TCONS_00036460 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036460
Unique NameTCONS_00036460
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1803

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036460 ID=TCONS_00036460|Name=TCONS_00036460|organism=Clytia hemisphaerica|type=transcript|length=1803bp
TAACGTTTTAGCAGACAGCTTTGCATACATCTCGAAAGAGAGAAAGAGAT
GGGCTTGCTAGAAGCATTCGGGTTTGAGCTCTTATTCATGTTAATTGAAG
GGCTCTTTGTTTTAACACTTGGAGTTTGCTGCTACATTTTGTCGTATTTC
ATCTCATGGTTTTACATTGTTggatttttctcccttctttaTTGGTTTTT
GGTTACCGAGAGAACTCCTTCACCACAAGAAATCCGAAAGCGTAAAGATA
CTTTTGTTGTCATCGTTGGTGCTGGCTATTCCGGATTATGTGCGGCTATT
CGGTTGAAAAAAGAACGTATCCGCTTTGTTTTGATCGAGAAATCGGAAAC
ACTTGGCGGAACATGGTGGGATAACAAATATCCAGGGTGTGCTTGTGACA
TCCCCTCGCATTTTTATAGTTTATCCTTTAAACTGAACGCGTTTTGGACA
AAGATGTATTCTTCAGGAGATGAAATTCAGGACTATTTAGAAGATACAGC
TGATTATTACGGCATCCGAGAACACGTCAAATTCAGTTGCAAAGTTGACA
CATGTGAATTCAACAAAGAGACACAAAAATGGTCAGTCAAAACTTCAACA
GGTCACGAATTCGAATGCAATTATCTCATCTCTGGAATGGGAGCTTTACA
TGTCCCTAAATTTCCCAGTTTGAAAGGAATGGAAGAATTTCAAGGAGAGC
ATTTTCACACTGCTCAATGGAAAGACGATTTTGATTGGTCCGGAAAACGC
GTAGGAATTATCGGTACTGGGAGCTCTTCAATTCAAGCCGTACCGAAACT
CGCCGAACGTTGTGAAGAGCTTTACGTCTTCCAAAGAACACCAGCTTGGA
TTTTCCCTCTCTTGAATTTGCGTTATCCAGCTatcattcaaaaacttttt
caagcTTTCCCATTTGTTATGAAGCTTCATCggttatattttttcttcag
atcCGAATTTGTATTCGCCGCTTTCTTCGGGAAAGTATCGTTAGCCCGAG
AGATTATCTCTAATCTGACCAACCAACTCATGTCGAATGAAGTTGCCGAT
CCCAAATTGGCTGAGAAACTTATTCCTAAGTACTCAATGTTTAGTAAAAG
AATCACCATCTCGAACGattatttgaaaacttttaatcgACCAAACGTTC
ATCTCATCACTGAACCGATTCAAGAAATTACCCATGATTCTATTCTCCTT
AAAAATAACCAAGATGCATCAGCGAAAGAAGTTGAATTAGATGCGATCAT
TTATGCAACAGGATTCGACGTTTTGCAAAGTTCGACAAATATGGATATCA
AAAACCCAAATAACGGAAAGTCTTTATCAACAATTTGGGGAGAAACACCG
AATGCTTACATGGGGATCATGCCAGCCGGGCTACCGAACTTTTTCATGCT
CTTCGGACCCGGAACTGTGCTAGggCACAGCAGTGCGATCTTTATGACGG
NGAAAGAAGTGGAATTGGATGCGATCATTTATGCAACAGGATTTGACGTT
TTGGAAAGTACGAAAAATATGGATatcaaaaacccaaaaaacgGAAAATC
TTTATCAACAATTTGGGGAGAGACACCGAATGCTTACTTGGGGATCATGG
CAGCCGAAATACCGAACTTTTTCATCATACTTGGACCAGCAACAGGACTC
GGCCACAATAGCGTAGTGTTTATGATCGAGCGACAAGTAGATTTTATCAT
CAATATGATTACACAAAATATTGAACAAGGTCATGCAGTTGTTGAGGTGA
AAGAGGAAGCGAACACAGCGTATCAAGAAAGTATCCGGAAACAAACCAAA
GAT
Run BLAST on NCBI

protein sequence of TCONS_00036460-protein

>TCONS_00036460-protein ID=TCONS_00036460-protein|Name=TCONS_00036460-protein|organism=Clytia hemisphaerica|type=polypeptide|length=585bp
MGLLEAFGFELLFMLIEGLFVLTLGVCCYILSYFISWFYIVGFFSLLYWF
LVTERTPSPQEIRKRKDTFVVIVGAGYSGLCAAIRLKKERIRFVLIEKSE
TLGGTWWDNKYPGCACDIPSHFYSLSFKLNAFWTKMYSSGDEIQDYLEDT
ADYYGIREHVKFSCKVDTCEFNKETQKWSVKTSTGHEFECNYLISGMGAL
HVPKFPSLKGMEEFQGEHFHTAQWKDDFDWSGKRVGIIGTGSSSIQAVPK
LAERCEELYVFQRTPAWIFPLLNLRYPAIIQKLFQAFPFVMKLHRLYFFF
RSEFVFAAFFGKVSLAREIISNLTNQLMSNEVADPKLAEKLIPKYSMFSK
RITISNDYLKTFNRPNVHLITEPIQEITHDSILLKNNQDASAKEVELDAI
IYATGFDVLQSSTNMDIKNPNNGKSLSTIWGETPNAYMGIMPAGLPNFFM
LFGPGTVLGHSSAIFMTXKEVELDAIIYATGFDVLESTKNMDIKNPKNGK
SLSTIWGETPNAYLGIMAAEIPNFFIILGPATGLGHNSVVFMIERQVDFI
INMITQNIEQGHAVVEVKEEANTAYQESIRKQTKD
Run BLAST on NCBI

transcript from alignment at sc0001463:48220..51909-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036460 ID=TCONS_00036460|Name=TCONS_00036460|organism=Clytia hemisphaerica|type=transcript|length=3690bp|location=Sequence derived from alignment at sc0001463:48220..51909- (Clytia hemisphaerica)
TAACGTTTTAGCAGACAGCTTTGCATACATCTCGAAAGAGGTTAGTATTT
TTCATTCAATATCACTTTGTTCACTTGTAACTTAAAATGCTTTTTTTTTT
TTTTGATACATTGTTAAATATTCTAATCCAACTCGATGTTTCTGATATAT
ACTTGACGTCGAGCTTAATATCCTAAGATACTAGTTACAGTCTGAAGCAT
CAAAGGTCCACCACATCCCAATAATTGGAATCTAAGAGGTTCAGCACTTG
CCAGAGGAAAAAGAAACACATTTAATTCTTTAAAAGTAACACCAATGTTT
TCATTTTTGTTATAGAGAAAGAGATGGGCTTGCTAGAAGCATTCGGGTTT
GAGCTCTTATTCATGTTAATTGAAGGGCTCTTTGTTTTAACACTTGGAGT
TTGCTGCTACATTTTGTCGTATTTCATCTCATGGTTTTACATTGTTGGAT
TTTTCTCCCTTCTTTATTGGTTTTTGGTTACCGAGAGAACTCCTTCACCA
CAAGAAATCCGAAAGCGTAAAGATACTTTTGTTGTCATCGTTGGTGCTGG
CTATTCCGGATTATGTGCGGCTATTCGGTTGAAAAAAGAACGTATCCGCT
TTGTTTTGATCGAGAAATCGGAAACACTTGGCGGAACATGGTGGGATAAC
AAATATCCAGGGTGTGCTTGTGACATCCCCTCGCATTTTTATAGTTTATC
CTTTAAACTGAACGCGTTTTGGACAAAGATGTATTCTTCAGGAGATGAAA
TTCAGGACTATTTAGAAGATACAGCTGATTATTACGGCATCCGAGAACAC
GTCAAATTCAGTTGCAAAGTTGACACATGTGAATTCAACAAAGAGACACA
AAAATGGTCAGTCAAAACTTCAACAGGTCACGAATTCGAATGCAATTATC
TCATCTCTGGAATGGGAGCTTTACATGTCCCTAAATTTCCCAGTTTGAAA
GGAATGGAAGAATTTCAAGGAGAGCATTTTCACACTGCTCAATGGAAAGA
CGATTTTGATTGGTCCGGAAAACGCGTAGGAATTATCGGTACTGGGAGCT
CTTCAATTCAAGCCGTACCGAAACTCGCCGAACGTTGTGAAGAGCTTTAC
GTCTTCCAAAGAACACCAGCTTGGATTTTCCCTCTCTTGAATTTGCGTTA
TCCAGCTATCATTCAAAAACTTTTTCAAGCTTTCCCATTTGTTATGAAGC
TTCATCGGTTATATTTTTTCTTCAGATCCGAATTTGTATTCGCCGCTTTC
TTCGGGAAAGTATCGTTAGCCCGAGAGATTATCTCTAATCTGACCAACCA
ACTCATGTCGAATGAAGTTGCCGATCCCAAATTGGCTGAGAAACTTATTC
CTAAGTACTCAATGTTTAGTAAAAGAATCACCATCTCGAACGATTATTTG
AAAACTTTTAATCGACCAAACGTTCATCTCATCACTGAACCGATTCAAGA
AATTACCCATGATTCTATTCTCCTTAAAAATAACCAAGATGCATCAGCGA
AAGAAGTTGAATTAGATGCGATCATTTATGCAACAGGATTCGACGTTTTG
CAAAGTTCGACAAATATGGATATCAAAAACCCAAATAACGGAAAGTCTTT
ATCAACAATTTGGGGAGAAACACCGAATGCTTACATGGGGATCATGCCAG
CCGGGCTACCGAACTTTTTCATGCTCTTCGGACCCGGAACTGTGCTAGGT
AAGATTTGTATTGATGGTTGTTGATCAGCTTCAGGGTTAGACTCTCACAA
ATTACACAAGCAAATAAATTTCATGAATAAGCATGAGCTTGTATTATATG
GATGAAAAAATGGATAAAGACTCGGGTTTGATTTTTATGTGTGATGAGTG
TGTGTTTTTCATGTGCATGGAAGATGAAGCTTTAATGAATCCATGCGATA
TTCATTTGCCACTACCGGCAGAAATCACATCATCATGAATAGTATGAATC
CCTTAATTTCTTCATGATTTCTTTTCAAATCTATTTCACTTTCATTTTTT
ATTTAGGGCACAGCAGTGCGATCTTTATGACGGNGAAAGAAGTGGAATTG
GATGCGATCATTTATGCAACAGGATTTGACGTTTTGGAAAGTACGAAAAA
TATGGATATCAAAAACCCAAAAAACGGAAAATCTTTATCAACAATTTGGG
GAGAGACACCGAATGCTTACTTGGGGATCATGGCAGCCGAAATACCGAAC
TTTTTCATCATACTTGGACCAGCAACAGGACTCGGTAAGAACTGCTCCAG
TTACATCAAAATACTATTCGATCTTTTCCATCTTCCTCTTTTTCAATTCT
TGATTACTTTCGAAAAGCAAACATTCAGTCCCCTGTCCATTTCAATTCTA
ACCTCTGTTTGAGCCATAGGCGAGCCAGTGCAGTCCTGATAAGTCCCAAT
AAGGACAAAGTCTATACACACTTTAAACCTAAATCTCCTGAGCGAATATA
GTTGGATAGAAATGATAATTTCTTCACGTATAATCCTTTAATTCTAAAGC
TAAATTGCACTGCCTTGGTTCGATTATCGGTCGAAGAGAGAGAGTGGTTT
TTACATTTGTTTTTTTGCTTTTAATTACAGGCCACAATAGCGTAGTGTTT
ATGATCGAGCGACAAGTAGATTTTATCATCAATATGATTACACAAAATAT
TGAACAAGGTCATGCAGTTGTTGAGGTATGTTCACATATTATATTTGTTG
ACGCAAGAGGTTCTTTTAACGTTCATTTAATGTTTTATTGATGTCATGGA
CATTATATGGATGCTTGTTTAACCACGGCGGCAAAAAATGGCCTTTTTTC
TCCCACTCGCTCAGCAACCTAATACAACTTGCGGCATTTTCGACCACTTT
GTTGATCATTATACACTTTTTGTTCCACCATCAACCTTTATATGAATTTC
CAAAATAAATTCCAAAAAAATTTAGAATATAGAAAAAAGAATTGTCACGT
GATAGCTGATGACGTCATCGAATTTAGAACGAAAAAATAAAAATTCAGTT
AGCTCTTTGGTAGTACGACCATTCGATAGCTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGTACGACCATTCGATAGCTCTCAA
TGAGTAGTGCTCGAAAATGGGGTCACTTGTTATCGAGACCCTTCTGAAAC
TCGAAAAATTTAGATTTTCGTTTTGCCAATATATGGTAAAAATCAACGAT
TGACCAGGTNAATTTTTTGAAATTTGAATTTTTTTTGCAAAATCATATCC
TTTAAGAATATCTATAGGTTTGACAACCTAACAGTCACTAATAAGCTAAT
TTATGGCCAGTGGGAGAAAATAACTCATTTTTTGCCGCCGTGAACGATAG
ATTGGGGTCACGCAGTATCAAGATTCAAATTAGATAAGACACTCAACGTG
TACAAATTTCAAATATTCTTGCTTGACCTTAATCTCGCCTTGAATTATCA
TAATATTTGCAATAGGTTCGAGCATTGATTCGCTGATATTGCAATATTTT
TTGAGACATACAGGTAATCATACGTAAAAATTGCTCGAAGCTAGTTCTAA
AGTCTTTCTTTTTTTCTTAACTTTCCAACTTAGGTGAAAGAGGAAGCGAA
CACAGCGTATCAAGAAAGTATCCGGAAACAAACCAAAGAT

Coding sequence (CDS) from alignment at sc0001463:48220..51909-

>TCONS_00036460 ID=TCONS_00036460|Name=TCONS_00036460|organism=Clytia hemisphaerica|type=CDS|length=7020bp|location=Sequence derived from alignment at sc0001463:48220..51909- (Clytia hemisphaerica)
GTGAAAGAGGAAGCGAACACAGCGTATCAAGAAAGTATCCGGAAACAAAC
CAAAGATGCCACAATAGCGTAGTGTTTATGATCGAGCGACAAGTAGATTT
TATCATCAATATGATTACACAAAATATTGAACAAGGTCATGCAGTTGTTG
AGGGCACAGCAGTGCGATCTTTATGACGGNGAAAGAAGTGGAATTGGATG
CGATCATTTATGCAACAGGATTTGACGTTTTGGAAAGTACGAAAAATATG
GATATCAAAAACCCAAAAAACGGAAAATCTTTATCAACAATTTGGGGAGA
GACACCGAATGCTTACTTGGGGATCATGGCAGCCGAAATACCGAACTTTT
TCATCATACTTGGACCAGCAACAGGACTCGATGGGCTTGCTAGAAGCATT
CGGGTTTGAGCTCTTATTCATGTTAATTGAAGGGCTCTTTGTTTTAACAC
TTGGAGTTTGCTGCTACATTTTGTCGTATTTCATCTCATGGTTTTACATT
GTTGGATTTTTCTCCCTTCTTTATTGGTTTTTGGTTACCGAGAGAACTCC
TTCACCACAAGAAATCCGAAAGCGTAAAGATACTTTTGTTGTCATCGTTG
GTGCTGGCTATTCCGGATTATGTGCGGCTATTCGGTTGAAAAAAGAACGT
ATCCGCTTTGTTTTGATCGAGAAATCGGAAACACTTGGCGGAACATGGTG
GGATAACAAATATCCAGGGTGTGCTTGTGACATCCCCTCGCATTTTTATA
GTTTATCCTTTAAACTGAACGCGTTTTGGACAAAGATGTATTCTTCAGGA
GATGAAATTCAGGACTATTTAGAAGATACAGCTGATTATTACGGCATCCG
AGAACACGTCAAATTCAGTTGCAAAGTTGACACATGTGAATTCAACAAAG
AGACACAAAAATGGTCAGTCAAAACTTCAACAGGTCACGAATTCGAATGC
AATTATCTCATCTCTGGAATGGGAGCTTTACATGTCCCTAAATTTCCCAG
TTTGAAAGGAATGGAAGAATTTCAAGGAGAGCATTTTCACACTGCTCAAT
GGAAAGACGATTTTGATTGGTCCGGAAAACGCGTAGGAATTATCGGTACT
GGGAGCTCTTCAATTCAAGCCGTACCGAAACTCGCCGAACGTTGTGAAGA
GCTTTACGTCTTCCAAAGAACACCAGCTTGGATTTTCCCTCTCTTGAATT
TGCGTTATCCAGCTATCATTCAAAAACTTTTTCAAGCTTTCCCATTTGTT
ATGAAGCTTCATCGGTTATATTTTTTCTTCAGATCCGAATTTGTATTCGC
CGCTTTCTTCGGGAAAGTATCGTTAGCCCGAGAGATTATCTCTAATCTGA
CCAACCAACTCATGTCGAATGAAGTTGCCGATCCCAAATTGGCTGAGAAA
CTTATTCCTAAGTACTCAATGTTTAGTAAAAGAATCACCATCTCGAACGA
TTATTTGAAAACTTTTAATCGACCAAACGTTCATCTCATCACTGAACCGA
TTCAAGAAATTACCCATGATTCTATTCTCCTTAAAAATAACCAAGATGCA
TCAGCGAAAGAAGTTGAATTAGATGCGATCATTTATGCAACAGGATTCGA
CGTTTTGCAAAGTTCGACAAATATGGATATCAAAAACCCAAATAACGGAA
AGTCTTTATCAACAATTTGGGGAGAAACACCGAATGCTTACATGGGGATC
ATGCCAGCCGGGCTACCGAACTTTTTCATGCTCTTCGGACCCGGAACTGT
GCTAGGTGAAAGAGGAAGCGAACACAGCGTATCAAGAAAGTATCCGGAAA
CAAACCAAAGATGCCACAATAGCGTAGTGTTTATGATCGAGCGACAAGTA
GATTTTATCATCAATATGATTACACAAAATATTGAACAAGGTCATGCAGT
TGTTGAGGGCACAGCAGTGCGATCTTTATGACGGNGAAAGAAGTGGAATT
GGATGCGATCATTTATGCAACAGGATTTGACGTTTTGGAAAGTACGAAAA
ATATGGATATCAAAAACCCAAAAAACGGAAAATCTTTATCAACAATTTGG
GGAGAGACACCGAATGCTTACTTGGGGATCATGGCAGCCGAAATACCGAA
CTTTTTCATCATACTTGGACCAGCAACAGGACTCGATGGGCTTGCTAGAA
GCATTCGGGTTTGAGCTCTTATTCATGTTAATTGAAGGGCTCTTTGTTTT
AACACTTGGAGTTTGCTGCTACATTTTGTCGTATTTCATCTCATGGTTTT
ACATTGTTGGATTTTTCTCCCTTCTTTATTGGTTTTTGGTTACCGAGAGA
ACTCCTTCACCACAAGAAATCCGAAAGCGTAAAGATACTTTTGTTGTCAT
CGTTGGTGCTGGCTATTCCGGATTATGTGCGGCTATTCGGTTGAAAAAAG
AACGTATCCGCTTTGTTTTGATCGAGAAATCGGAAACACTTGGCGGAACA
TGGTGGGATAACAAATATCCAGGGTGTGCTTGTGACATCCCCTCGCATTT
TTATAGTTTATCCTTTAAACTGAACGCGTTTTGGACAAAGATGTATTCTT
CAGGAGATGAAATTCAGGACTATTTAGAAGATACAGCTGATTATTACGGC
ATCCGAGAACACGTCAAATTCAGTTGCAAAGTTGACACATGTGAATTCAA
CAAAGAGACACAAAAATGGTCAGTCAAAACTTCAACAGGTCACGAATTCG
AATGCAATTATCTCATCTCTGGAATGGGAGCTTTACATGTCCCTAAATTT
CCCAGTTTGAAAGGAATGGAAGAATTTCAAGGAGAGCATTTTCACACTGC
TCAATGGAAAGACGATTTTGATTGGTCCGGAAAACGCGTAGGAATTATCG
GTACTGGGAGCTCTTCAATTCAAGCCGTACCGAAACTCGCCGAACGTTGT
GAAGAGCTTTACGTCTTCCAAAGAACACCAGCTTGGATTTTCCCTCTCTT
GAATTTGCGTTATCCAGCTATCATTCAAAAACTTTTTCAAGCTTTCCCAT
TTGTTATGAAGCTTCATCGGTTATATTTTTTCTTCAGATCCGAATTTGTA
TTCGCCGCTTTCTTCGGGAAAGTATCGTTAGCCCGAGAGATTATCTCTAA
TCTGACCAACCAACTCATGTCGAATGAAGTTGCCGATCCCAAATTGGCTG
AGAAACTTATTCCTAAGTACTCAATGTTTAGTAAAAGAATCACCATCTCG
AACGATTATTTGAAAACTTTTAATCGACCAAACGTTCATCTCATCACTGA
ACCGATTCAAGAAATTACCCATGATTCTATTCTCCTTAAAAATAACCAAG
ATGCATCAGCGAAAGAAGTTGAATTAGATGCGATCATTTATGCAACAGGA
TTCGACGTTTTGCAAAGTTCGACAAATATGGATATCAAAAACCCAAATAA
CGGAAAGTCTTTATCAACAATTTGGGGAGAAACACCGAATGCTTACATGG
GGATCATGCCAGCCGGGCTACCGAACTTTTTCATGCTCTTCGGACCCGGA
ACTGTGCTAGGTGAAAGAGGAAGCGAACACAGCGTATCAAGAAAGTATCC
GGAAACAAACCAAAGATGCCACAATAGCGTAGTGTTTATGATCGAGCGAC
AAGTAGATTTTATCATCAATATGATTACACAAAATATTGAACAAGGTCAT
GCAGTTGTTGAGGGCACAGCAGTGCGATCTTTATGACGGNGAAAGAAGTG
GAATTGGATGCGATCATTTATGCAACAGGATTTGACGTTTTGGAAAGTAC
GAAAAATATGGATATCAAAAACCCAAAAAACGGAAAATCTTTATCAACAA
TTTGGGGAGAGACACCGAATGCTTACTTGGGGATCATGGCAGCCGAAATA
CCGAACTTTTTCATCATACTTGGACCAGCAACAGGACTCGATGGGCTTGC
TAGAAGCATTCGGGTTTGAGCTCTTATTCATGTTAATTGAAGGGCTCTTT
GTTTTAACACTTGGAGTTTGCTGCTACATTTTGTCGTATTTCATCTCATG
GTTTTACATTGTTGGATTTTTCTCCCTTCTTTATTGGTTTTTGGTTACCG
AGAGAACTCCTTCACCACAAGAAATCCGAAAGCGTAAAGATACTTTTGTT
GTCATCGTTGGTGCTGGCTATTCCGGATTATGTGCGGCTATTCGGTTGAA
AAAAGAACGTATCCGCTTTGTTTTGATCGAGAAATCGGAAACACTTGGCG
GAACATGGTGGGATAACAAATATCCAGGGTGTGCTTGTGACATCCCCTCG
CATTTTTATAGTTTATCCTTTAAACTGAACGCGTTTTGGACAAAGATGTA
TTCTTCAGGAGATGAAATTCAGGACTATTTAGAAGATACAGCTGATTATT
ACGGCATCCGAGAACACGTCAAATTCAGTTGCAAAGTTGACACATGTGAA
TTCAACAAAGAGACACAAAAATGGTCAGTCAAAACTTCAACAGGTCACGA
ATTCGAATGCAATTATCTCATCTCTGGAATGGGAGCTTTACATGTCCCTA
AATTTCCCAGTTTGAAAGGAATGGAAGAATTTCAAGGAGAGCATTTTCAC
ACTGCTCAATGGAAAGACGATTTTGATTGGTCCGGAAAACGCGTAGGAAT
TATCGGTACTGGGAGCTCTTCAATTCAAGCCGTACCGAAACTCGCCGAAC
GTTGTGAAGAGCTTTACGTCTTCCAAAGAACACCAGCTTGGATTTTCCCT
CTCTTGAATTTGCGTTATCCAGCTATCATTCAAAAACTTTTTCAAGCTTT
CCCATTTGTTATGAAGCTTCATCGGTTATATTTTTTCTTCAGATCCGAAT
TTGTATTCGCCGCTTTCTTCGGGAAAGTATCGTTAGCCCGAGAGATTATC
TCTAATCTGACCAACCAACTCATGTCGAATGAAGTTGCCGATCCCAAATT
GGCTGAGAAACTTATTCCTAAGTACTCAATGTTTAGTAAAAGAATCACCA
TCTCGAACGATTATTTGAAAACTTTTAATCGACCAAACGTTCATCTCATC
ACTGAACCGATTCAAGAAATTACCCATGATTCTATTCTCCTTAAAAATAA
CCAAGATGCATCAGCGAAAGAAGTTGAATTAGATGCGATCATTTATGCAA
CAGGATTCGACGTTTTGCAAAGTTCGACAAATATGGATATCAAAAACCCA
AATAACGGAAAGTCTTTATCAACAATTTGGGGAGAAACACCGAATGCTTA
CATGGGGATCATGCCAGCCGGGCTACCGAACTTTTTCATGCTCTTCGGAC
CCGGAACTGTGCTAGGTGAAAGAGGAAGCGAACACAGCGTATCAAGAAAG
TATCCGGAAACAAACCAAAGATGCCACAATAGCGTAGTGTTTATGATCGA
GCGACAAGTAGATTTTATCATCAATATGATTACACAAAATATTGAACAAG
GTCATGCAGTTGTTGAGGGCACAGCAGTGCGATCTTTATGACGGNGAAAG
AAGTGGAATTGGATGCGATCATTTATGCAACAGGATTTGACGTTTTGGAA
AGTACGAAAAATATGGATATCAAAAACCCAAAAAACGGAAAATCTTTATC
AACAATTTGGGGAGAGACACCGAATGCTTACTTGGGGATCATGGCAGCCG
AAATACCGAACTTTTTCATCATACTTGGACCAGCAACAGGACTCGATGGG
CTTGCTAGAAGCATTCGGGTTTGAGCTCTTATTCATGTTAATTGAAGGGC
TCTTTGTTTTAACACTTGGAGTTTGCTGCTACATTTTGTCGTATTTCATC
TCATGGTTTTACATTGTTGGATTTTTCTCCCTTCTTTATTGGTTTTTGGT
TACCGAGAGAACTCCTTCACCACAAGAAATCCGAAAGCGTAAAGATACTT
TTGTTGTCATCGTTGGTGCTGGCTATTCCGGATTATGTGCGGCTATTCGG
TTGAAAAAAGAACGTATCCGCTTTGTTTTGATCGAGAAATCGGAAACACT
TGGCGGAACATGGTGGGATAACAAATATCCAGGGTGTGCTTGTGACATCC
CCTCGCATTTTTATAGTTTATCCTTTAAACTGAACGCGTTTTGGACAAAG
ATGTATTCTTCAGGAGATGAAATTCAGGACTATTTAGAAGATACAGCTGA
TTATTACGGCATCCGAGAACACGTCAAATTCAGTTGCAAAGTTGACACAT
GTGAATTCAACAAAGAGACACAAAAATGGTCAGTCAAAACTTCAACAGGT
CACGAATTCGAATGCAATTATCTCATCTCTGGAATGGGAGCTTTACATGT
CCCTAAATTTCCCAGTTTGAAAGGAATGGAAGAATTTCAAGGAGAGCATT
TTCACACTGCTCAATGGAAAGACGATTTTGATTGGTCCGGAAAACGCGTA
GGAATTATCGGTACTGGGAGCTCTTCAATTCAAGCCGTACCGAAACTCGC
CGAACGTTGTGAAGAGCTTTACGTCTTCCAAAGAACACCAGCTTGGATTT
TCCCTCTCTTGAATTTGCGTTATCCAGCTATCATTCAAAAACTTTTTCAA
GCTTTCCCATTTGTTATGAAGCTTCATCGGTTATATTTTTTCTTCAGATC
CGAATTTGTATTCGCCGCTTTCTTCGGGAAAGTATCGTTAGCCCGAGAGA
TTATCTCTAATCTGACCAACCAACTCATGTCGAATGAAGTTGCCGATCCC
AAATTGGCTGAGAAACTTATTCCTAAGTACTCAATGTTTAGTAAAAGAAT
CACCATCTCGAACGATTATTTGAAAACTTTTAATCGACCAAACGTTCATC
TCATCACTGAACCGATTCAAGAAATTACCCATGATTCTATTCTCCTTAAA
AATAACCAAGATGCATCAGCGAAAGAAGTTGAATTAGATGCGATCATTTA
TGCAACAGGATTCGACGTTTTGCAAAGTTCGACAAATATGGATATCAAAA
ACCCAAATAACGGAAAGTCTTTATCAACAATTTGGGGAGAAACACCGAAT
GCTTACATGGGGATCATGCCAGCCGGGCTACCGAACTTTTTCATGCTCTT
CGGACCCGGAACTGTGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021489XLOC_021489Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036460-exon-sc0001463-1575043694:51870..51909TCONS_00036460-exon-sc0001463-1575043694:51870..51909Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1575043694:50212..51594TCONS_00036460-exon-sc0001463-1575043694:50212..51594Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1575043694:49676..49903TCONS_00036460-exon-sc0001463-1575043694:49676..49903Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1575043694:49235..49329TCONS_00036460-exon-sc0001463-1575043694:49235..49329Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1575043694:48220..48276TCONS_00036460-exon-sc0001463-1575043694:48220..48276Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1510915933:51870..51909TCONS_00036460-exon-sc0001463-1510915933:51870..51909Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1510915933:50212..51594TCONS_00036460-exon-sc0001463-1510915933:50212..51594Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1510915933:49676..49903TCONS_00036460-exon-sc0001463-1510915933:49676..49903Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1510915933:49235..49329TCONS_00036460-exon-sc0001463-1510915933:49235..49329Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1510915933:48220..48276TCONS_00036460-exon-sc0001463-1510915933:48220..48276Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1491911889:51870..51909TCONS_00036460-exon-sc0001463-1491911889:51870..51909Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1491911889:50212..51594TCONS_00036460-exon-sc0001463-1491911889:50212..51594Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1491911889:49676..49903TCONS_00036460-exon-sc0001463-1491911889:49676..49903Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1491911889:49235..49329TCONS_00036460-exon-sc0001463-1491911889:49235..49329Clytia hemisphaericaexon
TCONS_00036460-exon-sc0001463-1491911889:48220..48276TCONS_00036460-exon-sc0001463-1491911889:48220..48276Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036460-proteinTCONS_00036460-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001463supercontigsc0001463:48220..51909 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.552026	1.86328	0.431393	0.374656	0	0	2.03132	1.69347	1.65145	1.47241	0.643815	1.30736	4.98124	1.62258	2.8467	3.57409	0.359761	1.33445	4.40469	0	1.48884e-07	0	1.73695	1.73702e-07	0.356405	1.87902	2.37756	0.0147023	5.48638	8.03496e-08
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000103Pyridine_nuc-diS_OxRdtase_2
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036460 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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