TCONS_00035632-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035632-protein
Unique NameTCONS_00035632-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length215

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035632-protein ID=TCONS_00035632-protein|Name=TCONS_00035632-protein|organism=Clytia hemisphaerica|type=polypeptide|length=215bp
VENKMMNILKLTSCLLLVSMVSSLGCPGVCNKGAVSKREGYCSSLPSNIC
GDKCSCSDDAHIQDGYYCECRSCQLKSDCNALFNAGNTFSGIYRIAPGGN
LMDVYCDMNATHPSSSWKRGGWAVIQRRVDGSTNFFRNWASYKSGFGNLQ
NELWLGNENIHLLTANGVNELWIEMTDYAGFTKEARYTSFSVGNEASKYK
LTVSGFSGDAGDQLG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020869XLOC_020869Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035632TCONS_00035632Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 74..215
e-value: 1.5E-15
score: 67.6
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 77..214
e-value: 2.7E-42
score: 145.0
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 70..215
score: 35.839
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 74..215
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 37..215
e-value: 3.4E-51
score: 173.5

Blast
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BLAST of TCONS_00035632-protein vs. Swiss-Prot (Human)
Match: FCN3 (Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.142e-32
Identity = 62/139 (44.60%), Postives = 84/139 (60.43%), Query Frame = 0 
Query:   78 DCNALFNAGNTFSGIYRI-APGGNLMDVYCDMNATHPSSSWKRGGWAVIQRRVDGSTNFFRNWASYKSGFGNLQNELWLGNENIHLLTANGVNELWIEMTDYAGFTKEARYTSFSVGNEASKYKLTVSGFS-GDAGDQL 214
            +C  L + G T SG Y +  P G  + V+CDM+        + GGW V QRR DGS +FFR+W+SY++GFGN ++E WLGNEN+H LT  G  EL +E+ D+ G    A Y +F +  E   Y+L +  FS G AGD L
Sbjct:   92 NCRELLSQGATLSGWYHLCLPEGRALPVFCDMDT-------EGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSL 223
The following BLAST results are available for this feature:
BLAST of TCONS_00035632-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN31.142e-3244.60Ficolin-3 OS=Homo sapiens GN=FCN3 PE=1 SV=2[more]
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