TCONS_00040028-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00040028-protein
Unique Name	TCONS_00040028-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	396

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00040028-protein ID=TCONS_00040028-protein|Name=TCONS_00040028-protein|organism=Clytia hemisphaerica|type=polypeptide|length=396bp
MHVRFLRNKGNLTDQIMQLHYWCLAVVLLKLASSQILEPCRKDAYPTHEK
TRKIQRFALNLDLPGDQRWAEIVQPHTQQIKNVIQVIKDLVPRKVIEIIN
EIFPILMVRIPQPYADEIQGISRATGIPLGEIILYNIFYEINPFCTSIVG
QDESGKLFHGRNLDFGLMMGWDNANNTWILTERLRDAMIIVDFQRDGKTI
YSGAHFVGYIGMLTAVKKNAFTMTINARFGLEDKYMGILQWLDGQSNGQM
VAFLSRQTFENATNYDSAMETFSNAELVAPIYFIIGGTKKNEGAVITRSR
TKPDDVMTLERNNSWYLLQTNYDNWKKPLFVDDRRTPGNKCMKELTQKGM
NFKGLFNVLSTKPNYNKMTTYTALMQVDEGTLDVYLRDCPDPCYPW

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_024249	XLOC_024249	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00040028	TCONS_00040028	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029130	Acid_ceramidase_N
IPR016699	Acid_ceramidase-like
IPR029132	CBAH/NAAA_C

Vocabulary: **Cellular Component**
Term	Definition
GO:0005764	lysosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006629	lipid metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0005764	lysosome

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.60.60.10		coord: 145..381 e-value: 6.8E-6 score: 25.1
None	No IPR available	CDD	cd01903	Ntn_AC_NAAA	coord: 136..380 e-value: 2.3935E-100 score: 299.573
IPR029130	Acid ceramidase, N-terminal	PFAM	PF15508	NAAA-beta	coord: 53..103 e-value: 3.2E-10 score: 40.1
IPR016699	Acid ceramidase-like	PIRSF	PIRSF017632	Ceramidase	coord: 14..396 e-value: 6.8E-124 score: 411.2
IPR029132	Choloylglycine hydrolase/NAAA C-terminal	PFAM	PF02275	CBAH	coord: 145..381 e-value: 1.5E-17 score: 64.1

Blast

[Close]

BLAST of TCONS_00040028-protein vs. Swiss-Prot (Human)
Match: ASAH1 (Acid ceramidase OS=Homo sapiens GN=ASAH1 PE=1 SV=5)

HSP 1 Score: 350.903 bits (899), Expect = 6.608e-119
Identity = 158/367 (43.05%), Postives = 242/367 (65.94%), Query Frame = 0

Query:   38 EPCRKDAYPTHEKTRK--IQRFALNLDLPGDQRWAEIVQPHTQQIKNVIQVIKDL----VPR-KVIEIINEIFPILMVRIPQPYADEIQGISRATGIPLGEIILYNIFYEINPFCTSIVGQDESGKLFHGRNLDFGLMMGWDNANNTWILTERLRDAMIIVDFQRDGKTIYSGAHFVGYIGMLTAVKKNAFTMTINARFGLEDKYMGILQWLDGQSNGQMVAFLSRQTFENATNYDSAMETFSNAELVAPIYFIIGGTKKNEGAVITRSRTKPDDVMTLE-RNNSWYLLQTNYDNWKKPLFVDDRRTPGNKCMKELTQKGMNFKGLFNVLSTKPNYNKMTTYTALMQVDEGTLDVYLRDCPDPCYPW 396
            E CRK  YP    T +  +  + +NLDLP  +RW E++      +K ++  +K++    VP  K++++++E  P L+   P P+ +E++GI+  T IPLGEII +NIFYE+   CTSIV +D+ G L HGRN+DFG+ +GW+  N+TW++TE+L+   + +DFQR+ KT++  + F GY+GMLT  K   F++T+N RF +   Y+GIL+W+ G+ +   + FL+R   EN+T+Y+ A    +  +++AP YFI+GG +  EG VITR R +  DV  L+ +   WY++QTNYD WK P F+DDRRTP   C+   +Q+ ++F+ +++VLSTKP  NK+T YT L+ V +G  + YLRDCPDPC  W
Sbjct:   29 EDCRKSTYPPSGPTYRGAVPWYTINLDLPPYKRWHELMLDKAPVLKVIVNSLKNMINTFVPSGKIMQVVDEKLPGLLGNFPGPFEEEMKGIAAVTDIPLGEIISFNIFYELFTICTSIVAEDKKGHLIHGRNMDFGVFLGWNINNDTWVITEQLKPLTVNLDFQRNNKTVFKASSFAGYVGMLTGFKPGLFSLTLNERFSINGGYLGILEWILGKKDVMWIGFLTRTVLENSTSYEEAKNLLTKTKILAPAYFILGGNQSGEGCVITRDRKESLDVYELDAKQGRWYVVQTNYDRWKHPFFLDDRRTPAKMCLNRTSQENISFETMYDVLSTKPVLNKLTVYTTLIDVTKGQFETYLRDCPDPCIGW 395

The following BLAST results are available for this feature:

BLAST of TCONS_00040028-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00040028-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ASAH1	6.608e-119	43.05	Acid ceramidase OS=Homo sapiens GN=ASAH1 PE=1 SV=5	[more]

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TCONS_00040028-protein (polypeptide) - C. hemisphaerica