TCONS_00020669-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020669-protein
Unique NameTCONS_00020669-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length330

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020669-protein ID=TCONS_00020669-protein|Name=TCONS_00020669-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
MSIVDSETKNYLSNVVSAFSPGIRYACAYGSGVFKQSGHQSIKDNMIDFI
FVVNDAFSWHQQTLKKYPDHYSIVKRLGPKGLSDYQRSFGAGVFFNTCVE
FDDRLIKYGIIDMEMFVDDLLEWKDLYIAGRLHKPVYTLKGLDNPLIEKP
FSANLKSAVLTSIFLLDEKCSMEELFIKIASLSYTGDPRMIVGEDKGKVR
NIVTPNIEKFHTLYDPILKNISNINVNNSSIIQDMDPLQRFELLQELPKN
LNTLVLRNLNLNNKAKDFQKRFIDLSNEKIKESFAKAVSDIVRSSSTTQT
IKNSTTAGVQKSLYYGGQKMKKMFKGLIRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011597XLOC_011597Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020669TCONS_00020669Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015222Tam41
Vocabulary: Molecular Function
TermDefinition
GO:0004605phosphatidate cytidylyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0032049cardiolipin biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032049 cardiolipin biosynthetic process
molecular_function GO:0004605 phosphatidate cytidylyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 258..278
IPR015222Phosphatidate cytidylyltransferase, mitochondrialPFAMPF09139Mmp37coord: 12..322
e-value: 6.8E-100
score: 334.5
IPR015222Phosphatidate cytidylyltransferase, mitochondrialPIRSFPIRSF028840MMP37coord: 1..327
e-value: 7.0E-105
score: 349.3

Blast
[Close]
BLAST of TCONS_00020669-protein vs. Swiss-Prot (Human)
Match: TAM41 (Phosphatidate cytidylyltransferase, mitochondrial OS=Homo sapiens GN=TAMM41 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 9.450e-66
Identity = 119/298 (39.93%), Postives = 175/298 (58.72%), Query Frame = 0 
Query:   15 VVSAFSPGIRYACAYGSGVFKQSGHQSIKDN-MIDFIFVVNDAFSWHQQTLKKYPDHYSIVKRLGPKGLSDYQRSFGAGVFFNTCVEFDDRLIKYGIIDMEMFVDDLLEWKDLYIAGRLHKPVYTLKGLDNPLIEKPFSANLKSAVLTSIFLLDEKCSMEELFIKIASLSYTGDPRMIVGEDKGKVRNIVTPNIEKFHTLYDPILKNISNINVNNSSIIQDMD--PLQRFELLQELPKNLNTLVLRNLNLNNKAKDFQKRFIDLSNEK-IKESFAKAVSDIVRSSSTTQTIKNSTTAG 308
            ++S F   +  A  YGSGV++Q+G  S + N M+DF+F V+D  +WH + LKK   HYS +K LGPK ++  Q ++GAGV++N+ +  + RLIKYG+I   + ++DLL W +LYIAGRL KPV  +   ++  +      NLKSAV  +  +L E  S E+LFI+IA LSY+GD RM+VGEDK KV NIV PNI  F  LY  IL+    +   +     ++D  P  +F  L  LPK L   +   ++   K +D ++    ++++    +     +S IVR SS  Q+ K   TAG
Sbjct:   16 ILSHFPEELSLAFVYGSGVYRQAGPSSDQKNAMLDFVFTVDDPVAWHSKNLKKNWSHYSFLKVLGPKIITSIQNNYGAGVYYNSLIMCNGRLIKYGVISTNVLIEDLLNWNNLYIAGRLQKPVKIISVNEDVTLRSALDRNLKSAVTAAFLMLPESFSEEDLFIEIAGLSYSGDFRMVVGEDKTKVLNIVKPNIAHFRELYGSILQENPQVVYKSQQGWLEIDKSPEGQFTQLMTLPKTLQQQINHIMDPPGKNRDVEETLFQVAHDPDCGDVVRLGLSAIVRPSSIRQSTKGIFTAG 313
The following BLAST results are available for this feature:
BLAST of TCONS_00020669-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAM419.450e-6639.93Phosphatidate cytidylyltransferase, mitochondrial ... [more]
back to top