TCONS_00018407-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018407-protein
Unique NameTCONS_00018407-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length369

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018407-protein ID=TCONS_00018407-protein|Name=TCONS_00018407-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
IQGRLDEHMKTHANETDEDRHSRVKKKRVDSLSDEALDQISDQAIKYVDP
KTQEVKLRCKLCRKREFRMISSFEKHIQDHKAGRVQMAAPDAIDCEQCDR
SFNSAKRLERHMLTHQNKQEFECTRCEQSFSARSILQAHLRKCAIPTNKG
AEKRKATLKAKEEMMRQLKNLSDDELDDDVVMDEDDDDVIKEGEEVVQTE
SAVAHAHEEETDEPMVAMQHEGETVTINTEEEENELKFVEQTEMEVVNTN
DETSVQAETALVALQVIQANQQEAASLQEIINDPQSNATLSYVMECVSQA
VANEQVLASGEEGLVVGGEGAQLTGSMEIQSHQIISVSVQAQDETDTNIT
QDVEGFIQQEVSDPNPDNE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010324XLOC_010324Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018407TCONS_00018407Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 151..174
NoneNo IPR availableGENE3D2.40.155.10coord: 2..82
e-value: 0.0056
score: 16.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 95..115
e-value: 2.3E-4
score: 21.3
NoneNo IPR availableGENE3D3.30.160.60coord: 135..223
e-value: 0.0011
score: 18.5
NoneNo IPR availableGENE3D3.30.160.60coord: 83..103
e-value: 0.0031
score: 17.2
NoneNo IPR availableGENE3D3.30.160.60coord: 121..134
e-value: 4.2E-4
score: 20.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 121..141
e-value: 52.0
score: 6.9
coord: 57..80
e-value: 6.2
score: 15.1
coord: 93..115
e-value: 0.0013
score: 28.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 95..115
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 93..120
score: 11.489
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 121..153
score: 9.91
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 95..141
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 104..120
e-value: 3.2E-8
score: 33.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018407-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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