAQRKHQSSPNRNHTRSPHP
STSSPRVSTSQSANRISSPSTLSPKRSNSRPASRNNVSSPLSKKHARNTP
SPLVTNHTNTKETIPDSRNNNCSLNNQNNKTKANNENGVHDIDKKNSIEV
AKEQFDLNNKDTDTRIQEDRISSIDSGYQGTLSDEFSPTELSPADKFVPI
DKPPEILHSPPPPSPSSFEAIEEENLEVNRKDYVDNPTSPSVVADGVNGL
YDDSDNFCTWTDEVNHGEFAVLPYVILD
Run BLAST on NCBI

transcript from alignment at sc0000703:108994..116634-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028772 ID=TCONS_00028772|Name=TCONS_00028772|organism=Clytia hemisphaerica|type=transcript|length=7641bp|location=Sequence derived from alignment at sc0000703:108994..116634- (Clytia hemisphaerica)
CTTGTTCGTTTTCATATTATATTACGGTAGTCTGGGGCCGAAGTTTGTAA CACTGTTTTTGTTTTTTTGGAAATCTCCCAGAATGCAACCGTTTTTTTTG AATTCTGTAAAAAAGCACCATTGGCTCGCTTCAGTTCCCGAGTGTCTGCG TTCCGAATTTCTCCGAGGCTCATGTCAAAGATTTCAGAAACAGTATGTCT GACTGTGCGAGGCGCACGAAGAAGACAAGGGAAGAAAGTCAAAATTTGTA TTGGCATTCATGCCTCCCACTGCCAAAGAAGTGAAAGCCCGTTTGAAGAA AGCAATTGACGAAGAAGGAAATGTAATGTTTATGTACTTTTTGTTCTGAA TACTTACCTAGCTTCCTCTCAATTTGAAATTTTTCAAACACCTCAAAATT AGCACTTTGAAAATGGCCGCCATTTTGGATTTTACTTAACCCTTAATGTT CAACTTTCCTCACTTCAGGTGTTGAACATAGAAGCTGTAAACGAAATGAC TTCCTGGCTAGAGAAAATAACTATCACTGCAGAGGTTTTGCAGGTAAACA TCTCTAGTTATTTCAACTTTTACAGAAAAACTTAACTTTTTTTGAGTTAT ATAAATGTTACATTGACTTTAGGATTTTTTTTTTCCATTCACTTTCAATA ATAAGGAACACCATTACTTCCAATATGCCAAGCAGTTGTGCTCGATGGGA ACCATCATCAGGGCAGATCAATAAACATCAATGTCTTATTAGATTCAATA TAAGTAATAGACTTTTTGCTAAGGCTTTAGAAAAAATAAAAAATCTCATA TTAGAATCAATAAGCAATAGAACTTTTGCTAAAGCAATGTCATGTCGGAT AATTAAAAACTCTAGCACAAATCAAATATTGTCTTTTTCTCGGTAGTAAT AAGGGTTTTGTTTCAAATAGCCATCTACGTTAAGTGGATAGGACCTTTTA CTAAGGTGCGATGTGATGTTGAAGTATAGATCTTTTGGGTTTTTGCTCTC CATATTGAATTTTATGCAAAAATTATGGCTGAATTGCCGTGATAAGATTT AATAAGAAAATATGCAAAACCTATGCAAAAAGATAATTGACGTTATTAAT ATTCGGGTGTAAAAGGATGAAGTGACAGCCAAATAGCGTTAACTCTTTGT ATAAAATTCATGGGAAATGCATGTTTGGACTTTGTACCCAATGCTGCACG CAAGCACTTGAGCTAAAGTCCCGCTAGCAGGACAAAAATCAGTTTTTTGA AGTTTGTGAAAAACGAGCAGTAAAAAATACAACTTTTCTATTTTTCCTTT TTTTTGCAGAACTTCCAGAAATGAAAATCAAGGGATAATGATAATTGAAT ACTATCCACTGATGATCTGCGGCACTATCTATCTATCTATCTATATATTT CGTACTAAAAGTTACTTGGTCCCATTATCCGTACATTTGAGCAAAGCTAA AATTGCTTTGCGTACTCTGTGCTTGAGAAAATGATTGACAGATTAAAGTT TATCACCCGTGCGGGAGCTTGCGGGTGTTCTGTGAGCATTCTTGGCTCAA CCTTCGTAACGTGCTAAAATGGTAGAACTTCGCTACAGCAGATCATTTAG ATGGAAGTTGTTGGAATGTTTACAAGGCTCTTTGTTTGTTTGATTGTCAA TGATGAGATGACAGTGCTGTTATTAATTTTGTAAGATCTGAAAAATTGTG TGTTAGTGCACTTTATAGTTTTGATTTCTAATGAAGAATCTTATTCAGGT TTTCATGTTACTAGATGCTGTTTTAGAGCTTTAGATCAGAGTGTTGGTAG TGTCTTCCTATTGAGTCAGATAAATTAAAGCTACTTATTTACACAACAAT ATCCTCCAAACCAGTGAAAGATCAAAGGCTGTTTCGAGATGTGGCCACAT TCTATTGCTTTTGTAAACAAAAAAATTTGATTTTGAACAAATTTTCAATC GAATGTTTTGGTTATAGAATAGAAAACTTAAAAGAGGCCTTGTGGTATAG TGGACATCAACCTTGATTCCTGTACAGGCGACAATGGTTCGATTCCCACT CACAACGGTTCACTTGGCAAGTGAACAAACCTTCGCCCGGGTCAACCCAT GCCATGTGAGGGGAATTGGGTAGTCAGTTCACGATGCTTACTCAAAGCAT CTATAGTTGCGAGAATGAGCTCCCAGAGCCTCCTGTAACTCAACCATAAT AGAATAGAGAGGAGTTCTATTTATTATAAAAACATTCAAAGGAGTATCAG TAAAAATCCCTTTGTTTGAGGAATGTTTTTTTATTCAATGATACTTACTT TTTGATACTTTTTGAAGGCTTCTTTGCTCGTCTCAACAATCGTCCAATTT GAGAAATCCGATGATGGACCATGACTTTGATGCTATTTGAATCAGCTCTC CTAAGAGAAAAGTAATTCGGCAGCAGTGGCTCATCCAGTAGTGAATTGAG AAAATGGTCCAATTGATGTTTAAAATTAGTTTTGGAGCAGTTTTTGAGGT TACGGATGGATTGTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGC ATTAAATAGTCTGGGACCTTCTTCTGACAGGGAGTCTCTCCATATGTTTT TTTGCCTTATGTTCACCTCTTTTAGATAACATTTTCTACCCAGTCTATGG TTATCANNNTTTCTCTGCGCCGCTCCAGGCTGTATAGTTTAAGTTCTTTG AGCTTCTCCCAATAGTTGAGATGTTGAAGTGTAGGGATTCCATTCAGGTA AGATTTTTGAAGTGATTCCAGTTGTTGGATCAGATATCTTTTTGAAGGTG ACAGCTGGGAGCAATAGTCAATGTGTGGTAGTACCAGTGACTTCCAAAGA GTTAGCATTACTTGACAATCTCTTGACAATCTCATCTTCAATGTATTTCA TTTTTTCAAAATTAAATGTAATTCTCTAGAAGTAAGATTAATTAATTTGC TTCTCTTGAAAACCAGAAATAATTATCTTTTATCTCATAGCTAAACCAGG GTGTCTACGGGACCTTGAAAACCTTGAAAATGAACCACCCAACCTTGAAA ACCTTGAAAACTATCAATTTTCTGGGAAAAACCTTGAAAACCTTGAAAAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNAAACCTTGAAAATGAACCACCCAACCTTGAAAACC TTGAAAACTATCAATTTTCTGGGAAAAACCTTGAAAACCTTGAAAAATCG TTAAAAACCTTGAAAAATCGTTAAAAACCTTGAAAAGCACTATCCAGTCA TTCGAAAAGTAAGAATAAGTAAAAAATCGCCTGCGGCGCTAAACCTTTAT AACGTTTAGAGAATTCCGTATTTCCCTGTTTCTGTTGCGATTATGTCGCA ATGAATGCAACATTTTCTTTTATTATTATTCAAAAAAACATTTCAACAAA TATTTTTCAGCATAAGCTTTTTGTTTTATTAAAAACATCATCAGTGCATA TACAAGTAATTGAATAATTAATTTTCTGGCTATTTTATTACAACAATTAT CTTTTATCATTAGCTGAGTTTTTGTCACTAATTTTCGTTTGCATGAGCCC TAAGAAATCGACTGTTCCCCAATTTTCAAATCGCTTCAGGGCGTCTTGGA ATAATGGCCGTTCATCAATAAAATTTTGAGGATTCCTTGAAACAACTCTT TTGGCAATTGATTTTGTAAAAAACAAAATCAAAAACAAGGCGTTTTTTAG CCATTTGAAAGAGTCAAAATCAAAATTTTCTCTCGTTGACGCAAACCATG GTTGCGCCTCCTCGGTCACTGTAAACAATTGGTATTGCTTCTAATTCTTT ATTTCTACAATTGGAAGACTAGGGAGCTGGAGTATTTCTTTTTGTGGTAA AAACCTTGAAAACCTTAAATCCCGGAAAAAAAATCCTTAGACACCCTGTA AACATCCATTTAAAAAAAGCATAACATTAAACATTAAATTATTCTCCTGG AAATACCGTCAACTGGTCTAACTAAGAACAATTGGTCAAAACACGGGACA GTTAATATTTGGCCTGTATTTTCACTTACTGTTAAATCTATTTGACAACA AATTTGCTTTGATAACTCCAAGTTTATCAATCATACTTTCTGTCATAACA TGTTATGATAACTTTCACTGATAGCGCACTTTTTTTAACTTTTTTGTTTT CATTCAAAATGACCGGACTTCGATTGGAGAATTTGAGAACGCCCGCCGCA TATCACCCGATGTGATTAACAAATAACGAGTGTGTAACTTGCCGCACAAG TGACGTCAAACGTGTCACACGCTTCATTGTTTTGTTACTAATTTGGTCTT CGTTCCAGCCATTCGCGTGTGTTCCACTACAGATTTTTTTCATATTACGA TTTAAAAGCCTACTTTGTGCGAAAGAGAAATTGTGTATTTTTAATACGCT GTTCATTAACTCACATCAAATGACTTTGGAGGTTTGAAATGGTGGCTGAA TTGCCATCCCATGTTTTGTTAGATAGTCCCAAGTTGGAGCAGTTGACGGT AGCACAGCAAAATGACGCCATATCTCAAACTAAAACATTGATCTGAAACT AGCATATGTTTTTTTGCGTTTCATGAATTTTTTCATATACAGTAATTCAA GATGGCAGATTGAAAAGCGAAAAGGTCTATTAAAAACTTCAACATCAAAA CAATGACAAAGAATATTCAATACAAGCATGCTTTACCAATTATACTTTTA TGTTTTTGTTGTGATGCAGGAGTTTTTAATTAATCAACATGACATTACAC AACATATCTTGCATATCCTAGCCTGTATACCGATTGTGTTCTAAAACAGC GGATAGACAATACTTCGCTCTCCACTAAGTATTTCATTCAATGTTACTCC AGAGTCAATAATAATTCCATGGTTAAATATAAAAATGCATCTCTATACAG ATCTATATTATAATACGCTTAAATCTGAACTCTCCCATTCTCGCATGAAG CTATTTTGCTAGTGATTTTTAAGCACATGACAGTTCTTTTAGCACCTTTT CCTTGTCGATCTTTCATTTGCTAAATTTCTGCCCCTAAATTGAAAGCCGT GAAAAGGATTCAATTTGGTGATTTTTATTATGGTTTCCATCCATACATTC CATCCCATTTGCTACACTGTAATACATACAGATAAGATACATAGGGTATG GAATATAGAAGTCAAGGGGCTCTGAAAAAAATTAAAATTAAAATGCATAT TTCTTAGGGACTAAGTCCAATCAGTATCAAACTTATAATTTATATTCTTT TTTCAGGAAACTGGGATTGGTCTAAAGATGAACAACTTACGCAAGAAAGT GAAAAACAATGAGCTAGCAAAACGTATAAAAACATTAATTCGCAAGTGGA AGGAAGATCTTGAAAAACTAAAAACCAATAATGGGCTTGATACAACTCAG GGGAAACAAAACTCTAAACAAAATAATCCAATAGGTGTAAAACGTAAATT TAATAATACAGAAGATGTAAAATTGAGGACTAGTTCACCGAAGGTTCATT CTCCAAGTTTAGCACAACGAAAACATCAATCCTCACCTAATAGAAATCAC ACACGCTCTCCTCACCCTTCGACGTCGTCCCCTCGTGTTTCAACATCACA GAGCGCCAACAGAATCTCGTCACCTTCTACTTTATCACCAAAACGTAGTA ACAGCCGACCAGCCTCTCGTAATAACGTATCCAGTCCTCTGAGTAAGAAA CATGCAAGAAATACACCAAGTCCGTTGGTTACTAATCACACTAATACAAA AGAAACTATACCAGATTCAAGGAACAATAATTGTAGTCTTAATAACCAAA ACAATAAAACGAAAGCTAATAATGAGAATGGTGTTCACGACATTGATAAG AAAAACAGTATTGAAGTAGCAAAAGAACAATTTGATTTAAATAATAAGGA TACAGATACTCGCATTCAAGAGGACAGGATATCTTCTATAGATTCTGGAT ATCAGGGAACATTGAGCGATGAATTTTCACCCACTGAACTATCACCAGCT GATAAATTTGTACCGATCGATAAACCTCCAGAGATTTTACATAGCCCACC GCCTCCAAGCCCAAGCTCTTTTGAAGCAATTGAGGAGGAAAATTTAGAAG TGAATCGTAAGGATTATGTAGATAATCCGACTTCACCAAGTGTTGTAGCC GATGGTGTAAATGGGTTATATGATGACAGTGATAATTTTTGTACTTGGAC GGATGAAGTTAACCACGGGGAATTTGCAGTATTGCCATATGTCATTCTTG ACTAAGAGAGATTCTTAACCTTTTGTTACTGTTTCTACTACTTCAGACCT TGTCTCCACCAGATGATGAGTTTGTCACATTATTTGTCTTAAAAAAAGCA ACCAGACTGGATTATTCATGATTTTTATGATCTGATCATATTCTACATCG AATTGTCTCAACTGCTGGAAATTACACTAATTTTGTTCATGTTTGAATGT GGAAATTTTGCCTTTTTTGAAGAGGAGTACTTGGGCAAATGCGAAATCGG GAGAATCAGTTTTTTTATTTAAACTTTCGTTTTTTTTGGAACTTTTGGAA ATTTTTTAACAATGATATCAACTATGGTTACACACAAAGTCACTACAGTT TTATGACGAAAACTTCCGAAATCGTTGCTTCAAAGCTTTCCACAGGAAAC TCAGAACGTTTTTAAAATTTTTGGTTTACAGTAACCAAAGTCCGTATAAA AAAACCGGTCTGGAAGCCTTTTGTTTCTTTCCATTGCTTCTTACTTTAAA AACTTGCGTTTGAGAAATTAGTTTGTTTTGCTCGCTTTTTGATTATGTGA TTAAATCTCAAACCAATTCCAAGAGGAACACCGGTAACGTGATCAAAAAC TGTGCAAATCGATTTTTATCTTTTGATATTAACAAAGGAAAAGCTAACAA AAAGTTAAAACAATAAGCTTCTAGACCAGAGTTTTCCTTTGTGTTTTGTA TAGCCGCAAGTTTATACATCTCTATTTTTCACTGTTGAAAATGGATAAAA TCTTTGGTTAAAGGGATAAACGGATGGCTCTAGATGGTTTGAGATCTTTG ACCTGTAGAATGCTTTCTGAGCAAAACTCCCATAAATCTTTACGTCAAAC TATTAGTCTATTCTTTAAACGACTTTTAGATTTCAGCTAGAAAACTTTCC CCTGAAGAATCCTGTGAGTGATGTATTAAGAGATTTCTTGTCATGTCGCA GCTGAGGAAAGAATGGAGGTCAACATATTTAGAGGTTTTCTCTCAGGACT AGAAAAGGTTTCTTTAGGCTAAAATGATCTCAAACCACCCAATTATGTCC TTTTATCTCTTTATCTTGCAACGTGAAATTTCACCATATTATATGACTAC TTTTCGTTTTGTGGAAACAGGGTCCAGTAGAACTAATTTTTAAACAGAAA GAAAACAAATGAATCATTTTGAAAGCAAAATTAATATTTGGATGCCTCAA TTCTTTCCAGGGATCTATCACCTTCAGAACAGTTTTCGAAA

Coding sequence (CDS) from alignment at sc0000703:108994..116634-

>TCONS_00028772 ID=TCONS_00028772|Name=TCONS_00028772|organism=Clytia hemisphaerica|type=CDS|length=3411bp|location=Sequence derived from alignment at sc0000703:108994..116634- (Clytia hemisphaerica)
GAAACTGGGATTGGTCTAAAGATGAACAACTTACGCAAGAAAGTGAAAAA
CAATGAGCTAGCAAAACGTATAAAAACATTAATTCGCAAGTGGAAGGAAG
ATCTTGAAAAACTAAAAACCAATAATGGGCTTGATACAACTCAGGGGAAA
CAAAACTCTAAACAAAATAATCCAATAGGTGTAAAACGTAAATTTAATAA
TACAGAAGATGTAAAATTGAGGACTAGTTCACCGAAGGTTCATTCTCCAA
GTTTAGCACAACGAAAACATCAATCCTCACCTAATAGAAATCACACACGC
TCTCCTCACCCTTCGACGTCGTCCCCTCGTGTTTCAACATCACAGAGCGC
CAACAGAATCTCGTCACCTTCTACTTTATCACCAAAACGTAGTAACAGCC
GACCAGCCTCTCGTAATAACGTATCCAGTCCTCTGAGTAAGAAACATGCA
AGAAATACACCAAGTCCGTTGGTTACTAATCACACTAATACAAAAGAAAC
TATACCAGATTCAAGGAACAATAATTGTAGTCTTAATAACCAAAACAATA
AAACGAAAGCTAATAATGAGAATGGTGTTCACGACATTGATAAGAAAAAC
AGTATTGAAGTAGCAAAAGAACAATTTGATTTAAATAATAAGGATACAGA
TACTCGCATTCAAGAGGACAGGATATCTTCTATAGATTCTGGATATCAGG
GAACATTGAGCGATGAATTTTCACCCACTGAACTATCACCAGCTGATAAA
TTTGTACCGATCGATAAACCTCCAGAGATTTTACATAGCCCACCGCCTCC
AAGCCCAAGCTCTTTTGAAGCAATTGAGGAGGAAAATTTAGAAGTGAATC
GTAAGGATTATGTAGATAATCCGACTTCACCAAGTGTTGTAGCCGATGGT
GTAAATGGGTTATATGATGACAGTGATAATTTTTGTACTTGGACGGATGA
AGTTAACCACGGGGAATTTGCAGTATTGCCATATGTCATTCTTGACTAAG
TGTTGAACATAGAAGCTGTAAACGAAATGACTTCCTGGCTAGAGAAAATA
ACTATCACTGCAGAGGTTTTGCAGATGCCTCCCACTGCCAAAGAAGTGAA
AGCCCGTTTGAAGAAAGCAATTGACGAAGAAGGAAATGAAACTGGGATTG
GTCTAAAGATGAACAACTTACGCAAGAAAGTGAAAAACAATGAGCTAGCA
AAACGTATAAAAACATTAATTCGCAAGTGGAAGGAAGATCTTGAAAAACT
AAAAACCAATAATGGGCTTGATACAACTCAGGGGAAACAAAACTCTAAAC
AAAATAATCCAATAGGTGTAAAACGTAAATTTAATAATACAGAAGATGTA
AAATTGAGGACTAGTTCACCGAAGGTTCATTCTCCAAGTTTAGCACAACG
AAAACATCAATCCTCACCTAATAGAAATCACACACGCTCTCCTCACCCTT
CGACGTCGTCCCCTCGTGTTTCAACATCACAGAGCGCCAACAGAATCTCG
TCACCTTCTACTTTATCACCAAAACGTAGTAACAGCCGACCAGCCTCTCG
TAATAACGTATCCAGTCCTCTGAGTAAGAAACATGCAAGAAATACACCAA
GTCCGTTGGTTACTAATCACACTAATACAAAAGAAACTATACCAGATTCA
AGGAACAATAATTGTAGTCTTAATAACCAAAACAATAAAACGAAAGCTAA
TAATGAGAATGGTGTTCACGACATTGATAAGAAAAACAGTATTGAAGTAG
CAAAAGAACAATTTGATTTAAATAATAAGGATACAGATACTCGCATTCAA
GAGGACAGGATATCTTCTATAGATTCTGGATATCAGGGAACATTGAGCGA
TGAATTTTCACCCACTGAACTATCACCAGCTGATAAATTTGTACCGATCG
ATAAACCTCCAGAGATTTTACATAGCCCACCGCCTCCAAGCCCAAGCTCT
TTTGAAGCAATTGAGGAGGAAAATTTAGAAGTGAATCGTAAGGATTATGT
AGATAATCCGACTTCACCAAGTGTTGTAGCCGATGGTGTAAATGGGTTAT
ATGATGACAGTGATAATTTTTGTACTTGGACGGATGAAGTTAACCACGGG
GAATTTGCAGTATTGCCATATGTCATTCTTGACTAAGTGTTGAACATAGA
AGCTGTAAACGAAATGACTTCCTGGCTAGAGAAAATAACTATCACTGCAG
AGGTTTTGCAGATGCCTCCCACTGCCAAAGAAGTGAAAGCCCGTTTGAAG
AAAGCAATTGACGAAGAAGGAAATGAAACTGGGATTGGTCTAAAGATGAA
CAACTTACGCAAGAAAGTGAAAAACAATGAGCTAGCAAAACGTATAAAAA
CATTAATTCGCAAGTGGAAGGAAGATCTTGAAAAACTAAAAACCAATAAT
GGGCTTGATACAACTCAGGGGAAACAAAACTCTAAACAAAATAATCCAAT
AGGTGTAAAACGTAAATTTAATAATACAGAAGATGTAAAATTGAGGACTA
GTTCACCGAAGGTTCATTCTCCAAGTTTAGCACAACGAAAACATCAATCC
TCACCTAATAGAAATCACACACGCTCTCCTCACCCTTCGACGTCGTCCCC
TCGTGTTTCAACATCACAGAGCGCCAACAGAATCTCGTCACCTTCTACTT
TATCACCAAAACGTAGTAACAGCCGACCAGCCTCTCGTAATAACGTATCC
AGTCCTCTGAGTAAGAAACATGCAAGAAATACACCAAGTCCGTTGGTTAC
TAATCACACTAATACAAAAGAAACTATACCAGATTCAAGGAACAATAATT
GTAGTCTTAATAACCAAAACAATAAAACGAAAGCTAATAATGAGAATGGT
GTTCACGACATTGATAAGAAAAACAGTATTGAAGTAGCAAAAGAACAATT
TGATTTAAATAATAAGGATACAGATACTCGCATTCAAGAGGACAGGATAT
CTTCTATAGATTCTGGATATCAGGGAACATTGAGCGATGAATTTTCACCC
ACTGAACTATCACCAGCTGATAAATTTGTACCGATCGATAAACCTCCAGA
GATTTTACATAGCCCACCGCCTCCAAGCCCAAGCTCTTTTGAAGCAATTG
AGGAGGAAAATTTAGAAGTGAATCGTAAGGATTATGTAGATAATCCGACT
TCACCAAGTGTTGTAGCCGATGGTGTAAATGGGTTATATGATGACAGTGA
TAATTTTTGTACTTGGACGGATGAAGTTAACCACGGGGAATTTGCAGTAT
TGCCATATGTCATTCTTGACTAAGTGTTGAACATAGAAGCTGTAAACGAA
ATGACTTCCTGGCTAGAGAAAATAACTATCACTGCAGAGGTTTTGCAGAT
GCCTCCCACTGCCAAAGAAGTGAAAGCCCGTTTGAAGAAAGCAATTGACG
AAGAAGGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016316XLOC_016316Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028772-proteinTCONS_00028772-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028772-exon-sc0000703-1575043694:116313..116634TCONS_00028772-exon-sc0000703-1575043694:116313..116634Clytia hemisphaericaexon
TCONS_00028772-exon-sc0000703-1575043694:116092..116166TCONS_00028772-exon-sc0000703-1575043694:116092..116166Clytia hemisphaericaexon
TCONS_00028772-exon-sc0000703-1575043694:108994..111228TCONS_00028772-exon-sc0000703-1575043694:108994..111228Clytia hemisphaericaexon
TCONS_00028772-exon-sc0000703-1510915933:116313..116634TCONS_00028772-exon-sc0000703-1510915933:116313..116634Clytia hemisphaericaexon
TCONS_00028772-exon-sc0000703-1510915933:116092..116166TCONS_00028772-exon-sc0000703-1510915933:116092..116166Clytia hemisphaericaexon
TCONS_00028772-exon-sc0000703-1510915933:108994..111228TCONS_00028772-exon-sc0000703-1510915933:108994..111228Clytia hemisphaericaexon
TCONS_00028772-exon-sc0000703-1491911889:116313..116634TCONS_00028772-exon-sc0000703-1491911889:116313..116634Clytia hemisphaericaexon
TCONS_00028772-exon-sc0000703-1491911889:116092..116166TCONS_00028772-exon-sc0000703-1491911889:116092..116166Clytia hemisphaericaexon
TCONS_00028772-exon-sc0000703-1491911889:108994..111228TCONS_00028772-exon-sc0000703-1491911889:108994..111228Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000703supercontigsc0000703:108994..116634 -
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.3386 52.6764 27.9711 24.2639 76.8674 54.86 44.9722 47.5826 18.6922 19.9711 15.1662 13.735 12.8756 12.8702 13.1379 17.1327 18.8611 18.587 8.04616 7.29623 16.3816 14.7996 111.351 89.424 39.9221 40.9682 19.2671 16.2782 75.2142 97.5905
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003617TFIIS/CRSP70_N_sub
IPR017923TFIIS_N
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028772 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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