XLOC_023186 (gene) - C. hemisphaerica

Overview
NameXLOC_023186
Unique NameXLOC_023186
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001894:13478..23300+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023186 ID=XLOC_023186|Name=XLOC_023186|organism=Clytia hemisphaerica|type=gene|length=9823bp|location=Sequence derived from alignment at sc0001894:13478..23300+ (Clytia hemisphaerica)
ATTTAAATTTTGCTGCAATGAATTTCGATGTGCTTGAAAATGTCTACCAG ACATTTCGCACCTCAAACAGCGCCGGAGACCTTCTAACCACATTTCTGAA CGGTGAATTCGAACGCCATTTTGAGAATTCGGATGAGGTTGTAAAAAATT TCGTTAACGACACATTACCGTGTATGATCAATATCACTCGTATTCATATC AATAAAACAATGCGGTCCGTGACACAAAGTTTATGGACGAATTGGTAAGT TTCAGTACtcgtttttatgagaacaaactatataagaacatgaccaaaat gttaagaacaagttacgaACATTTTATAGCTTTGTAGAGACTATTTTCTT ATAGTCCGGCGGCGAAAAGGGCTTTTTTGCATCAACCCttacaagtagta aatatgggtttttattttattttctcgttATATGGTTCCTTGGGAcctca aaaccggtttttgccaagctggcaaagctggggaaaatttttttatgggg gcttgaagggggtagggtcattttagtctgggggtccttagaaagtcgat ttttgaagttctcgtTTAGCaaaaactgattgtgccatcagatagagctt caagagtagatctccaaaatggggtcatttgtctcatttggcggacttag tcccccggaattggctgatacgtactatcgattagaggggtcatttatag ggtttcctgggctagatcatgagatattagagtttgaaattttgctgact cagcaaaaaagggccaaaaacgTGGAAAaacgctgagtcagcaaaatttc aaactcaaatatctcatgatctagcctaggaaaccccataaatgacccct ctaatcgatagtactcttcgagacgcatctgttaaaacTAGTATCTTTCG CTgaaatctttctcaaaaatgctgaaggAAAGaaactcggttagaaataa aatgctgagacactttttaagtttgatcttttgggaatctcaaaaaaaaa aaatgaagtcgatatctaaatgctatgggtgactttaacttcgttaaaag tagtatggtgtggtaaaattgcgtttttttctacatcaatttgaaatttt taacgagatgattgctgttcatttgagtaatcagtgaaatgtgtcaaaaa tattactattcaatggaggtgagaataaacatcagctgaattctctcttt tgtctttgttgtttccgaaggagacaattatttgagtaaataatccatca taagacgaactttgtaaCAGACATAAGTGTAagaaccactgacctttata tatttGGTTTATTGTTCAACGATGAGAGAGatgattggaaaaaaggttAT CATTAcaggggggcgtacgggatatcggtacatcggtattggcctttttt tagatcggtaaatcggtattagaGGAAAAAATTGATCGGTAATCGGTATT TTAAGACCATCTCGGTATCGGTAAAAGACCCTTTttatgtcggtatttcg gtatttttggTCAACTATCGGTATCGACCACCTCCTTGGTATCGAAGATC ATGAGTCTCAGCCAGGGGTCTGCTTGACACATTTTCCTGTcgtgaataca gttgacgctctctaaacgATCCATTTTGGCGGTTTTGGCAGGGGGCCACG CCTCCCCAAGTGGAGTTTTGAACGCCCAACTCTTAAAATTACCCTTAATG GGCTTTAACTTGCGCCCAAAGACcagaaataacttgaaaaatcatgaatt tttttgctcCCTTCGCTCGCAATTAAGTTATAAGACGATTTTTGAAGGGA GATCTAACTGTGCCCCACGACCAATTTGGTGaaaacaatattcaaaacaa aaactcacaATTTCTTTCTTGCTTCATTCGCACGCACTACtttccttcaa ttttttgatctagagatggtattaaatttatatctttatccgttactttc tactattcgacattctatcACTCGATAAGCTCCCATTTTCGATGAAAGTT CGAGGTTCCTTGATGGTTTTCCGTTCTCTTATTCAATTTTTAGCATTACG CTAaacttttggtcaaatttaagcTCTGTTTTGGAAACAATTTTGGCTCG CGTCAAACACAGTTAACTTTTTCCACTGACTAATAGAGAAGCATGACCAT GGTTgtgttttttgttctttttttgtcaaaaattttgttcaatGTCATTA TACTGTAATTGGCTTTACTCAATCCATCTCGATGAGCAATGTCGCAATTT TTACTTggtcgcttcgctcgcatttcctaaatatttctaaaatgacCTGA ATTTTAACCTTTGGTATACGAATGCAACCAAAAAATGGCAGAATAAGCAT ACAAGGCGCCTTAagccaaaattctacttttgcctGCCCAACCTTGAtct acccaccacgctactgtttgGTAATCGTCATAGAGACTTTGGATGGTGAC AAACCAAACCTTTATCGCccacacatacccagcacccatatttgcctaag taccccctccgggagataagtacctgaaaaattgggaaaaattgatcggt gtcggtatttgaacgaaaaatttatcggtatatcggtaattgagagaaaa agtgatcggtatatcggtattacgaaggcccgtacgccccccacattACA TCCACGTCAAAGACGTCTTCCGAAAACATATTGTGGCACGTGAAAAAGAA AGATTAGAAAATGTGTAAGTTGTTCATTCTCTAAAATTGCTCGTCTAGTT GACGGGGGCACCTTTTGCagacattgggcttttccagaaaaaaactgtag gtccatccctctgtggTTGGAAATGCtgcaaccccctggaattccaggta ATTttaggtttaaacccctctggaattctgaattttagtaggatttaaaa agctaccccacggaattccagttattttagGCAGATTTTTTgcatctccc tatggaattccgccacatatcaaaccttacccctttggaacggaaatgga cctcctcaacagagggtatacggtttttttctagaaaagcccaTTTCTTA TTGCTCATTATAACAACtttaaaaagcagaaaaaatcaaatcataaaaac tgtttttattcCTAATTAAATAACGTTTTagggtgttttgagggtgtaaa aattttctttgtcaccCAAACGGTAGgagccattttttccaaaatatccG ACCCCCCACTCCAAATGGCTCGCTGAGGCCCATGTTCGATCTAGAAGGGA TAAAAAGTTTTAGAGAAGGATTTGATGATGAAAAGAAGTCGAAAATATGA TTCAAAACCTTATTAAACATCCCAGCTGGTAAACATCAGATATGTTATTT TCTCTTTAACCTTATTGTTTTAGGTTATCAGACGGACCACCCATtcaaac caaaattttaaaCTTCATCAAAAGTAGAGCTTACGAGGTTAAGCCAGGTT TGTTGAACAAGAATTTCTTACTGCCTTTTTTTCCTGTCAAACCCGGTGTA CAAACTGGTGTACTTCGAGATAACCtaatattttatcaaacatAACTAAT GTAGAACAGACCATGATTGAATTATATTgggggaatcgaacctcagccGC CTGAGCAGAAACCAGACACCAAAAGTCAATGTCAATGACCACAAGTCCCC TCACATCTTCCTCAcatcacatggtatgggttgatgACCTGGGCGATGCA AAGCTTCAGTCGTCACTTGCGTGCCAAGTGAGCCGATGCAATTgggggaa tcgaacctcagccGCCTGAGCAGAAACCAAACAACTAACCAAAGGTCAat gtcaatgaccactataccacagtgCCTGTGGGTGGCTGTAGTGACTGTGT ATAAATAataccgtgaagttgggtaacttttgcatcagtggaggctaaca tgcatagccctcaaagaAATGACCTGGCAGCCTCTGGCACTTGGCTGGTC ATTATtaaaaatacaactacgcagctccgctcgcagctctactacTCTAc cgtttttgttttgatttgactttgtatttcaatgaccagccaggtctttc atttgagggctaagCATGTTAGTCTCCACTGATGCAAAAGTTACCCGATC CCCCGATCTCCACATATATCATATAGAGTACTGTATATTATGTTGTATGA AAACAAAACCAAATTTCAATGATAAAATCTTACTTTAAAAAGATCAAATA TTACATGTGTAAATTTCTCTTAAAAGTAAAAGTCATACAAAAGTGCAATG ATGGTTAAAATCCATCCAAAAATCCATTCAACGATCAATCCAAATTAATC ATGATTAAAGAATTCACTACTTTCGGTAccatttttgattaattttgtaG CCTGTATTTCTTTACTCTCTTTTCGAAAGTAAAAGTATAGTTCGAGGCTA ATGGAAAGATCCTGTAAGGTGTTGTAAGTAAACCTACCAGCAATAGAGTG AGTGATTAGGTACAGGCTAAAACATTCCCGAGCAGGAGATCATATCAAAT CAACGTATTATGTTAATTCGACAAAGAACGGATTTAACATTATAtgttaa aacgcttaaagaaTTGCAATTTACATATTATGTTAAAACTGCCGTCGATT ATAAGTTGTTTTATCACAGCCtttcattttgaaagatttctgaATCTTTT GTACCCTAGACGGTCGCAATGGATAAAATCGATCATCGATGTCTAATTCa tcgattaatatcgattagctatcgattttaatcgattaTCGATTTTATCG ATTACGACCGTCTTGCTTATAAACACCATTACTAAGGATGGACAAAAGCA TTATCGAatagaaatgattatttttactttttcaggcTACTTGATCAAGC ATGCTgtgttttggttgattttttcatttttgagtgTATTCTTCTTTGTT CCGTTATTTTATGGTGGCCCTTCGTTCCTAATAACACTTATAAAAGGATA CTGGTGAGTTCGAACATTTTTACCCAGCTTTCACATAACGNCTTCGTTCC TAATAACACTTATCAAAGGATACTGGTGAGTTCGAGCATTTTTACCCAGC TTTCACATAACGTTCTTTtcacgtttatctaatgttcacaacgtccatat aacgtttgatgaacgttgaaacaacgttatgtgtcTGCTGGGTTCTACTC AGGTAGTTATgtctcaaaaatatgaaaattaccataattttggAGAGAAT CAGCCGGCGAAAAATGAGCAAACTAATGATTTAATAAGAAGGGCACCATG ACGAAGTTACCTTTAGCAAAACtagatttatttgaaaaaacaagttttgc tgacgtcatcaatttttgctTTTGCGGTACCCATGGTACCCTTCGTATTA AGTCATTGGTTTGCTCATTTTCTACCGGCTAATGCTTTTCAAAATTATGG TAATGgttaatttcttttaaatatgtttttgagacaGACCTAAGCTACTC AtattcgggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggtattta GGAAAAACAGGTGACTTGTGTGCACGAGTCATAAGGGTACCCTTTAATAC CTTAGAAGTCCCTCAAAGGGGAGCAAACTCATAATTTATGCTCTCAAAGG GTCGCTTTCGAGAATTGTGACCAACCGGAACTCAGCTAAGAAAGTGAGAa ctttttttaccgtttttggAACCCTACAAAGGATTTTCCAAGAGGCTTTA GTCGATTCCAAACAAATTTTCCTTTAGCATACCTGGTACCCAATTTTTCT TTGGAAGGACGGGAGAAGTCCTTTAAAACAATATTTACTCCTGAGATGCC CCTCATAATATAGACTTTtctagaaaaattgaattttttctctttttttt ccaggCCATCAGTGATTGTGGCAGTAATAGCAGTGGTTGTTCAAAATGGT TTGGCACGTGGATGTTTCTTACTCAGTAAAGAAAATGTCAGTGTTGATAA TAGGTGATTTTTAGTTTATAAAGATTCTAAAAAAGCTAGAGATACATATA CTTGGTAAGTACTGAGTATTAGGGCTCACACGGCTTCTCAAATCTCctta aatgaaattttgtggaGAGGTTTGTTTTCATAGATAAAAAAGCTAAGAAA TCTcctcaatttttacaaaaatataggaaaatctcctcaaaaattggaaa atttctcCTTAAATCTCCTCAATTCTCCTCAAATCTCGAATTTTGAAAGC CTGTGAGAACATTCAGAGATATAAATTGTGAGCCTGTAAGACTCAAGTAT CGGTCTCAATAAACGTGTGCAAATAACCGTACTTTTCAAACAAACGCTAT TGGTTGAAAGGAAAATCAAGCAAATCCATTGGTCTATCGTATAATCTGAC GTAATGGTTGCCAAACACAGATGACACACATGACATGCATCCTAAATATa gttatttgttcgaattacagagagattcgaataattGAAAGCAATTTTAA CAGGGTTTTTCTTTGACGAAgactggaaacaagttcgaattatagaagtt tgGATAAACATAATCCTTATAAAACAACATTGGTCTGgaaagcttattgt tttaactttttgttagctttttctttgttataatcaaaagatgaaaaatc gatttgctcagttctTTGATCAAGTTGCCAAGTACTCCTCTTGAGATTGG TGTaaaagatttaatcacatgatcaaaaagtgagcaaaacaaactaattt ctcaacacaagttcaagtaagaaagaATGGAAAGAAACTAAAGTCTACCA GActggggttttttatacggactatggtatAAACGAAAGTTTACCGTAAG GTCCGAAATACTAATTTATCGTCTTTTTATTTTAGGCGTGGTTTCCACAT TACGTCATACGTGCTCTTTTATTTCAACGTCTTTATTGGTATTGTGTCAT GTTTACTACGCCTTGCTTATGGTGCCATCTTGGGTGTAGTCATGTTGTCA AGGCTACAGAAAAGCACTCTACCAAGATCTTATGAACGAAGAGATCCAGG TATATTGATAAGAAAGGCTCCGGAAGGCCCCAATAGGATGGGATTGACGA AGGCACCCTCCTACCTTGCTCTTTGACTGGTCCCGTCACAACATTTAGCT TAGTGAAATAgatttaagaaattttaaacaagattaaaggttttgtcttt aaccctattaaccccaaccttttttgatttttgtagccGCAGGGAGGGGg tggggtagaatctaccaccctctaTTATTTCTTATCTAGAAGAGCTATTT TAGcttggttttatgtcatgttccACAATAAAGTCAGAAAACCTAACCTA GaaaacctatgaccctaaaaaaTTGCAcaaattttcaagatgtttcaaaa ttttttctccgagatatacacaaaagaacatcagcgtggtagattctacc cccttGGGCTAATAGGTTTAAATAAGAGTgcaatcttttttatattgaac tGATatagatgtggagcaagattatagtgagaaagaggaaaagaaagaca ttttttgcttatatcagcacaatacaACAATGGGGagaccatagtataag aaagccgcggctttcttatactatggggagacattgtcctgatatgaaac atgtgtctgatatgaaacggcaACACGTAAAAAAAAACCCTTTAATTTAC TACTACAATGATACAAGATAAGTCCAATCTTGATTTCATCCTTTTTTGGG TTATTTTGATgatataaaagtttttttccaagatttttacttttctgaTC AATTTTATTTGTATAACTTTTATACAGGTTTCTTAGCATATCTTGGTTTC CTCATGGTTGAGCATCAACACTCGAACCCTGTCCTTCATTGTTTCGTGCG CATTTTACTTGGACACATCGATAAATCTCTTCAACAAGATGAGTTCACAG TTGTCAGAGGAGGTAAGTAACATATAAATCCCTGTCTTAcaaccccggtg gaactttttacCTCAAAGGGGATAGATATTTCTATTGAAATACCAATAGA GATAGAatctctattgttccaaggttaaaaaacccaaatgcaatttctaa acattgaattttgaaaggatgaaatcaaaatcaatttcacagtgaggctg aaattctatGGTATTTTTCCGCCagtgacaaaatttttgccaaattttcc agtggggctaggGTTCGAGcgggtttgtgacacaggggtgtacacATGTT TCACCCAGCATTTTTCACCCGAAAAAAGGTCACCTTTATAAACTTACAAA CAAACACACTTTACTTTTAAAACTCGCCATTGGATTTGACAACGTAGgct tttaaatttcattttgttcATGATGGAAGACATCCAATAGTTCATCATTT ATATTATCCGTATGGTATGTTTCTgtaacaatgtttttttttctccaaaa acgagttttaaaaattctttgatTCTTGGTTTCCGAAAATTTGGTTTCAG TCAATATGTGTAAAGTAAAGCTAGATATTTTACTCCAAAAAATTCtacat ttttagaaaccaaagtCTTACTGAAAACCTACGGTTCAGCTGACAACGCA GAATGGGGTGCTAACGGGTGCCCATTATCAATTAATAAATCACGCCAAAG AACCGCTCAAGACGTATCACGTAGCGCACAGATCCGATGGCATCTTGCCG TAATTCTAATACAAAATCCGTCGATACGTAGATACCGCGGACATTATATA CGTCGTCATATTCCCGTAAAACATCTTACGCGTGCTTTATTTATGCAGTT TAACGCAGGGAAAGAGCTTGAAGGAGAATCAAATGTTGATATTGATAATG TGAGAGCGGCTGCTATTGGTTATCAATATCGCACAGACCTTTATAACAGC GAATCACCAGAACTGACCACAAGTGAAAAGTTTAAACAATGGTTGCAATT CGAAAAGTTTTGTAAACATCATTGTAACGAGACAAGTGACGACGTGGAGC CTGAGGAGAGTCTTCCGGATACTTTAAAATATAAAGCGAATgagaatttt aagaaatttttacaATTCATGAAATTTAGGGAAAGATCAACTTCAAATGT ATCAAGTAACTCTTCAACAACGAGAGAACAAAAAGTTGAATCTTTAGATG ttcaaaaaatgatcaaaagtgTAACTGAAGTCAGTATTATTGAtgataat gatgaaaataaagaaacgaatgctgaatcagcagataATCCAAATGTTGT CCATGTATCACCGAAGAGAGAGAAAGGGGAGCAAAGAAACACATGTGAGC TAAATATCGAAATGGAAGAAGTTCATATAAATGAAGGTGTAGACAAAACc gataaaaagacacaaaataaACTCGATGCTTGGGTATGAGGtgctacata tatttttccaatattttttccaaaattaccAGATTTTATGAACCTTTGAG TGATTCGACTTCAATATTTCTTAATTGTAGGGCCCTTTCTAATTTATCGT TTTTGTACCccttgagagactttcgagggtttaaaaaagggacccttacg gctcgcacatacccgacatCCATTTTGCCCAAGTACTCCGTCTCGCATAT ATACCATAAATTCTGCTTTGTTATTCTATATTCATTGCCTGGTTTATCCA GACCACTAACATATCTTAAATCCAGGGTTGTTTATCTTCATGatggattt taatttttgaacaTGCATATTTAGAgataaaacaaataattttgatagtt cttgatatttttcttatccacatttttacaaataaataacTCTTATTACT AACGAAATTATTCCAATCCTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038619TCONS_00038619Clytia hemisphaericatranscript
TCONS_00038620TCONS_00038620Clytia hemisphaericatranscript
TCONS_00038621TCONS_00038621Clytia hemisphaericatranscript
TCONS_00038622TCONS_00038622Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038621-proteinTCONS_00038621-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001894supercontigsc0001894:13478..23300 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.32 0.41 0.47 0.38 4.77 4.13 13.02 13.32 6.24 9.19 6.9 4.85 5.22 4.42 3.31 4.89 2.16 2.17 4.58 4.97 3.04 3.3 4.92 4.57 5.91 5.84 10.53 7.34 2.62 1.22