TCONS_00011742-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00011742-protein
Unique NameTCONS_00011742-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length686

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00011742-protein ID=TCONS_00011742-protein|Name=TCONS_00011742-protein|organism=Clytia hemisphaerica|type=polypeptide|length=686bp
MFKVLLLISFAFTSIIVSAKCPTNLECPYKNGQCCEDLSTCCPSGYKCDP
KRSGYCISADEYIRFPVKSKSVSKVDKALFTCPDGCTQCASGSTCCVQSS
GRYGCCPLPDATCCSDYVHCCPYGYTCNAQNYCTRSANQITQKLVGTTPA
KQAPVIEVDIVSFNLGDIYCGDERTCPEGSTCCATPDGEYNCCSFPGASC
CNDGIHCCPQGFTCDSEKQECRRNSERVAMQHKFPAKKSLPPANIKEECK
KQPIDEKPKVVECGTDKQYFCLDGETCCLISPGVYGCCPMVEAVCCSDKK
HCCPHGATCDVAHGTCLSSSGEKVQMRAHKPANVHKEYPEPKTNQKCPDG
KTECADNNTCCELTSGQGYRCCKFKDAICCEDGLHCCPTGFTCSAGGLCN
NATVKATESKPMTLYKPMYKECKDGSECPSYSTCCKLNNGKYGCCPIPDA
TCCRDGVHCCPNHMRCDDGHCHHGDIRIPATKKFQSIQSNQDVSCNDGNV
CSENSTCCHSEDGSSACCPAPNAVCCSNGKHCCPSGHVCSEGGCVKANKQ
IEAYQLTTKLVSLESVRCPDHVSECPDGNTCCKLSSGQWGCCPLPKATCC
SDGVHCCPNGYTCGSGGYCTKGSEVIKASIKNAAINNLKSVACPDGTSQC
PDGSTCCKLSSGQYGCCPLPKATCCSDGVHCCPNGY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006598XLOC_006598Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00011742TCONS_00011742Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000118Granulin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000118GranulinSMARTSM00277GRAN_2coord: 170..221
e-value: 2.2E-18
score: 77.1
coord: 495..544
e-value: 2.0E-12
score: 57.3
coord: 347..399
e-value: 2.0E-14
score: 63.9
coord: 568..619
e-value: 5.2E-22
score: 89.1
coord: 82..133
e-value: 1.0E-14
score: 64.9
coord: 643..686
e-value: 1.9E-15
score: 67.3
coord: 422..471
e-value: 5.7E-14
score: 62.4
coord: 263..316
e-value: 1.2E-17
score: 74.6
coord: 21..56
e-value: 0.035
score: 5.4
IPR000118GranulinPFAMPF00396Granulincoord: 181..221
e-value: 1.3E-12
score: 47.7
coord: 94..133
e-value: 1.3E-12
score: 47.7
coord: 580..619
e-value: 1.5E-14
score: 53.9
coord: 359..399
e-value: 2.1E-11
score: 43.8
coord: 433..471
e-value: 3.9E-11
score: 43.0
coord: 655..686
e-value: 1.9E-12
score: 47.2
coord: 276..317
e-value: 1.3E-14
score: 54.1
coord: 506..544
e-value: 2.4E-10
score: 40.5
coord: 27..53
e-value: 2.9E-6
score: 27.4
IPR000118GranulinPROSITEPS00799GRANULINScoord: 600..613
IPR000118GranulinPROSITEPS00799GRANULINScoord: 453..466
IPR000118GranulinPROSITEPS00799GRANULINScoord: 296..309
IPR000118GranulinPROSITEPS00799GRANULINScoord: 114..127
IPR000118GranulinPROSITEPS00799GRANULINScoord: 201..214
IPR000118GranulinPROSITEPS00799GRANULINScoord: 380..393
NoneNo IPR availablePRODOMPD968187coord: 187..657
e-value: 8.0E-7
score: 132.0
NoneNo IPR availableSUPERFAMILY57277Granulin repeatcoord: 642..671
NoneNo IPR availableSUPERFAMILY57277Granulin repeatcoord: 265..291
NoneNo IPR availableSUPERFAMILY57277Granulin repeatcoord: 168..196
NoneNo IPR availableSUPERFAMILY57277Granulin repeatcoord: 421..448
NoneNo IPR availableSUPERFAMILY57277Granulin repeatcoord: 567..596
NoneNo IPR availableSUPERFAMILY57277Granulin repeatcoord: 82..109

Blast
BLAST of TCONS_00011742-protein vs. Swiss-Prot (Human)
Match: GRN (Granulins OS=Homo sapiens GN=GRN PE=1 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 1.834e-89
Identity = 217/668 (32.49%), Postives = 298/668 (44.61%), Query Frame = 0
Query:    1 MFKVLLLISFAFTSIIVSAKCPTNLECPYKNGQCCEDLSTCCPSGYK---CDPKRSGYCISADEYIRFPVKSKSVSKVDKALFTCPDGCTQCASGSTCCVQSSGRYGCCPLPDATCCSDYVHCCPYGYTCNAQNYC--TRSANQITQKLVGTTPAKQAPVIEVDIVSFNLGDIYCGDER-TCPEGSTCCATPDGEYNCCSFPGASCCNDGIHCCPQGFTCDSEKQECRRNSERVAMQHKFPAKKSLPPANIKEECKKQPIDEKPKVVECGTDKQYFCLDGETCCLISPGVYGCCPMVEAVCCSDKKHCCPHGATCDVAHGTCLSSSGEKVQMRAHKPANVHKEYPEPKTNQKCPDGKTECADNNTCCELTSGQGYRCCKFKDAICCEDGLHCCPTGFTC-SAGGLCNNA--TVKATESKPMTLYKPMYKE------CKDGSECPSYSTCCKLNNGKYGCCPIPDATCCRDGVHCCPNHMRC-DDGHCHHGDIRIPATKKF----QSIQSNQDVSCNDGNVCSENSTCCHSEDGSSACCPAPNAVCCSNGKHCCPSGHVCSEGGCVKAN---KQIEAYQLTTKL-----VSLESVRCPDHVSECPDGNTCCKLSSGQWGCCPLPKATCCSDGVHCCPNGYTCGSGGY--CTKGSEVIKASIKNAAINNL 638
            M+ ++  ++     ++   +CP    CP     CC D     P G     C P    +  +   ++  P +  +                 C++G +C    SG   CCP P+A  C D  HCCP G+ C+A       RS N                         ++G I C D +  CP+ STCC   DG + CC  P ASCC D +HCCP G  CD     C   +    +  K PA+++     +               V C  D +  C DG TCC +  G YGCCPM  A CCSD  HCCP    CD+    CLS       +    PA+   +        KC D +  C D  TCC L SG  + CC F  A+CCED +HCCP GFTC +  G C      V   E  P  L  P  +       C + S CPS  TCC+L +G++GCCPIP+A CC D  HCCP    C  +G C  G   +   +K      S+   +D+ C+    C    TCC S  GS ACC  P+AVCC + +HCCP+G+ C+    VKA    K++ + Q  T L     V ++ V C +    C D  TCC+ +   W CCP  +  CC+D  HCCP G+ C + G     + +    A +++ A+  L
Sbjct:    1 MWTLVSWVALT-AGLVAGTRCPDGQFCPVA---CCLD-----PGGASYSCCRPLLDKWPTTLSRHLGGPCQVDA----------------HCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADGRSCFQRSGNN------------------------SVGAIQCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCCPHGAFCDLVHTRCITPTGTHPLAKKLPAQRTNRAVALSSS------------VMC-PDARSRCPDGSTCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVCDLIQSKCLSKENATTDLLTKLPAHTVGDV-------KC-DMEVSCPDGYTCCRLQSG-AWGCCPFTQAVCCEDHIHCCPAGFTCDTQKGTCEQGPHQVPWMEKAPAHLSLPDPQALKRDVPCDNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEGQCQRGSEIVAGLEKMPARRASLSHPRDIGCDQHTSCPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTCN----VKARSCEKEVVSAQPATFLARSPHVGVKDVECGEG-HFCHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQL 592          

HSP 2 Score: 285.034 bits (728), Expect = 3.342e-87
Identity = 194/549 (35.34%), Postives = 267/549 (48.63%), Query Frame = 0
Query:  161 VSFNLGDIYCGDERTCPEGSTCCATPDGEYNCCSFPGASCCNDGIHCCPQGFTCDSEKQECRRNSERVAMQHKFPAKKSLPPANIKEECKKQPIDEKPKVVECGTDKQYFCLDGETCCLISPGVYGCCPMVEAVCCSDKKHCCPHGATCDVAHGTCLSSSGEKVQMRAHKPANVHKEYPEPKTNQKCPDGKTECADNNTCCELTSGQGYRCCKFKDAICCEDGLHCCPTGFTCSAGGLCNNATVKATESKPMTLYKPMYK----ECKDGSECPSYSTCCKLNNGKYGCCPIPDATCCRDGVHCCPNHMRCD--DGHCHHGDIRIPATKKFQSIQS-------NQDVSCNDGNVCSENSTCCHSEDGSSACCPAPNAVCCSNGKHCCPSGHVC-SEGGCVKANKQIEAYQ-LTTKLVSLESVR---CPDHVSECPDGNTCCKLSSGQWGCCPLPKATCCSDGVHCCPNGYTCGSGGY-CTKGSEVIKAS----IKNAAINNLKSVACPDGTSQCPDGSTCCKLSSGQYGCCPLPKATCCSDGVHCCPNGY 686
            +S +LG   C  +  C  G +C  T  G  +CC FP A  C DG HCCP+GF C ++ + C + S   ++                              ++C  D Q+ C D  TCC++  G +GCCPM +A CC D+ HCCPHGA CD+ H  C++ +G    +    PA          ++  CPD ++ C D +TCCEL SG+ Y CC   +A CC D LHCCP    C    + +    K   +  +    P +     +C     CP   TCC+L +G +GCCP   A CC D +HCCP    CD   G C  G  ++P  +K  +  S        +DV C++ + C  + TCC    G   CCP P AVCCS+ +HCCP G+ C +EG C + ++ +   + +  +  SL   R   C  H S CP G TCC    G W CC LP A CC D  HCCP GYTC      C K  EV+ A     +  +    +K V C +G   C D  TCC+ +   + CCP  +  CC+D  HCCP G+
Sbjct:   53 LSRHLGGP-CQVDAHCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADGRSCFQRSGNNSV----------------------------GAIQC-PDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCCPHGAFCDLVHTRCITPTGTH-PLAKKLPAQRTNRAVALSSSVMCPDARSRCPDGSTCCELPSGK-YGCCPMPNATCCSDHLHCCPQDTVCDL--IQSKCLSKENATTDLLTKLPAHTVGDVKCDMEVSCPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDTQKGTCEQGPHQVPWMEKAPAHLSLPDPQALKRDVPCDNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEGQCQRGSEIVAGLEKMPARRASLSHPRDIGCDQHTS-CPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYTCNVKARSCEK--EVVSAQPATFLARSPHVGVKDVECGEGHF-CHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCPAGF 563          

HSP 3 Score: 256.914 bits (655), Expect = 1.219e-76
Identity = 174/480 (36.25%), Postives = 229/480 (47.71%), Query Frame = 0
Query:  240 LPPANIKEECKKQPIDEKPKVVE------CGTDKQYFCLDGETCCLISPGVYGCCPMVEAVCCSDKKHCCPHGATCDVAHGTCLSSSGEKVQMRAHKPANVHKEYPEPKTNQKCPDGKTECADNNTCCELTSGQGYRCCKFKDAICCEDGLHCCPTGFTCSAGGLCNNATVKATESKPMTLYKPMYKE-----------CKDG-SECPSYSTCCKLNNGKYGCCPIPDATCCRDGVHCCPNHMRCDDGHCHHGDIRIPATKKFQSIQSNQ--DVSCNDGNVCSENSTCCHSEDGSSACCPAPNAVCCSNGKHCCPSGHVC--SEGGCVKANKQIEAYQLTTKLVSL-------ESVRCPDHVSECPDGNTCCKLSSGQWGCCPLPKATCCSDGVHCCPNGYTCGSGGYCTKGSEVI----KASIKNAAINNLKSVACPDGTSQCPDGSTCCKLSSGQYGCCPLPKATCCSDGVHCCPNGY 686
            L P      C +  +D+ P  +       C  D    C  G +C     G   CCP  EAV C D  HCCP G  C     +C   SG                        +CPD + EC D +TCC +  G  + CC    A CCED +HCCP G  C    L +   +  T + P+    P  +            C D  S CP  STCC+L +GKYGCCP+P+ATCC D +HCCP    CD             T     + ++   DV C+    C +  TCC  + G+  CCP   AVCC +  HCCP+G  C   +G C +   Q+   +     +SL         V C D+VS CP  +TCC+L+SG+WGCCP+P+A CCSD  HCCP GYTC + G C +GSE++    K   + A++++ + + C   TS CP G TCC    G + CC LP A CC D  HCCP GY
Sbjct:   32 LDPGGASYSCCRPLLDKWPTTLSRHLGGPCQVDAH--CSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADGRSCFQRSGNNSVGAI-----------------QCPDSQFECPDFSTCCVMVDGS-WGCCPMPQASCCEDRVHCCPHGAFCD---LVHTRCITPTGTHPLAKKLPAQRTNRAVALSSSVMCPDARSRCPDGSTCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVCDLIQSKCLSKENATTDLLTKLPAHTVGDVKCDMEVSCPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTCDTQKGTCEQGPHQVPWMEKAPAHLSLPDPQALKRDVPC-DNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEGQCQRGSEIVAGLEKMPARRASLSHPRDIGCDQHTS-CPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGY 486          
The following BLAST results are available for this feature:
BLAST of TCONS_00011742-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRN1.834e-8932.49Granulins OS=Homo sapiens GN=GRN PE=1 SV=2[more]
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