XLOC_024249 (gene) - C. hemisphaerica

Overview
NameXLOC_024249
Unique NameXLOC_024249
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002273:24550..33433+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024249 ID=XLOC_024249|Name=XLOC_024249|organism=Clytia hemisphaerica|type=gene|length=8884bp|location=Sequence derived from alignment at sc0002273:24550..33433+ (Clytia hemisphaerica)
ctaacacaaggacaaaaatactcacaaaatggtgaaaataagaaaatgtt aagaacatttttaggcttaaaactcataatttttggatgttcctattaaa aaaacgtgcattgAAACTCCTAGGGCATTATTTCCTTCTGTAATCTTATG TTAGCACTGTATTAGGTAGTCCTCTGTTGTAATTCGAGTGTTCAATTCAC ATGATAAACAGAGAAGAAATAGAATATTCCTTTTGCGCAAAAATCGGATA CAAAAATTCCCAGATACATAACTTTTTATGCATGTTAGATTTCTCAGGAA CAAGGGAAATTTAACGGACCAAATCATGCAGCTACATTATTGGTGCTTAG CTGTTGTGCTTTTAAAACTGGCGTCATCCCAGGTAtaactttttatcttt taatcGTTTTTTTATAACATCCTTTTGCTGGAATTCCTCCATCACTCCTC CTCATTTTATTTTTGCACGTAATTTTTCTGTTTAGATTTTGGAGCCTTGT CGCAAAGATGCCTACCCAACTCACGAAAAGTGAGTGAaaacattttggtc attttgatgtctatgttatttttttcattataattacacccctgtctcag tccCCGATGGGACTTTTCGAGGGGTAATATTTAAATGACGTGGGAGtgga aatttttataattttgtcgGTGGGGTTTCAAATTCTATTATCTGGACTGG AGCTACAAAATTCTGTTGGGTCACTATGAACTGCTAATGCGGTCACTTTT TTTAGATAAATGTTTCATCAGAGAGGAAGGAGAATTTGTAACTTGTTCTC TATTTCATAGAACGCGAAAAATACAAAGATTTGCATTGAATTTGGATTTG CCCGGTGATCAGAGATGGGCAGAGATTGTTCAACCTCATACACAACAggt actacatgttttttttataagcataaaaatTTGGCTCGGTGATGTTTAAG TTGAGGACTTAACAACGTTGAAAAATGCTTATAAAGATGCTcaagcaaaa ttttagagaactttcgaaaaaaaaaattgttccaaAAACCGCCAAAAACA GGCAAAATctggaaaattcatttttcgtaggctcaggGTAATGCTTATCA CATGCTTAAGTTTTTGCCATATCTGAgtctagatatgcttataaatgcag ggcttataaaaaacatgtaatcagAACTTTCACACCATCTAACCCTCTGT ATTTTCTAGCTTACACCAGAGACTATTTTTGACTCAACTTTGCTTGGTGA TTCTTGATTGCCCTGAGTTCAGTGAAATAAACTAAAGGATACTGCCATTT AAGTTTTCACTTTGGTTTTCAATGAAATATCCATGAAAAACACATCTTTA ATGGCGTCAGTATATAGTACATGCACTAGACAATAagcagaagcagccgg cggagagatttttagaaatatgtgttcttatcttctaggagaccaaatgt tatgacctttcaattttttatacaaatgatgtgtacTGATTTCTAGGAAC cctttatcgcactatttgtctccctaaacttatcactACATTATGGTTTG ATGTGCtctaaaatttaggaaaaacagtttgccaagataaacctgtaaga tatttgtttttctccacgcaacggattagaataggtggattaagaactca tagaaaacactcctcgttaggttatcaaacttttttacgagtttgctagc aattaaaacttgataagttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNATTTCTTAGTTATAGACCATACGTTAATTTTCAC TTATCTGAAGATTGCCATtgacaaaagattaaaaatttacattaaaactg gTCTAGCGTTTGTTGATGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNataaattggaaaattgttctt ataaaaacaatgaaaaaactaaacgaggagtgcgcagagtcatttacaga tttttcttgtaacaatgagaagacaatggatctctcatgggagcaacgag agaagttaatccacctattctaatccgttgctcCACGagagatgtgttct gaaaatttcaagggtCACTAGGCAACAGCATTACATCAATTTGCTTAAAA GATGTGTtatgaagctttctagggttgcctagacaacaagaacacgttag atgacATTGATTATACCCTTGTCtcatcagaacacatcattatttctagc tgattaattttcgaagatctgatcagaacagataaaaatttctagctgaa atatgctctcagaacacatcggaaaaaaaggtcgcctcgccggctgcttt cgaatAAGCTATCGACGAAGTGAAATTTCCAACAACAAATATTCTTAACA ACAAGTATTTTAAATTATCAAAGACATGGTTGTATAGATTTGCTACAATT TAGGTAATTGCGAAAACTGTAACAAATATACACGATATATAGAATTCCCC CAgtaaatttttatctttttatctcTTTATAAGGGTTTGGATGATTTTTG CGTTCTCCATTACTTTTTAGATCAAGAATGTCATTCAAGTCATCAAAGAT CTTGTTCCTCGaaaagtcattgaaatcatcaaCGAAATTTTTGTAAGTGA TAATACAGTGGAATTTCCAATCTTCGTATTTGAACGGTGGACGATATTTC TATCCTTCTTCTTACTAGTGCTTACCCCCCCCAGttggcacaaaacgttg tttcaacgttcatctaacgttgtatggacgttgtgaacattaggtggacg ttgaaacaaccttGCGTCTTCTTGTTTGCTAACTTATTAGTTTGGTATGA AaacctatttttcattttcagccgATCCTGATGGTACGGATACCACAACC TTATGCTGATGAAATTCAAGGAATCTCCCGAGCAACTGGAATACCATTAG GTGAATATGAGAAGACCTATTTCTTGTTTCCAATGGGAATCTCAAACTTG TTTCTCAAAAgttatttttccctttttgtTAGGAATAGGAGAGTGGTCTT CCAGCAATctagacacccccttctcacagactcggtAGGAAAATGACGGA CTCTGAAACTCGACGGGGATTGATAtacccatattttttatggctgggga tttcaattctttttttttcaagtccgaaaattcagtggggacgagaaaaa tattgaatattttgcagtgaggattggttaaTTTGATGATcttcagtgga gacaaaaattggaggataattttccaccggggacgatattttggccaagg GGCCaaaaggggtcccagtgggtctatgagaaaggggtgtatctATACTC AATTGGTATTCATGCACATAACATTCTTATATTCCCGAAGCTGCTCTACG CTTCTACAGAAAGAAGACTGATAGCTTTTAggaaaaaatcaataatttct aacaattttttttcacttccaGGCGAAATAATCTTGTACAACATATTTTA CGAAATCAATCCTTTCTGTACTTCGATCGTTGGACAAGATGAATCTGGTA TGATTACTCGACTTCCTTTCATACTATAAGCAGCTCCTAAGCCTTAAGGC TGGTTTTGCGTTGAGAACAGcctaattttcttttaaaattggtaATTTGC TTATTGAAACGTACAAAGAAttagtttgtataaaaaacgtttaaatcAGA AAAGAGCATCTTTGGCTTTACTTATCCCTACTGTCATACAGACTTGTTTA AGTAATGAATATTATATTGTNCGGGGATTGATAtacccatattttttatg gctggggatttcaattctttttttttcaagtccgaaaattcagtggggac gagaaaaatattgaatattttgcagtgaggattggttaaTTTGATGATct tcagtggagacaaaaattggaggataattttccaccggggacgatatttt ggccaaggGGCCaaaaggggtcccagtgggtctatgagaaaggggtgtat ctATACTCAATTGGTATTCATGCACATAACATTCTTATATTCCCGAAGCT GCTCTACGCTTCTACAGAAAGAAGACTGATAGCTTTTAggaaaaaatcaa taatttcTAACAATCTTTTTTCACTTCCAGGCGAAATAATCTTGTACAAC ATATTTTACGAAATCAATCCTTTCTGTACTTCGATCGTTGGACAAGATGA ATCTGGTATGATTACTCGACTTCCTTTCATACTATAAGCAGCTCCTAAGC CTTAAGGCTGGTTTTGCGTTGAGAACAGcctaattttcttttaaaattgg taATTTGCTTATTGAAACGTACAAAGAATTAGTTTGTACAAAAAACGTTT AAATCAGAAAAGAGCATCTTTGGCTTTACTTATCCCTACTGTCATACAGA CTTGTTTAAGTAATGAATATTATATTGTAATTTCGTAATTCTTTTCAGGA AAATTATTTCACGGAAGAAATTTGGACTTTGGCTTGATGATGGGGTAAGA ACGTGTTTTTAAGAGGTTCTCAAAATATGTTTTCGCCCTTGTCCATTGGT CCATTCTATTTGAATAGCATACCACAGTGAATCttaaaatagacattgat ttttctgtttgaccgaaattcaatcccatcacccttcgCGTTAACTACGC CTGCATGCAAATTACACtcaactaaaaagaaaaagtaatgactttcacga ctttttaattaagacgaaaaggattgtgggattgattttcggtcaagcgt taaaagtaataattatgacgtttgcataacggTGTGCTATTTCCGTTCTT TGATTTAGATGGGACAATGCTAACAATACATGGATTTTAACAGAACGATT GAGAGATGCGATGATCATTGTAGACTTTCAGGTATCATTAAGTTTTCGCT TGTCCTTTAATAACGAAGAAAATCCAGAATTTTGTGAGCTTTTTTATCCT AAAAAAATGACACTTCTTTTGCCTAGGTATACTCCTTACTCCAAGAGTTA TCCTTACAACGCCACTGATTGATGTACTGTATTAAAGGAAATTCGACCTT TACTACAAAGAAAATTGTCTCATTTCTGctcatttttcatttctattGTA TTACGATTATCTAGCGTGATGGAAAGACAATTTACAGTGGAGCTCATTTT GTTGGCTACATTGGCATGCTTACTGCAGTCAAAAAGGTATCCTTCCTTAA AATAACATTCCGTCTGATATTGTAGAGAAAAATGTCCGAAATTTCCGATA TCCCcgctggcacaaaacgttgtttcaacgtttatttaacgttcagaACG TCCTGATAACGTTAGATGAGCGTCGAAACAAGGCTGTGTGCAAGCTGGGA TCgtatttaaaaagtatttcaagaCCATGAAAAATTTCACATGGAGGTTT TCCTTTCTAGCTTTTAGATTCCAATTATTGTGTAGTTTCTTTTGTATTTC GCAGAACGCTTTTACAATGACAATCAATGCACGTTTTGGCCTTGAAGATA AATACATGGGTAAGTTCGAATCATCCTATCAGTGAAAAATACTCTTGTGA TAAATATCAGGTTAAAGGATaaggggggcactcatatggtccgacccacg gcatgtggtaggtttttcgagaccctcaAAATGCACTGTAGTACTTCTTT TAGCTGATTACACTGTAGGGGTGTGTTTTCGAACTGCTGAATCGCCAGTC TGACAGCAAAAATCTGATGTacctttatagttttgactcgcactaatttt gatttgttttgcacatcaatctacactgtaataaggGTGAGAAGCTATCG GTaaaatgtactgtaagggtccgattttgaatgcctattttttggcggca catgccgtcgtttggaaatcgagtgcccctccCCGGGTTTTTACTCGAAT ATTTCCGATTCATATCAGACATACATATGTCATATTAATTCAGGTGTCcc ctattgttttattttgtttcattcTTGTGCTGACTCTTATGCGGTCTTAC TTCAGTGAGAGAGGGGTTGATACCACGAACAATATTATcgtattttcaaa ataacaggtatattacaatGGTTAGATGGACAATCTAACGGACAGATGGT GGCTTTCTTATCTAGACAAACTTTCGAAAATGCTACAAAGTATGGTGTTT ATTGAGAATCTTTCAAAGTGTTTATAAACCTGTTAAACCTTCAGCGAGTC GTATCGGATTGTTAAACCATTAGATACAATCTACCAGACCATATgataat gatgtaatgtttcCAAATATGGCCATAAAATTCGCTAGAATGCTTGCGTA ATGTGTTTTTTTGTCGTTCTGATGGTCTGGTATTGTTAGATAAACATTTC TCGTTCAATATCTTTTTTACTTTACGAAACCTTGGCTAATTATTAAAATT AGAACAATCTCTTACCATAACCGTACCCTCTAGTATCTTTCGTGAGCGTT ATCGGAATCATCAAAGCCGAAAAGATCGTCAAAGATGGGCACAAGCTCCA AGTTGAATAGCACCTTGAAAACTTTGTTAATTTCCACTCTTTAGTTACGA CTCAGCCATGGAGACTTTTTCGAATGCGGAACTTGTGGCACCCATTTATT TTATCATCGGTGGAACAAAGAAAAACGAAGGAGCTGTGATTACTCGATCA CGTACCaaacctgatgacgtcatgacgtaattgctttgtttttttatata gaCTTACGTTCGGTCTTTTAGCCTTCTTAGGTTCCTCTGAAGGACACATT TTATGTCCTTTCTAAGGACTAATACGAGCCAGAAAAGTCTCTCAATTCTT TCGAAAACTTGTCTTTTATTAAGAGTCACATGTTCAATAGTTTTGTATCC AAAAGGtctagattccaaaatcaaatcCGTAAATACCCAACACTTTCCAA TCATAGTACCCTCCCCTTGCGTTTGCCACGTGAGAACATCGGCTTTCAAA ATTTATCCAATATGTTACAGTTTTTTCTCATAATATCacaatctttgatt ttttttacagattGGAGAGGAACAATTCATGGTACCTTTTACAAACGAAT TATGATAACTGGAAAAAACCTTTATTTGTTGATGACAGAAGAACTCCTGT AAGTTATACTTGATTTGATAGCACTAAACATGATCGTCCAATCTTTGTTC AGagacaattttttttcctatcAACTTTATCGACGGGATGAAGNTGATCG TCCAATCTTTTGTATTATTTCTTGTTCAgagaaaatattctttttccTAT CAGCTTTATCGACGGGATGAAGTAGAGTTCTTGGCTTTTTGGCTCTTCCg aatcatttctctcatttttctTATCATAGGGCAACAAATGCATGAAAGAG CTAACCCAAAAGGTATTGAATCTCTTATCCAATTTATTTTAAAGCTATAc aaattatgataaaatctGATTGTAGACTGCCAATATACGATCAAGTGAAG TTTGGCATCGGAtacttttcatttctttatcgCTCTATTTGTTTAATGAT AAGTCGTAGATTTCGCGATAAAATCTAattcgatcttttatcgatcatTT TAGGGAATGAATTTCAAAGGATTGTTCAACGTTCTTTCAACCAAACCCAA CTACaataaggtaaataaaattGTTCATTCAAATTTCTTCCATACATCAA CGGTTGTTTGAAAGTCTTGAAATATACATTTGCGTTAATGGATTACTGAT ATCAAGCTTGTGTATTCGTTATATTCATGACTAATGGGTTTTACGGAAGT ACCCAAAAAGAATGAGTATTTtccactaattttgaatttaaaaaataaaa ctagaAGTAAACGCTCGGGCTATTCTGGTTGCTTTTCATATAAAACTTTG CATCATGAATAGGATTTATGGTAAAACCATCGATGGaaaaacttttactt tttttgcgtTCACAGATGACAACGTACACAGCGCTTATGCAAGTTGATGA AGGAACTCTTGATGTTTATTTGCGAGACTGTCCAGATCCATGTTATCCCT GGTGAAGTAGACGAACGCATCAACAATCAAGAGAAATGGCAaactcgttc cctgcgtattatcagctttttgacgCCTACTGATATAAGCGCTGGATAAT ACCCTGATATTGTCTGGTTTTCGAATGCAAAAGACTACCTAATTAAAAAT CAAACGTCAGATATCCCTCTCAGTGACTGAGCATCTGGCCTACAcaaggg tattctctggcgtctattagtaacgtaaataaagcctggaatacactgGG ACGAGATTGAAGAAACGGAACCCCTTTCAATTCTGAATACAAccttaatt tgttgtttttttttgaatttttttagatattcGATAATTTTTGTAAATCC TTCTTGTAAAAAGGAATTTAGATATGGAAATTGTATAGTGAAAATATAAT TTATGAACTAGTAAAACCCAAAATTTAATCACTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040026TCONS_00040026Clytia hemisphaericatranscript
TCONS_00040027TCONS_00040027Clytia hemisphaericatranscript
TCONS_00040028TCONS_00040028Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040028-proteinTCONS_00040028-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002273supercontigsc0002273:24550..33433 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ASAH1acid ceramidase isoform b Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3 0.29 0.2 0.5 0.83 0.31 0.79 0.75 6.46 5.1 5.74 2.33 16.54 22.69 13.26 11.99 16.14 17.3 33.7 23.69 33.21 33.22 31.39 35.69 52.75 33.32 7 12.12 148.7 138.89