TCONS_00027322-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00027322-protein
Unique Name	TCONS_00027322-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	736

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00027322-protein ID=TCONS_00027322-protein|Name=TCONS_00027322-protein|organism=Clytia hemisphaerica|type=polypeptide|length=736bp
MADYQQLNPESGNNDNDPEVEQRKPSKMLWGYPMQVYFILGNEFCERFSY
YGMHAILVIYLTSSLHMSKDDATAVYHAFNMLCYFSPIFGAIIADSYWGK
YKTILYVSLIYALGNIVVSITAVPSVLQAVQQAGPYIGLILIALGTGGIK
PCVSAFGGDQFEADQEDKLQSFFSIFYFAINFGSLIATLLTPVLRGDVQC
FGRDCYPLAFGVPAILMVVSLILFVSGSALYKKVPPEGNVVIEVASACGN
AIKNRLSSCGSGEKREHWIEWADTNTFSPILKSDIKALFKVLFMFLPLPI
FWTLFDQQGSRWVLQAMEMNGDIGFTTVKPDQMQALNPVFVMVLIPFVEF
VVYPILRKCHLLKTPLQKMGCGMILTSLSFVVAGFLQLHMEAKSSVANLP
ATGFSNFRVINTVPCGINVYGENMKVKNLSIPYHEATDYFAVPVKFNSLQ
VSTTCSPKMELSKVPISIQQQKSYSLVIGTNHSKLITEQLTDDVTPLKHG
SAKVRFVHAGGSVADQISVKLGKTKISLKPFETVEYRKLDSRDYNIHIKE
NDTHDALGSKKIHLGNGGIYTVVIQPNKNIDKLKIYLYADVSPRPISILW
QVPQYLIITLGEVMFSITGLEFAYSQSPPSMKSCIMAAWLLTVSIGNLLV
VILAGVKLTEDMAEEFFFFAILCAVVTVIFAIMSWFYKYVYYGSERTVAS
LENDESSPLIGGEEDSGVDNDAHEIDKGGKDDETKM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_015378	XLOC_015378	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00027322	TCONS_00027322	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025510	DUF4397
IPR000109	POT_fam
IPR018456	PTR2_symporter_CS
IPR020846	MFS_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport
GO:0006857	oligopeptide transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006857	oligopeptide transport
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 20..231 e-value: 4.1E-24 score: 84.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 281..705 e-value: 3.7E-14 score: 52.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 703..736
IPR025510	Domain of unknown function DUF4397	PFAM	PF14344	DUF4397	coord: 407..510 e-value: 4.5E-9 score: 37.0
IPR000109	Proton-dependent oligopeptide transporter family	PFAM	PF00854	PTR2	coord: 101..414 e-value: 1.1E-100 score: 337.2 coord: 590..654 e-value: 4.3E-14 score: 52.1
IPR018456	PTR2 family proton/oligopeptide symporter, conserved site	PROSITE	PS01022	PTR2_1	coord: 90..114
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 36..224 e-value: 3.3167E-10 score: 60.0201
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 591..683 e-value: 7.86143E-4 score: 39.6045
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 593..689
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 14..234 coord: 275..386

Blast

[Close]

BLAST of TCONS_00027322-protein vs. Swiss-Prot (Human)
Match: S15A2 (Solute carrier family 15 member 2 OS=Homo sapiens GN=SLC15A2 PE=1 SV=2)

HSP 1 Score: 515.383 bits (1326), Expect = 1.222e-173
Identity = 281/675 (41.63%), Postives = 417/675 (61.78%), Query Frame = 0

Query:   32 YPMQVYFILGNEFCERFSYYGMHAILVIYLTSSLHMSKDDATAVYHAFNMLCYFSPIFGAIIADSYWGKYKTILYVSLIYALGNIVVSITAVPSVL-QAVQQAGPYIGLILIALGTGGIKPCVSAFGGDQFEADQEDKLQSFFSIFYFAINFGSLIATLLTPVLRGDVQCFGRDCYPLAFGVPAILMVVSLILFVSGSALYKKVPPEGNVVIEVASACGNAIKNRLSS-CGSGEKREHWIEWADTNTFSPILKSDIKALFKVLFMFLPLPIFWTLFDQQGSRWVLQAMEMNGDIGFTTVKPDQMQALNPVFVMVLIPFVEFVVYPILRKCHLLKTPLQKMGCGMILTSLSFVVAGFLQLHMEAKSSVANLPATGFSNFRVINTVPCGINVYG-ENMKVKNLSIPYHEATDY------------FAVPVKFNSLQVSTTCSPKMELSKVPISIQQQKSYSLVIGTNHSKLITEQLTDDVTPLKHGSAKVRFVHAGGSVADQISVKLGKTKISL---KPFETVEYRKLDSRDY-NIHIKENDTHDALGSKKIHLGNGGIYTVVIQPNKNIDKLKIYLYADVSPRPISILWQVPQYLIITLGEVMFSITGLEFAYSQSPPSMKSCIMAAWLLTVSIGNLLVVILAGVKLTEDMAEEFFFFAILCAVVTVIFAIMSWFY 687
            YP+ + FI+ NEFCERFSYYGM A+L++Y    LH ++D +T++YHAF+ LCYF+PI GA IADS+ GK+KTI+Y+SL+Y LG+++ S+ A+P +  Q V      IGL LIALGTGGIKPCV+AFGGDQFE    ++   +FS+FY +IN GSLI+T +TP+LRGDVQCFG DCY LAFGVP +LMV++L++F  GS +Y K PPEGN+V +V      AI NR  +  G   KR+HW++WA    +   L  D+KAL +VLF+++PLP+FW L DQQGSRW LQA+ MN ++GF  ++PDQMQ LNP+ V++ IP  +FV+Y ++ KC +  + L+KM  GMIL  L+F VA  +++ +   +     P   F     +      + V G EN  +   SI   + T +            F   +K+++L + T             S+Q++  YSLVI  + + + +  + D  +   +G   VRFV+   ++   +++ L  T  SL   + +    YR +   +Y  +H +  D + +L    +  G   ++ +    N+ +   KI    D+    +SI WQ+PQY ++T GEVMFS+TGLEF+YSQ+P SMKS + AAWLLT+++GN++V+++A        A EF  F+ L  V+ +IF+IM ++Y
Sbjct:   42 YPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVYVLGHVIKSLGALPILGGQVVHTVLSLIGLSLIALGTGGIKPCVAAFGGDQFEEKHAEERTRYFSVFYLSINAGSLISTFITPMLRGDVQCFGEDCYALAFGVPGLLMVIALVVFAMGSKIYNKPPPEGNIVAQVFKCIWFAISNRFKNRSGDIPKRQHWLDWA-AEKYPKQLIMDVKALTRVLFLYIPLPMFWALLDQQGSRWTLQAIRMNRNLGFFVLQPDQMQVLNPLLVLIFIPLFDFVIYRLVSKCGINFSSLRKMAVGMILACLAFAVAAAVEIKINEMAPAQPGPQEVFLQVLNLADDEVKVTVVGNENNSLLIESIKSFQKTPHYSKLHLKTKSQDFHFHLKYHNLSLYTEH-----------SVQEKNWYSLVIREDGNSISSMMVKDTESRTTNGMTTVRFVN---TLHKDVNISLS-TDTSLNVGEDYGVSAYRTVQRGEYPAVHCRTEDKNFSLNLGLLDFGAAYLFVITNNTNQGLQAWKI---EDIPANKMSIAWQLPQYALVTAGEVMFSVTGLEFSYSQAPSSMKSVLQAAWLLTIAVGNIIVLVVAQFSGLVQWA-EFILFSCLLLVICLIFSIMGYYY 696

The following BLAST results are available for this feature:

BLAST of TCONS_00027322-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00027322-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S15A2	1.222e-173	41.63	Solute carrier family 15 member 2 OS=Homo sapiens ...	[more]

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TCONS_00027322-protein (polypeptide) - C. hemisphaerica