XLOC_021489 (gene) - C. hemisphaerica

Overview
NameXLOC_021489
Unique NameXLOC_021489
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001463:48220..51921-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021489 ID=XLOC_021489|Name=XLOC_021489|organism=Clytia hemisphaerica|type=gene|length=3702bp|location=Sequence derived from alignment at sc0001463:48220..51921- (Clytia hemisphaerica)
CTTCATCTCGTATAACGTTTTAGCAGACAGCTTTGCATACATCTCGAAAG
AGGTTAGTATTTTTCATTCAATATCACTTTGTTCACTTGTAACTTAAAAT
GCTTTTTTTTTTTTTTGATACATTGTTAAATATTCTAATCCAACTCGATG
TTTCTGATATATACTTGACGTCGAGCTTAATATCCTAAGATACTAGTTAC
AGTCTGAAGCATCAAAGGTCCACCACATCCCAATAATTGGAATCTAAGAG
GTTCAGCACTTGCCAGAGGAAAAAGAAACACATTTAATTCTTTAAAAGTA
ACACCAATGTTTTCATTTTTGTTATAGAGAAAGAGATGGGCTTGCTAGAA
GCATTCGGGTTTGAGCTCTTATTCATGTTAATTGAAGGGCTCTTTGTTTT
AACACTTGGAGTTTGCTGCTACATTTTGTCGTATTTCATCTCATGGTTTT
ACATTGTTGGATTTTTCTCCCTTCTTTATTGGTTTTTGGTTACCGAGAGA
ACTCCTTCACCACAAGAAATCCGAAAGCGTAAAGATACTTTTGTTGTCAT
CGTTGGTGCTGGCTATTCCGGATTATGTGCGGCTATTCGGTTGAAAAAAG
AACGTATCCGCTTTGTTTTGATCGAGAAATCGGAAACACTTGGCGGAACA
TGGTGGGATAACAAATATCCAGGGTGTGCTTGTGACATCCCCTCGCATTT
TTATAGTTTATCCTTTAAACTGAACGCGTTTTGGACAAAGATGTATTCTT
CAGGAGATGAAATTCAGGACTATTTAGAAGATACAGCTGATTATTACGGC
ATCCGAGAACACGTCAAATTCAGTTGCAAAGTTGACACATGTGAATTCAA
CAAAGAGACACAAAAATGGTCAGTCAAAACTTCAACAGGTCACGAATTCG
AATGCAATTATCTCATCTCTGGAATGGGAGCTTTACATGTCCCTAAATTT
CCCAGTTTGAAAGGAATGGAAGAATTTCAAGGAGAGCATTTTCACACTGC
TCAATGGAAAGACGATTTTGATTGGTCCGGAAAACGCGTAGGAATTATCG
GTACTGGGAGCTCTTCAATTCAAGCCGTACCGAAACTCGCCGAACGTTGT
GAAGAGCTTTACGTCTTCCAAAGAACACCAGCTTGGATTTTCCCTCTCTT
GAATTTGCGTTATCCAGCTATCATTCAAAAACTTTTTCAAGCTTTCCCAT
TTGTTATGAAGCTTCATCGGTTATATTTTTTCTTCAGATCCGAATTTGTA
TTCGCCGCTTTCTTCGGGAAAGTATCGTTAGCCCGAGAGATTATCTCTAA
TCTGACCAACCAACTCATGTCGAATGAAGTTGCCGATCCCAAATTGGCTG
AGAAACTTATTCCTAAGTACTCAATGTTTAGTAAAAGAATCACCATCTCG
AACGATTATTTGAAAACTTTTAATCGACCAAACGTTCATCTCATCACTGA
ACCGATTCAAGAAATTACCCATGATTCTATTCTCCTTAAAAATAACCAAG
ATGCATCAGCGAAAGAAGTTGAATTAGATGCGATCATTTATGCAACAGGA
TTCGACGTTTTGCAAAGTTCGACAAATATGGATATCAAAAACCCAAATAA
CGGAAAGTCTTTATCAACAATTTGGGGAGAAACACCGAATGCTTACATGG
GGATCATGCCAGCCGGGCTACCGAACTTTTTCATGCTCTTCGGACCCGGA
ACTGTGCTAGGTAAGATTTGTATTGATGGTTGTTGATCAGCTTCAGGGTT
AGACTCTCACAAATTACACAAGCAAATAAATTTCATGAATAAGCATGAGC
TTGTATTATATGGATGAAAAAATGGATAAAGACTCGGGTTTGATTTTTAT
GTGTGATGAGTGTGTGTTTTTCATGTGCATGGAAGATGAAGCTTTAATGA
ATCCATGCGATATTCATTTGCCACTACCGGCAGAAATCACATCATCATGA
ATAGTATGAATCCCTTAATTTCTTCATGATTTCTTTTCAAATCTATTTCA
CTTTCATTTTTTATTTAGGGCACAGCAGTGCGATCTTTATGACGGNGAAA
GAAGTGGAATTGGATGCGATCATTTATGCAACAGGATTTGACGTTTTGGA
AAGTACGAAAAATATGGATATCAAAAACCCAAAAAACGGAAAATCTTTAT
CAACAATTTGGGGAGAGACACCGAATGCTTACTTGGGGATCATGGCAGCC
GAAATACCGAACTTTTTCATCATACTTGGACCAGCAACAGGACTCGGTAA
GAACTGCTCCAGTTACATCAAAATACTATTCGATCTTTTCCATCTTCCTC
TTTTTCAATTCTTGATTACTTTCGAAAAGCAAACATTCAGTCCCCTGTCC
ATTTCAATTCTAACCTCTGTTTGAGCCATAGGCGAGCCAGTGCAGTCCTG
ATAAGTCCCAATAAGGACAAAGTCTATACACACTTTAAACCTAAATCTCC
TGAGCGAATATAGTTGGATAGAAATGATAATTTCTTCACGTATAATCCTT
TAATTCTAAAGCTAAATTGCACTGCCTTGGTTCGATTATCGGTCGAAGAG
AGAGAGTGGTTTTTACATTTGTTTTTTTGCTTTTAATTACAGGCCACAAT
AGCGTAGTGTTTATGATCGAGCGACAAGTAGATTTTATCATCAATATGAT
TACACAAAATATTGAACAAGGTCATGCAGTTGTTGAGGTATGTTCACATA
TTATATTTGTTGACGCAAGAGGTTCTTTTAACGTTCATTTAATGTTTTAT
TGATGTCATGGACATTATATGGATGCTTGTTTAACCACGGCGGCAAAAAA
TGGCCTTTTTTCTCCCACTCGCTCAGCAACCTAATACAACTTGCGGCATT
TTCGACCACTTTGTTGATCATTATACACTTTTTGTTCCACCATCAACCTT
TATATGAATTTCCAAAATAAATTCCAAAAAAATTTAGAATATAGAAAAAA
GAATTGTCACGTGATAGCTGATGACGTCATCGAATTTAGAACGAAAAAAT
AAAAATTCAGTTAGCTCTTTGGTAGTACGACCATTCGATAGCTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACGACCATTC
GATAGCTCTCAATGAGTAGTGCTCGAAAATGGGGTCACTTGTTATCGAGA
CCCTTCTGAAACTCGAAAAATTTAGATTTTCGTTTTGCCAATATATGGTA
AAAATCAACGATTGACCAGGTNAATTTTTTGAAATTTGAATTTTTTTTGC
AAAATCATATCCTTTAAGAATATCTATAGGTTTGACAACCTAACAGTCAC
TAATAAGCTAATTTATGGCCAGTGGGAGAAAATAACTCATTTTTTGCCGC
CGTGAACGATAGATTGGGGTCACGCAGTATCAAGATTCAAATTAGATAAG
ACACTCAACGTGTACAAATTTCAAATATTCTTGCTTGACCTTAATCTCGC
CTTGAATTATCATAATATTTGCAATAGGTTCGAGCATTGATTCGCTGATA
TTGCAATATTTTTTGAGACATACAGGTAATCATACGTAAAAATTGCTCGA
AGCTAGTTCTAAAGTCTTTCTTTTTTTCTTAACTTTCCAACTTAGGTGAA
AGAGGAAGCGAACACAGCGTATCAAGAAAGTATCCGGAAACAAACCAAAG
AT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036461TCONS_00036461Clytia hemisphaericatranscript
TCONS_00036460TCONS_00036460Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036460-proteinTCONS_00036460-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001463supercontigsc0001463:48220..51921 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.57	3.49	1.7	1.71	0.5	0.86	2.03	2.74	1.86	1.47	2.28	1.31	6.46	6.96	7.85	8.3	3.57	5.09	6.95	4.74	3.24	3.62	4.21	4.16	5.39	4.41	4.47	4.27	5.54	5.25