XLOC_034755 (gene) - C. hemisphaerica

Overview
NameXLOC_034755
Unique NameXLOC_034755
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_251:555805..562668+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034755 ID=XLOC_034755|Name=XLOC_034755|organism=Clytia hemisphaerica|type=gene|length=6864bp|location=Sequence derived from alignment at scaffold_251:555805..562668+ (Clytia hemisphaerica)
gattttttatttcgatacTTCAGTGGTTGATACCATTTTATCAATAAATG GTATGAGTTACAAGGGGGCAAAAggtttgtacacatttttttacaagaac attgaagccttcggatgttatgaactttttgagttttaagcctattCTTA ACCATGTTctgattttcaacattttttgagcatttttgtccattttccta agaaattgggtattttagaATCCATTAAGCCTTAAAGTGTTTATTTTTCC GAACTATGTCGAACACGAATGGGAATTCTAATTCCTTCCAATTTATCGGA AGATTcgattcttaaaatgttcttatttccacAATTTGAAGGAATATGTT TGTGTGGTTTCCTgggggctcccccaggggctggcgtgacgcgtaaatga cccttttttctgtcgtgaatacgtgaattggactttgtcaacgcgtgaat acgtgaattgtgATATcggcgtgaacgtgaaaataagattttaccagcgt gaattcgtgaatcgagattttgagcgtgaacgtgaaaagcaaatattgtc taaaacaaaactgaataaacctaaatatgtgaaattttcttgctcgcttc gctcgcataatcCTTGATATCATATTGACCTATTGCCAttgtaaagttat tcaaaataatcaaaaattgaaacagaaacaaatacttttccttatttttc taagGGCGCATTTTTTGATGCAAATATTGCATCCAGCGAGAGTGTTTTGA GCCAAAACCAAAAAgtctaaatgagaaaattttcttcgtcggcgCTAATG CTGGTCGTCTTTCTGTAATCGCTTATATTGTTACTAAATGCAGTACACAA TATGATACCGCATGAACTTGGAGACAGTGAAGGGTATTTGGTTCTTCGAT AATTTACAAAAGTAGGTAGATAGTTCTAAAAACTTTTATATGATTGCATC ATCGaacattcagaaaaaaactcttGTGACGCCGCACCGTGTAAGGCAGG TACGTcactcgccgtaccagatttgtaccagtaaatggtcagtgttgaaa ataatcaaagattctgaatgaattgtttgaccaaacaaggcatattaGGG TAACATTAGTGTGTTAAGGCCGTTTTCTCAGCAATGAAAGagtgaaaatt gtcaaaaaattttcgcgctcgcttcgctcgctttttccTTTCCACAGCTT TTCTTCAATGAGACAGGGGGGCAAACTTTGGAATTTTCGTCCTCTGGTTG TACCACCTTTTTGAAGCTCGCGCTTTTCCAGACCATGAATTTGAGCCAAA CCTCGATTTAAATtgattctcaaaataaaatatatttagggCCTGCGACG AAGAAAATCGGAGGGAAATCCTTAAAGCTAAGGCTTAACTTTGCACTTAC CTcccttaaaaagcaaattcaggCAGGGTTTATACCACCGTACGCCAGAG AGGTagttttttgtaactttggcgTGATAGACGTGATAGACAGACCTTAA ACATTGCCCTATGAAAGCTCCAATAATTGTAAGAGGTCTTAATAGGTCGA CGctgtcgagaataaggtcaaaaaactgcagaaaacgtTATGTTGGccat aaaaaggtcaaatttagcccaataaggtcacaatcgtttaacaaaagaat taaaagcaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttcgcgcgtgaata cgtgaattggcaaaaaattttgcgtgaatacgtgaattgagggtcgactg ggggggGCCTCTTCCTGGAAAATATAGGTGTTTTAAAGTTCGCAAAGCCT TAGAATATGTTTTAAACTtgatcttaacattttggccatcgaagccttat gttcttatatagttttttcttataaaaaacgtgtagttaaagaaattatt ggggAGTAAGACGATCGTGCTTTCAATTTCTATATTTACACCAGTAGGCA ATGTTTTTTTCCCAGCGAAACACACCCTCCTCTCgaacccactgggaccc cactGGCACTGGAAAATAGTGGCCAAAATATCTTCCCTACTGGAAAATTA TACCCCAATCCCCCCTAAAAGTATGTAATCGAATAAACGAgacctcactg caaaatatggGGCTAATCTTACCATCTccgttgaattttctgactcaaaa aaaaatgaaattctgatCCTCAGTCATGAAAAAAGGAGAATGTACGTTAa ttcccatcgagttttggtccgtaaTCTTTACCCCCGGTGGCTaaaaaaaa tcctactgggtctgtgagaagggagtaaAGCGAATAAAGAACACTGCCTT AGAATAATGTTTTTAGCCTTTGGTTATCAATTGAATGAGCTAAAATATTC CCTTGTCACAGCCCAAGAATAAACCCGACGAAACCCTAGAATATAAAAAA TTCTCCATAACTATATAAAAGTTTCAATTCTTTATCGTTTACAGCACATT TTGTAGTATAGCATGGAAACACCAGTTAGCAATGGACAAACCACTAACCC TGCTGTTGCCAACCTcccaaacaaaagaatttctgatAACGTCATTCAAA AATACCTTTACGGCTACAAAGAAATGAGGCTTGTTTCGTCGGAAGAAGTT TTATCCACTCTATTGAAAGGTAAGTTCTAGTTTCTGCCCTGTCTATTTTG TTGGTTAAAGTAGGCTAAAAGTGGGCAGAACGTTGGGAATTacaatcttt gcttgaaaaaggttgaaagaagtcattgttTTGAGGTCAAATAAAGAGAg taatgcattgactttagacagccaacgTTCTGCCAACTTTCTGCCAACTT TAACTAACATTTAGAATacgcagggcgaaaagtggacCGTCTTAACCAGA GCTAAACGGTTTAGACGGACAACTTCTCGCCCACTTTTTACCTACCGTCC TGCTTCTTAAAAGAAGCAGGTCAGAAAGACTCTAGTTTAGACAATCCTGT CCCACAGCCACGTCGGAACTTTTTTCCACAGCGGGATGAAAATTTCGTGA TTTATTGTTttcaggttaaaaaatccagtgctGTGGGGATTGCTTTTAGA GCACAATCTTTTCAATTGAATATCTAATggggatgaaaacaaagtcttta CAATCTGGGCTGAAATCGTAGGGTATTATTCACATTGCGTTATTCCCACG AAAATTTGGCCAAACTTTTCAGTGGGGTGGGGGTTCCACCGGacgacaca ggggtgtaatcatattttttagttttacacatcctttttattttcatcat gAGAGGTCCTGTCGCAGCTCCTCAAGAATTGAATCCTTTTTGAATGTCTT AACGTCTAATTCGATCATAGGTCATAGAATTACTCCCTGTTATTCATCtc atacagtcaactctctaattcgaacctctattattcgaatttttctgtaa aatagtggtcccctcagctagaaAGTAGTATAAATTACTCTTTGTAATTC GAAAAGAAACTTCCtggccccttgaagatcgaattagagagagttaactG TAGAGTATCCTTGATGGAAAAAGTATATGCTCGACTTTgaaaactttcat tttacagGTCAAATACGAAAGTGCACCAGCCTACCGGAAACACCACCTCT ATCACCACGTAAAATCAGAACACCTGATGAAATATCATTATGTTCGTCAA GTCTACCCGGATCGAAATTTGGAGCATGCGCAATAAAGAGGATTCAACAA GGCACTTGGTTTGGTCCTTTCGAAGGGAAGTTAGTGAGGACGACCGAGAT TTCATCCAGTATGAACACAGACCACATGTGGGAGGTATGTTTAGCAAGAc taatttgattagttgttttacgggcccgaccgaccttgaaattacaaaaa tcgaaaaaaaactcatttttgtagtatatttttattttcattgctttaca gactgccaaattttcaaaattttggttgtttttccaaggttttgagaatt tattATTCATGATTTGAccttttgtgtctttttattttctatttcgcatt ttcgtcaagatgtagtagtttttactacctttttagaagattttatagtt gaaattctacttttatttttattttttcgccgatcGGCCGACCCTcattt ttgggtagcttggcccgtaaaacaacaaattaaattggcctcgcctttTA AAATTGGAATCTCCAAAACTCGAACATGCACGGGGAAcaatttgttcgat ttaaggaaatttcaagttatagAGTAAGGTTTACAAGGCACTGTTAACTG AAGGTcgataaaacttgttcgagttaaggaaacaaTCCAGTTATAGAGGT TGAGGAAATTTTTGAAGTAATTTGAGGAAAGATTGAATTAAATTCATCTC GGTTCTTTACATCCTAATGCGGCTTCGGTTAGATAATGTAGTTACAACAA ATACTGTTAATAATAATTAGGTTAGGCCTTAAAAGCCGGTATATGGTTTA TATTATTGATACACCTGTTAGACTCAGTGGACAGGTAGGTTTTTTTGTGC TGGCATTTATTATTTATCCTGAAAATAAGACCAAGTCGCGAAAAAGCGGC Tttgtcattcattcattcattcattcattcattcattcattcattcattc attcattcattcattcattcattcattcattcattcattcattcattcat tcattctctTTTTACTCTTTTATCACCACAGATCTTTCACGACGGAGAAG TCAGTCATTTCCTTGACGGTTTTAACGAAAATAACTGGATGGCTTTCGTC CGCTGCGCTCGCCATAAGAAAGAACAAAATCTGGTCGTTTTTCAATATCA CGGTTGTATTTATTATCGTTCAACGAAAGATATTTTGCCAGGAAATGAGC TCTTGGTTTGGTATGATACAAAATATACACAGCTTCTTGGTATACCATTG ACTTGGAATGATAACAGAGGTTTGCATACTACACCTCTGTTTGCTCTGTG TCCCAGTGGAATTTTTTCCCTCAGTGGAGAtcaaaatttctatcgaaatc ctcATTGGGATGTatattctattgtttcaagctCCAAAAAGGGCATCATA TtaaggatggttttggagtgtaaaTTTTTCCATTCGATTTCTATAAAAGA ATGAAATTACAGGGTATACCTCCTGAAGTGAGTTAAAAATTCAGCGTACT TTTTTCACCAAGGGAGATTTTTTGGCTGAGCTTTCAATCtccactgggtc tgtgacaaGGTGCGGTTTTATGTAATTTCCGAGAAGAGTCTGATTACTCT GCGTTGGCACGTAAACACTATAAAGGCCATGGCTCTTTAACAGAATCTGC CCTGTTTGGATCACCGCTATGATCTTTTTCTTCCAGATTTggaatgaata ttaaatgagcttttcagTACAATGATtaagcgaccgtagtacagtggtag agcatccggctacggttcgcaaggttgtgggttcaacccccagccgggtt ataccaaagattcccaaaatggtacttgattcCTCTCTGCTCAgtaacta agagaaggatcaagggtaagtggagaaatccagggagaaagagtggcgcc ctcccctaccttcgggtagatagctatcgaaagaggagccttcgggtcgc ctccgactgcggtcgcagacttacttacaaTGATTTGCTTAAAACTAAAA CAATCACACCAAAATAAACGTCAATATCAAACATAAACATAAGAGGCATT TTAAAAACCACAAGGTTAGTTTGAACAACCAGGCCATGCTTGTGTTATAA AATATCAACTTTATTCCCCACAGGAACAACAAGCAAACGAAAGAATTCAT TGAGTATTTGCACGGACGATCCATCAACACAACAACCACAACAAACAAGA CGAAAACGTGAAAAAGTCACACCACTATCATTGTTACAGCAAATCGACTA CAAAACACAGCCTCCACGTAAAAACGAACTCGAGTTTTTAGCAAGTCTGA TTGCTAAGAATGCTCCATCTACACTATCAACAAATTATGAAAACTCTCCT TTCTTATCGAGGAAAGATCTACCAGTTCCGCCCTCTACTATCCGCTGCGA CAAATGCTATTTCTCTTTTCCCAACAAAGAGCTTCTCATAACACACAAAT GCAGCGCAATACCTTGGATACCACCACCTCCGCCATCAAATCTAAGAGGT GGACCACCCGTTGAGAAACATCAACCTCTACACCGCCCAATACACGTTAA TACGCCTTACGCCCCAGGAATCGACTTCACGCCAGCTTCAGCCCTTAATC CACATTATCACAGTTATTATCAAAATCTTGCGCATGCGTACCCTTCACCT CCTATGGAGCCGCCAATCAAGAACTTTGGACCTTATAAATCTAGTATTTT Accattaaaaaacttttaaaatagattttgtttgaaaaatatttaacctt atcggggaaaaagtTGTCGGGGGAAAGTGCCGAAAATTTTTCACTGATAT TTTATCCCAGACCAAAACTTTTATACCTAAAATTTTACGCGGTAACTAAT ATTCGAATCTAAAAACTGATTATAAAATCCTGACATTTTTTTCCCGATAA GGTAAATCTTTATTGCATCGATTTTCTAAAACAATAGATAGAAAGCTTGA TTGTGATTTTAATTGTCCACCTGATGAGGGGATTTCTGTTGCCTCGCAGA TAAGAGGTTGTTCTAGAAAAGAATTTGTCTTCTTATGAATCTTGTAAAGG TTTTATTAGCGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055174TCONS_00055174Clytia hemisphaericatranscript
TCONS_00055175TCONS_00055175Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055174-proteinTCONS_00055174-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:555805..562668 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.68 5.74 1.74 0.92 1.66 1.18 32.64 34.62 7.53 7.49 6.58 5.78 12.17 10.9 7.7 18.37 12.8 12.78 1.43 0.85 7.52 8.47 11.14 12.25 12.51 19 2.05 1.84 3.74 4.13