TCONS_00014959-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00014959-protein
Unique NameTCONS_00014959-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1044

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00014959-protein ID=TCONS_00014959-protein|Name=TCONS_00014959-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1044bp
WTPEHHNESIITNMAERKGSGKSHKSRNGSAKSLTDTVSKLTVRALQSLN
LSEVEDVNAPKLQVNEETNETESTGEKFPENKFERGGGGDESQSLPVNME
NFDDEADVDVDDHDDDVGDTDRPYEGGGGDGDVDDSGMDAGLDSEESDLE
EEEPMGEEQPQNDLVVLDPDHPLMKRFQNAYKDHLTKQDQKVSLELRELN
EELNSYMKQREEIGVELYGVQQELARQQLALDKLHDRYNEKTQVKLHWEM
KLGETKTLHKQVQNDLTLQRKKANELQSEVEDIASKLLYMEAAKEDVRSD
ISVLKRAADKSDAEGMKAQIEKKRQDLLVNKLVTKVDRLRSDIAMYDAQI
DAQKEEMKAATRNLTEAATELEAIELEKKQLLQQWNNSLIGMRRRDEAHS
AIQEAVSMQSQQIQAIETELEGYKRQILKAQEQNEQLTYMSNRIESDITS
VKKQVIICQNKHEAIKIEYSTYSRALNETESQLGRVQTDVNIRESELNNV
RKLIEKEFLEKVKLEDQLLSKMQGQLTADKASQYTKKMREKIRRKATETE
RAVAEVENEISKDVLEIVNATTRVRALQDILNNINKVIYQKNETISKIEN
EIVKRNAVIEKKQGTIDQMNKRIDSMINKNGDDAYVGPLELQIKTLQRQI
ESTSGECLELQQYWLRQQSDLVKIIRSVNEQHSEIESKKKQSTIMMQKKL
RIEGDVGSQKNEINDIERNIRSMQNDMTKLNVLIHRNRDKHQSLQQDNIL
MEHDFITALKDAELESVKIQTHIQGLNEEKERLLNAVVESERQILLWEKK
TKLAREARDTVNSEVGQGEIHAMKAEIHRMEVRYAQLMRQQEKMMQDMEK
SVFKRECIIVRGDALAKMERKKMGQPKMNAGTFHKKLSEMKKKIKQTNLE
ASQVEHEMKEVRDVQQELGTSLETKQSNTQRLQQSVDLQHDDIERMQELK
QKNLADIISKQQRGKYYTSLKAGKYTRLCKTVDGLQNEREKQEDRLQNIS
TLVDRAVVDYPELQTAFRDMSLSIGYREEVNTERSSLHRQVDVV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008363XLOC_008363Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00014959TCONS_00014959Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013956E3_ubiquit_lig_BRE1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 336..384
NoneNo IPR availableCOILSCoilCoilcoord: 820..847
NoneNo IPR availableCOILSCoilCoilcoord: 406..440
NoneNo IPR availableCOILSCoilCoilcoord: 539..559
NoneNo IPR availableCOILSCoilCoilcoord: 706..733
NoneNo IPR availableCOILSCoilCoilcoord: 975..1002
NoneNo IPR availableCOILSCoilCoilcoord: 259..286
NoneNo IPR availableCOILSCoilCoilcoord: 497..517
NoneNo IPR availableCOILSCoilCoilcoord: 609..629
NoneNo IPR availableCOILSCoilCoilcoord: 759..793
NoneNo IPR availableCOILSCoilCoilcoord: 182..216
NoneNo IPR availableCOILSCoilCoilcoord: 887..914
NoneNo IPR availableGENE3D1.20.5.50coord: 267..398
e-value: 0.037
score: 13.0
NoneNo IPR availableGENE3D1.20.5.340coord: 882..1042
e-value: 0.045
score: 13.0
coord: 399..521
e-value: 0.02
score: 14.2
NoneNo IPR availableGENE3D1.20.5.50coord: 643..754
e-value: 0.041
score: 13.1
coord: 522..642
e-value: 0.15
score: 11.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
IPR013956E3 ubiquitin ligase, BRE1PFAMPF08647BRE1coord: 667..764
e-value: 1.7E-16
score: 60.0

Blast
[Close]
BLAST of TCONS_00014959-protein vs. Swiss-Prot (Human)
Match: CCD40 (Coiled-coil domain-containing protein 40 OS=Homo sapiens GN=CCDC40 PE=2 SV=2)

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 338/959 (35.25%), Postives = 581/959 (60.58%), Query Frame = 0 
Query:   72 ESTGEKFP---ENKFERGGGGDESQSLPVNMENF-DDEADVDVDDHDDDVGDTDRP-YEGGGGDGDVDDSGMDAGLDSEESDLEEEEPMGEEQPQNDLVVLDPDHPLMKRFQNAYKDHLTKQDQKVSLELRELNEELNSYMKQREEIGVELYGVQQELARQQLALDKLHDRYNEKTQVKLHWEMKLGETKTLHKQVQNDLTLQRKKANELQSEVEDIASKLLYMEAAKEDVRSDISVLKRAADKSDAEGMKAQIEKKRQDLLVNKLVTKVDRLRSDIAMYDAQIDAQKEEMKAATRNLTEAATELEAIELEKKQLLQQWNNSLIGMRRRDEAHSAIQEAVSMQSQQIQAIETELEGYKRQILKAQEQNEQLTYMSNRIESDITSVKKQVIICQNKHEAIKIEYSTYSRALNETESQLGRVQTDVNIRESELNNVRKLIEKEFLEKVKLEDQLLSKMQGQLTADKASQYTKKMREKIRRKATETERAVAEVENEISKDVLEIVNATTRVRALQDILNNINKVIYQKNETISKIENEIVKRNAVIEKKQGTIDQMNKRIDSMINKNGDDAYVGPLELQIKTLQRQIESTSGECLELQQYWLRQQSDLVKIIRSVNEQHSEIESKKKQSTIMMQKKLRIEGDVGSQKNEINDIERNIRSMQNDMTKLNVLIHRNRDKHQSLQQDNILMEHDFITALKDAELESVKIQTHIQGLNEEKERLLNAVVESERQILLWEKKTKLAREARDTVNSEVGQGEIHAMKAEIHRMEVRYAQLMRQQEKMMQDMEKSVFKRECIIVRGDALAKMERKKMGQPKMNAGTFHKKLSEMKKKIKQTNLEASQVEHEMKEVRDVQQELGTSLETKQSNTQRLQQSVDLQHDDIERMQELKQKNLADIISKQQRGKYYTSLKAGKYTRLCKTVDGLQNEREKQEDRLQNISTLVDRAVVDYPELQTAFRDMSLSIG 1025
            E  G+  P   +++F    G D   S   ++E F   E  +     D    + D P ++        ++  M   ++SE SD EE E  G     + LVVLDPDHPLM RFQ A K++L +Q +K+ L+L+EL         QR+E+GV LY VQQ L   Q  L+K HDR+   +  +   E +L   + L+ +       +RKK   LQ+E+E++A  L YM+   +D+R DI V+ +   K++ E ++A+IEKK+QDL V++L T+  +L  DIA+++AQ  AQ E+ +   + ++EA TE++AI +EK++++QQW +SL+GM+ RDEAH A+ EA+     Q ++ + E+E YK+ I+K +E+NE+L  + NR E++ T ++K    C  K  A++ +++TY   L +TE  L + Q +  I   EL  +R+ I+ E   + K +  +  K+Q  +T++K ++Y  ++  +++++ T     ++++  +I++  L+I + ++R+ A Q  L  +++ + + NE I+  ++EI +R  +IE+KQG I+ +NK+++ M+++ G +  VGPLEL+IK L + I+   G+ ++ Q  WLR Q ++VK+ +   EQ + +++ KK+  IM QKKLR+E  +  +K E  +IE +++ + ND+ KLN+L+++NR   + L+Q+N + E++F+ +LK +E E++K+Q  +  L+EEK  LLN +VE+E QI+LWEKK +LA+E R +V+SE+GQ EI AMK EIHRM+VR  QL++QQEKM++ ME +V +RE +  + +   KM+RK + +       FH K  E+++KI+       +    + E+ + Q+ + +SL  KQ     +Q   D    D+ R+  LK++NL++I++ Q R K+  ++K G+Y  L ++   L  ER++ + RL  I+T++DR   +YP+ Q A   +S  I 
Sbjct:  190 EPQGQVLPMGVQHRFRLSHGSDIESS---DLEEFVSQEPVIPPGVPDAHPREGDLPVFQDQIQQPSTEEGAMAERVESEGSD-EEAEDEG-----SQLVVLDPDHPLMVRFQAALKNYLNRQIEKLKLDLQELVVATKQSRAQRQELGVNLYEVQQHLVHLQKLLEKSHDRHAMASSERRQKEEELQAARALYTKTCAAANEERKKLAALQTEMENLALHLFYMQNIDQDMRDDIRVMTQVVKKAETERIRAEIEKKKQDLYVDQLTTRAQQLEEDIALFEAQYLAQAEDTRILRKAVSEACTEIDAISVEKRRIMQQWASSLVGMKHRDEAHRAVLEALRGCQHQAKSTDGEIEAYKKSIMKEEEKNEKLASILNRTETEATLLQKLTTQCLTKQVALQSQFNTYRLTLQDTEDALSQDQLEQMILTEELQAIRQAIQGELELRRKTDAAIREKLQEHMTSNKTTKYFNQLILRLQKEKTNMMTHLSKINGDIAQTTLDITHTSSRLDAHQKTLVELDQDVKKVNELITNSQSEISRRTILIERKQGLINFLNKQLERMVSELGGEE-VGPLELEIKRLSKLIDEHDGKAVQAQVTWLRLQQEMVKVTQEQEEQLASLDASKKELHIMEQKKLRVESKIEQEKKEQKEIEHHMKDLDNDLKKLNMLMNKNRCSSEELEQNNRVTENEFVRSLKASERETIKMQDKLNQLSEEKATLLNQLVEAEHQIMLWEKKIQLAKEMRSSVDSEIGQTEIRAMKGEIHRMKVRLGQLLKQQEKMIRAMELAVARRETVTTQAEGQRKMDRKALTRTD-----FHHKQLELRRKIRDVRKATDECTKTVLELEETQRNVSSSLLEKQEKLSVIQADFDTLEADLTRLGALKRQNLSEIVALQTRLKHLQAVKEGRYVFLFRSKQSLVLERQRLDKRLALIATILDRVRDEYPQFQEALHKVSQMIA 1133
The following BLAST results are available for this feature:
BLAST of TCONS_00014959-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD400.000e+035.25Coiled-coil domain-containing protein 40 OS=Homo s... [more]
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