TCONS_00038621-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00038621-protein
Unique NameTCONS_00038621-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length529

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00038621-protein ID=TCONS_00038621-protein|Name=TCONS_00038621-protein|organism=Clytia hemisphaerica|type=polypeptide|length=529bp
TNFVTDISVRTTDLYIFGLLFNDERDDWKKGYHYIHVKDVFRKHIVAREK
ERLENVLSDGPPIQTKILNFIKSRAYEVKPGYLIKHAVFWLIFSFLSVFF
FVPLFYGGPSFLITLIKGYWPSVIVAVIAVVVQNGLARGCFLLSKENVSV
DNRRGFHITSYVLFYFNVFIGIVSCLLRLAYGAILGVVMLSRLQKSTLPR
SYERRDPGFLAYLGFLMVEHQHSNPVLHCFVRILLGHIDKSLQQDEFTVV
RGETKVLLKTYGSADNAEWGANGCPLSINKSRQRTAQDVSRSAQIRWHLA
VILIQNPSIRRYRGHYIRRHIPVKHLTRALFMQFNAGKELEGESNVDIDN
VRAAAIGYQYRTDLYNSESPELTTSEKFKQWLQFEKFCKHHCNETSDDVE
PEESLPDTLKYKANENFKKFLQFMKFRERSTSNVSSNSSTTREQKVESLD
VQKMIKSVTEVSIIDDNDENKETNAESADNPNVVHVSPKREKGEQRNTCE
LNIEMEEVHINEGVDKTDKKTQNKLDAWV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023186XLOC_023186Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00038621TCONS_00038621Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14752RBP_receptorcoord: 72..313
e-value: 9.6E-50
score: 169.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 464..498

Blast
[Close]
BLAST of TCONS_00038621-protein vs. Swiss-Prot (Human)
Match: CC180 (Coiled-coil domain-containing protein 180 OS=Homo sapiens GN=CCDC180 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.414e-16
Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 0 
Query:  154 RGFHITSYVLFYFNVFIGIVSCLLRLAYGAILGVVMLSRLQKSTLPRSYERRDPGFLAYLGFLMVEHQHSNPVLHCFVRILL-GHIDKSLQQ 244
            + FH  +Y LF++NV +G+ +CL RL    +LG+ +++R+ ++ +   YE  D GF A++G L ++H H NPVL  F  IL+  H +K LQQ
Sbjct:   30 KAFHNFNYFLFFYNVLLGLGACLSRLLISCLLGMWLIARIDRTIMQSGYEGADMGFSAWIGMLYMDHYHINPVLVSFCHILITNHREKKLQQ 121
The following BLAST results are available for this feature:
BLAST of TCONS_00038621-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC1803.414e-1640.22Coiled-coil domain-containing protein 180 OS=Homo ... [more]
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