TCONS_00055174-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055174-protein
Unique NameTCONS_00055174-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length405

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055174-protein ID=TCONS_00055174-protein|Name=TCONS_00055174-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
METPVSNGQTTNPAVANLPNKRISDNVIQKYLYGYKEMRLVSSEEVLSTL
LKGQIRKCTSLPETPPLSPRKIRTPDEISLCSSSLPGSKFGACAIKRIQQ
GTWFGPFEGKLVRTTEISSSMNTDHMWEIFHDGEVSHFLDGFNENNWMAF
VRCARHKKEQNLVVFQYHGCIYYRSTKDILPGNELLVWYDTKYTQLLGIP
LTWNDNRGTTSKRKNSLSICTDDPSTQQPQQTRRKREKVTPLSLLQQIDY
KTQPPRKNELEFLASLIAKNAPSTLSTNYENSPFLSRKDLPVPPSTIRCD
KCYFSFPNKELLITHKCSAIPWIPPPPPSNLRGGPPVEKHQPLHRPIHVN
TPYAPGIDFTPASALNPHYHSYYQNLAHAYPSPPMEPPIKNFGPYKSSIL
PLKNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034755XLOC_034755Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055174TCONS_00055174Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001214SET domainPFAMPF00856SETcoord: 139..189
e-value: 8.4E-5
score: 22.9
IPR001214SET domainPROSITEPS50280SETcoord: 76..190
score: 14.031
NoneNo IPR availableGENE3D2.170.270.10coord: 35..199
e-value: 2.4E-18
score: 66.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..239
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 76..198

Blast
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BLAST of TCONS_00055174-protein vs. Swiss-Prot (Human)
Match: PRDM6 (Putative histone-lysine N-methyltransferase PRDM6 OS=Homo sapiens GN=PRDM6 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 1.306e-41
Identity = 91/264 (34.47%), Postives = 136/264 (51.52%), Query Frame = 0 
Query:   75 PDEISLCSSSLPGSKFGACAIKRIQQGTWFGPFEGKLV--RTTEISSSMNTDHMWEIF-HDGEVSHFLDGF--NENNWMAFVRCARHKKEQNLVVFQYHGCIYYRSTKDILPGNELLVWYDTKYTQLLGIPLTWNDNRGTTSKRKNSLSICTDDPSTQQPQQTRRKREKVTPLSLLQQIDYKTQPPRKNELEFLASLIAKNAPSTLSTNYENSPFLSRKDLPVPPST------------IRCDKCYFSFPNKELLITHKCSAIP 321
            P E+ LC+S++PG  +G CA +RIQQGTW GPF+G L+     +  +  NT H+WEI+  DG + HF+DG   ++++WM ++RCARH  EQNL V QY   I+YR+  DI  G ELLVWY+  YT   GIPL          +  N  S   +    Q   Q   K  K+ P +  + + +   P  +N      SL+ K+ P  + + +      +++ L  P ST             +C +C+ +F  + LL  H C+  P
Sbjct:  245 PREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCI----AQDENLNVPSTVMEAMCRQDALQPFNKSSKLAPTTQQRSVVFPQTPCSRN-----FSLLDKSGP--IESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNP 497
The following BLAST results are available for this feature:
BLAST of TCONS_00055174-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRDM61.306e-4134.47Putative histone-lysine N-methyltransferase PRDM6 ... [more]
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