|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1083319..1087126+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022075 ID=XLOC_022075|Name=XLOC_022075|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3808bp|location=Sequence derived from alignment at sc0000078_pilon:1083319..1087126+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTATATCGCAGACGACTTTTAGGACAAGGAAGCTTTTACTTGAAGCA
AAATCCAGGAGAAGCTAACTTGACTATTGATGAGTTACAAGAAATGATTA
GAGCTGGTACTTATAGTAGtgttatgaaaaaacttttgagataTGCTAAG
AACATTACAGGAACAAATGCTTATTGGAGTCAAGCTAAAGAGCAGTTAAA
AGCTACAATAAACCAAGTTGGCTCACCAacaattttttggactttgtctt
GTGCAGAGTTTCACTGGCCAGAGTATCATGCCTTATTTTCTACTGATGAG
AAGGCTGATTCGAGCACTTTACATGAGAATATAATTAACAATCCACATTT
GATCGATTGGTTCTTTACAGTCagagttgaaaattttgttaagCATTGGC
TTTATGAGACTCTTGAGGCTGAATGGCATTGGTACAGATTTGAATACGCT
GTTATGCGTGGTTCAATTCATTGCCATGGTGTCGCCAAGCTTAAAAATGA
TCCAGGACTATGTAAACTTACACAAAAAGCCTTAGAAGGTCATCTAGCTG
AGAAAAAATTGTCTGAAACTGAtgatgatattgaaaataatagAGTACAA
TTACAGGTTATTGTTAATGAAGGTAAAGCTGCAGCACAGCAAGTTTGTGA
CTATGTTGATACTTTGGTAACTGCTTGTAATCCATGCACACCTGAGGAAG
GCTGGGTAAAACCAAAAGTTCATCCTTGTAAGAGAAAGCTTGAAGACTta
aatgatgatgattttgataatGATTATGCTGATTTAGTTAATTGTGTTCA
GAGACATACTAAATGTAGCTCAGCTTACTGTTTACGTAAGAAAAATGACG
GTGAACAATATTGCCGGTTTAAATTTCCGTTTGAAGACTGTGATAAAACT
TATATTGACTTTGAAGAAGTAACTTCTAAGAAATACGGTAAGCAATTTAG
ACCCAAGATTGTCTTGAAGAGAAATGATTCAAGAGTTAATAGACATCAGC
GGCTGCAATTGCAATCATGGAGAGCTAATTGTGATATACAGCCAATTATA
GATTATAATGCATGtttagaatatctcgcaaagtATGCTTCGAAAGCTGA
AAAGATTTCTGATGTTGCTAGAGATGCATTTGTCTCGGTAGTTGAAAATC
TGAAGGGAACGGAACAAATGAGATCAGTTATGCAAAAATTGATTATAAAA
GCTGTCGGTGAAAGAGATTTTAGTGTACAAGAGGTAATGCACCATATATT
GTCACTGAAAAGTTCATCATTTCAAGTATTCAATGTCTCTGTTGACGGTT
CAAGAAAGATTGAAATTAGCAATGAAGAAATTGTCACTGAAGCATCTACT
GTAGACAATTATGCTAACAGAGAAAATCTTCAAGGTTGTGATAGAACTAT
TTTGGAAAGtaattttgttcaatttgtaTCAGACTACACAGTGACAAAAG
aagttataaaaaaaagaaAAAAGCCTGTAATTGTTAGAGCATTCCCAAGT
CCGCCAGCAAATCCAAAAGGACCTAATTATGGTGCTTTTTGCAAATATCA
ATTGCTTAAATATAAGCCATGGAGGTCCAGGACAAGTGACGCTTGGGATA
ATTTAGATGGCGAAGATTCTGAAATGTTTTGCCTGAAATGGAATGAGTTT
TTGCAAAGTGAACAAGGTCAAAAACTTGTTCCGAACTGGAGAAGAGAATT
TCATAATGCAGAACTGTATTTTGAAAGATCAGAACATGATGATTATGAGG
AAAATGTCGAAGGTGAACGAGAAGAGTGGATGCATTTGGCTGACTTATGT
GCTAATGATAATGATTCAGTTAATGAGTGTTAATAACATACAATATTGGC
AGAATTTTAGACAAAATTATACTGAAGAACAAATTGGCAATATGGTTTCT
TGGCTTGATAAGAAAAAAGCAGAAGTGTctgaaagttttgatttatgcTT
TGAACTTAATGTTGAATCACTCAATGAGGCTCAAAGAAGGGCATTTGACA
TTGTACTTGATCATGAGAAAAATCCACATGAACAATTATTGATGATGATA
ACTGGATTAGCCGGAAGTGGAAAATCATTTCTAATTAATAATATTAGGGC
ATTATTGAAAGAGAAATGTATAGTTTCAGCCTATTTTGGAATAGCTGCAT
TCAATGTAAAAGGCAAAACTTTGCATTCATTGTTAAAGTTACCAATACGA
GGTAGAAATCTTAAAGATTTGAAGGGTCCTGCTCTTTTACAATTACAGGA
GAAATTAAATGGTGTTAAATATATCATTATTGATGAATACTCTGTTGTCG
GCCAGAACTTACTAGGTTGGATTGATAAGCGGTGTCGTCAAGGCACTGGT
GATTCAGATAAACCATTTGGAGGAATCTCAATAATTTTAGTTGGAGATAT
TGCTCAGCTACCACCTGTTGGGGATAAAgttctatatcataaaaaaccTA
ATGGTGAAATAGGCACTATGGGGTTTTGTATGTATGGAAAATTTACTAAA
GTTGTTAAACTCACTGTTAATGAAAGATCAAAAGGTGATAATATTGAACA
AGAAAAGTTTAGATCTGCTTTATACAGATTAAGAAATGGAGATTCAACTG
AGGAAGATTGGCAGATGTTTTTATCTAGAACACCTGCCAACTTAACAGAA
GAAGTTGACAAGAAAAGTTTTGTGAAATTgtcattttcaaatgaaaaagt
agcTTGTGATAATCACGAGGCTTTGATGAGTTTAAATGTACCTGTAGCAC
AAATAAATGCAAGGCATAGTAATAAAGCTTCAGCTAAGTTATCATCAGAC
GATATGGGTGGATTAGAACCAAAGATATTTTTGTGTAAAGGCTCTAGAGT
GATGCTTACTAGAAACCTATGGACTGAGAAAGGGCTTTGCAATGGATCAA
TGGGTTATGTGAAAGATATAATTTATCAGGAAGGAGATTCAACTCCGAAT
CTACCAATAGCTGTTGTTGTTCAGTTTGATGATTTCTATACAGGACCAAG
TATTTGTGAAGACCAGCCTCGCTGTGTTCCCATTATACCTTTAACTAATG
CTTCAGATTTACATGGTTCTTCTCATGAGAGACAGCAGTTACCTTTGAGA
TTGTCTTGGGCAATTACTATTCATAAATCGCAAGGACTCACCATTAATAA
AGCATGGATTGATTTAGGAAATACTGAGAAATTTATTGGGTTAGCATATG
TAGCAGTATCAAGGGTAAGAGAGCTAAAAGATATGATAATTGAGTCAATG
ACACTAGAACGTTTAAGAGATGTAAAGAATAGAAAGGACTTTGAATATAG
AAAAGCTGAAGAAGAAAAGATCACCGACTTAGCAAGATGTTTAAATGAAG
GTTTATGAAGTTCAATAATAACCATTGAATAAGCCAGAATAAGCCTTGAA
AGGTAACCCTGtcataaaattacaaaatgtaaaTATAGAATAATTTGTAC
TATTATTTTGTTTCTCTTTTTATAATTTAGGAGATTTATCTCAATTCAAA
CACAATTCAACAAAGTAACTAAAGCCAAAAACAAAGGTaagtttaaaatt
attttttaatgtttcaatAGTTCTCGAATCACTTTTATTCTATACTGAAA
TTGTATAGGATAATATAATGTCGTCTTTCTACGAAAATTACAAATAATCA
ATTTCGAGAGATTATACATCTATAGTTTTAGAGTGTTTAAAGCTCAAAAT
AAAATCTCTCTTAGGCATATACTATTAATACGGTAACCCAAttttaaata
tgtttttttttctcattcagGTTATTTTCACAACATTCAAATCGATCTGA
AACAATAA Coding sequence (CDS) from alignment at sc0000078_pilon:1083319..1087126+ >XLOC_022075 ID=XLOC_022075|Name=XLOC_022075|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1642bp|location=Sequence derived from alignment at sc0000078_pilon:1083319..1087126+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTATATCGCAGACGACTTTTAGGACAAGGAAGCTTTTACTTGAAGCA
AAATCCAGGAGAAGCTAACTTGACTATTGATGAGTTACAAGAAATGATTA
GAGCTGGTACTTATAGTAGtgttatgaaaaaacttttgagataTGCTAAG
AACATTACAGGAACAAATGCTTATTGGAGTCAAGCTAAAGAGCAGTTAAA
AGCTACAATAAACCAAGTTGGCTCACCAacaattttttggactttgtctt
GTGCAGAGTTTCACTGGCCAGAGTATCATGCCTTATTTTCTACTGATGAG
AAGGCTGATTCGAGCACTTTACATGAGAATATAATTAACAATCCACATTT
GATCGATTGGTTCTTTACAGTCagagttgaaaattttgttaagCATTGGC
TTTATGAGACTCTTGAGGCTGAATGGCATTGGTACAGATTTGAATACGCT
GTTATGCGTGGTTCAATTCATTGCCATGGTGTCGCCAAGCTTAAAAATGA
TCCAGGACTATGTAAACTTACACAAAAAGCCTTAGAAGGTCATCTAGCTG
AGAAAAAATTGTCTGAAACTGAtgatgatattgaaaataatagAGTACAA
TTACAGGTTATTGTTAATGAAGGTAAAGCTGCAGCACAGCAAGTTTGTGA
CTATGTTGATACTTTGGTAACTGCTTGTAATCCATGCACACCTGAGGAAG
GCTGGGTAAAACCAAAAGTTCATCCTTATGCTATATCGCAGACGACTTTT
AGGACAAGGAAGCTTTTACTTGAAGCAAAATCCAGGAGAAGCTAACTTGA
CTATTGATGAGTTACAAGAAATGATTAGAGCTGGTACTTATAGTAGtgtt
atgaaaaaacttttgagataTGCTAAGAACATTACAGGAACAAATGCTTA
TTGGAGTCAAGCTAAAGAGCAGTTAAAAGCTACAATAAACCAAGTTGGCT
CACCAacaattttttggactttgtcttGTGCAGAGTTTCACTGGCCAGAG
TATCATGCCTTATTTTCTACTGATGAGAAGGCTGATTCGAGCACTTTACA
TGAGAATATAATTAACAATCCACATTTGATCGATTGGTTCTTTACAGTCa
gagttgaaaattttgttaagCATTGGCTTTATGAGACTCTTGAGGCTGAA
TGGCATTGGTACAGATTTGAATACGCTGTTATGCGTGGTTCAATTCATTG
CCATGGTGTCGCCAAGCTTAAAAATGATCCAGGACTATGTAAACTTACAC
AAAAAGCCTTAGAAGGTCATCTAGCTGAGAAAAAATTGTCTGAAACTGAt
gatgatattgaaaataatagAGTACAATTACAGGTTATTGTTAATGAAGG
TAAAGCTGCAGCACAGCAAGTTTGTGACTATGTTGATACTTTGGTAACTG
CTTGTAATCCATGCACACCTGAGGAAGGCTGGGTAAAACCAAAAGTTCAT
CCTTGAGATTTATCTCAATTCAAACACAATTCAACAAAGTAACTAAAGCC
AAAAACAAAGGAGATTTATCTCAATTCAAACACAATTCAACAAAGTAACT
AAAGCCAAAAACAAAGGTTATTTTCACAACATTCAAATCGATCTGAAACA
ATAAGTTATTTTCACAACATTCAAATCGATCTGAAACAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1083319..1087126 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 787-822:3773 |
| Aaloc | 730-783:3482 |
| Aaloc | 703-726:702 |
| Aaloc | 1-699:1 |
|
