XLOC_020292 (gene) - C. hemisphaerica

Overview
NameXLOC_020292
Unique NameXLOC_020292
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001229:22982..31458-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020292 ID=XLOC_020292|Name=XLOC_020292|organism=Clytia hemisphaerica|type=gene|length=8477bp|location=Sequence derived from alignment at sc0001229:22982..31458- (Clytia hemisphaerica)
AGTATGGATGGACCGTTATAAAAGAATATTCTATCGAGCACGTGGTGGAA ATATGAACGAACCATTACCGAGGTAAAAATTATACAATTAGGAATTTTCA GCAGCATTTTTTTCAGTAGACAGCATTAGCCTCGATTTTTGCTGTCCCTA TCCTGATTCTTCATTACTCTTTTCCTAGACGGTATGTGGTACGTTCATTA TAATGAGTTTCTTAGGGTTTATGAAATTTCGGTTTTCTTTTTTAGAATCA AAGAACGACGTTTAATCAGAGAAAGACTGAAATGTCGTCCTTTCGATTGG TATCTGATGGAAGTCTATCCAGAGTTGAGGTAACTTTTAGGTCTTCGTTT TTATTAATTGATGGATATTTTTGTTTTGACTGAAAATTGTCTTTCGGTGC ACCAAACGAAAAATAAATCTGCTGCTTGGATTGGTGGCTTTAGTTCCCCC TTCTGTCAACACGCTACCGTCTCGAAATTATTTAGAACCAAGTATCATTT ATTTCAGAGTTCCGAATGTTGACGAGTTGGCTTATGGGGAGATCAAGCAA ATTTATAAGGGACAATCGTATTGCTTATCTGAGTCCAAAACTTCAAAGGT TTTGGCAGTGAAATGTATTCCCAATGTTAAGAAAATGGTAAGACTTTTCA TTGAAATTATTTTCTCCTGCTGACATGACAGATTGCGGGAATCGGGCGAT CGAAGGCTTTTGAACTAAGCAATGAGACATCTGGTGGGATTTAAGGCCTT TTTTATCTATTAATTTAGGTACAGACTATTTTTATCTTTAATTTTCAATT CATACGTTATTAACTCTCATACTAGAATAATGCATAATCAAGTTGATGAT CTTTAGTTATAAACAGTATTTTCGTAGCGTAAGATGCGTCTTTTCTTGCA CTATATTACTTTTCGCATTTTTCAACTGTTTTTCTATCGTTTGTTCAAAT TGTCAATTTCTTTTTCCAAATGGATAGCCATTTACCATGGCTTTTTGTGT TGGCCGTGTTTCACACAGTTTCCAAGATTAGAGACACGACCTTTTATGAA CGTAAGGTGACGTATCAGCAAAGTTGCGAGGCCAACTGATATCTTTAATA TTGCCTAAGCATTCAATGTCCGCATTTTCATTTCATTCAATATCAAATTT AATTGTCACTGTATCATTATACTGAATATTCGATAATCTTCCTTGATTGA TGAAGAAAATGGCTCCAACACTACCACTCATGATGCATTCTCCATGGGGT GTTTCGTAAAGCTTGAGAAACATTTGATCATAGGAACTTTTAGTAATATC CCAGTCCACCAATATACCATTTACCAAAAGTCTCATTTTGATTGTTTTGA ATTGCATTGGCCATTGGTTCGTGTCATCAAAAGGCCCCTTACTTATCCAC AATGACACAGTAACGTGAGTCTTCTTCTCGGAAATTTGACGGCTGAAATT CAAGCGCAGCAATGCTTTGTATGTACCAAAAACAAAGAAAGACGGTGATT CTGTAACGGTGTTGAATTCTTTGAATTCCTGGAATTTCTGCTGTAGGTTG GGTATAGTCCATACGAAAGTGCTTTGAAGGATTTTCTCACAACTTCTCAG CTTTCTTTCTGCACAGTGATTTTCACTTTCACTCTTTTTTTCTCGTTGCT GCATTTCGCTCTCATCATGTGATCTTTCTGTATCAACATTTTCAATTACA GGTTTCGATCCAGTCTTGATCCTGTTGATCTTCTTTTTGCTTTTGAACAC ATCAAATCCCATCCTATCTTTTATGGGCGACTGTATAGCTTTCTTTTTCC CTATAATAAAAGGTTTTAAAATCTCTAACTTATGTTCACACATCTTTAGT GGCTAATTCACTGGCCTACCATAATATCTTTATAATGCGCGTTATGAAAT TTGCCTTACTTCATATCCCCCTCTCTAAATTCAAATAAATTGTCTAGAAC CGAAAGACTGTCTTTTTCAAAATCTTTGCCCAACTTAGATTGATGTTTAT TCGTTTTGGAACGACTAATTATGGATTCTATTTTTTTAAGGACGACTTTT ATCAAAGATAAACAAGAAAGCTCTTACCTATTCTCTTTGTAAATTTGAAC GGTCTTTTTTGTCTTTTCGTTTATTTCTTGATTTCTCTAACATTCATAAC TCCTTTACTGAACTGAATTGATATATATGGTAGGAGTAGTCCTATACTCA TCAAGTTAATGTAGTTTTCTTTTCCCTAATATGCAAAAACTACCCTAACC ATATAAAAAATCAATAAAAATAGTAACTACCGGTTTGTTTATTTACTTAG GAATAAATAGTTTGCTAATGTGTTATTTTCAAAATACCCACGATAAAGTA ACAAAAATAAAACTCAGGGATAGTTCGTAGTGTATCACTTCAAGCCAGTC CATAGTAACGGCAATTTGTAACACATTGTTGCGAAATCACCCTCACCATT CACTGTTTGATTTCATTTTCCCCAATTCAAATTTTTGTAAATAAGGTATT TTAAATTTTTTTAAAGAAATCATCTCGTTGCAGTGGCGTTCTGGGAAAAT NGCATGATAGATTGTGGGAATCGAGGAACCTAAAAGCTTGTGAACTAGGC AAAGAGATATATGCTGGAATTTGAGGCCTTTTTAATCTATTAATTTAGTT ACAGACTATTGTTAACTTTAAGTTTCAATTCATACGTTATTAACTCTCAT AGAATATTGTATTATGTATGACGATCTTCTGTTATAAACAGTATTTTCGT AGCGTAAGATGCGTCTTTTCTTGCACTATTATTTTTCGCATTTTTTCAAC TGTTTTTCTATCGTTTGTACAAATAGTCAATTTCATTTTCCAAATGGATA GCTTTTTTTTCAACTTCCATTTACCATGGCTTTTTGTGTTGGCCGTGTTT CCAGTAGTTTCCAAGATTAGAGACACGACCTTTTATGGACGTAAGATGAC GTATCAGCAATGTTGCGAGGCCAACTGATATCTTTAATATTGCCTAAGCA TTCAATGTCCGCATTTTCATTTCATTCGATATCAAATTTAATCGTCACTG TATCATTATACTGAATATTCGATAATCTTCCTTGATTGATGAAGAAAATG GCTCCAACACTACCACTTATGATGCATTCTCCATGGGGTTTTTCGTAAAG CTTGAGAAACATTTGATCATAGGAACTTTTAATAATATCCCAGTCCACCA ATATACCATTTAAACAAAAGTCTCATTTTGATTGTTTTGAATTGCATTGG CCATTGGGTCGTGTCATCAAAAGGTCCCTTACTTATCCACAATGACACAG TAACGTGAGTCTTCTTCTCGGAATTTTGACGGCTGAAATTCAAGTGCAGC AATGCTTTGTATGTACCAAAAACAAAGAAAGACGGTGATTCTGTAACGGT GTTGAATTCTTTGAATTCCTGAAATTTCTGCTGTAGGTTGGGTATAGTCC ATACGAAAGTGCTTTGAAGGATTTTCTCACAACTTCTCAGCTCTCTTTCT GCACAGTGATTTTCACTTTCACTCTTTCTTTGTCGTTGCTGCATTTCGCT CTCATCATGTAATCTTTCTGTATCAACAATTTCAATTACAGGTTTCGATC CAGTCTTGATCCTGTTGATCTTCTTTTTGCTTTTGAACACATAAAATCCC ATCCTATGGTTGACTGTAGTATAGCTTTCTTCTTTCCTATAATGAAAGAT TTTTAAGCCTCTAACTTACGTTCACACATCTTTTAGTGGCTAATACGCTG GCCTACCATAATGTCTTTATAATTCGTTATGAAATTTGCCTTCCTTCATA GACCTCCCTCTAAATTCAAATGAATTGTTTAGAACCGAAAGATTGTCTTT TTCAAAATCTTTACTCAACCTAGATTGATGTTTATTCGTTTTGGAACGAC TAATTATGGATTCTATTTTTTTAGGACGACTTTTATCAAAGATAAACAAG AAAGCTCTTACCTATTCTCTTTGTAAATTTGAAAGGTCTTTTTTGTCTTT TCGTTTATTTCTTGATTTCTCTAACATTCATAACTCCTTTACTGAACTGA ATTGATATATATGGTAGGAGTAGTCCTATACTCATCAAGTTAATGTAGTT TTCTTTTCCCTAATATGCAAAAAATACCCTAACCATATAAAAAATCAATA AAAATAGTAACTACCGATTTGTTTATTTACTTAGGAATAAATAGTTTGCT AATGTGTTATTTTCAAAATACCCACGATAAAGTAACAAAAATAAAACTCA GGGACTTTGATAGTTCCCTAGTGTATCACTTCAAGCCAGTCCATAGTAAC GACAATTTGTAACACATTGTTGCGAAATCACCCTCACCCTTCACTGTTTG ATTTCATTTTTCCCAATTCAAATTTTTGTAAATAAGGTATTTTAAATTTT TTTAAAGAAATCATCTCGTTGCAGTGGCGTTCTGGGAAGATTTTTCTGGA GGGGCCAAAGTCAATTTTTTAGAATGGTGCCCCCAATCTTCCAAAGTGGT GCCCCCACCCACCAGTTTTTAAACTTTTATTTGCCTAGGCATAATGAGGA AGGAAATATTAAGTGGATAAGAGTAGAGTAGAAAATTTTTGAAAATTGAC TGCCAAGATACCCTAAATTACTTAACAAAAATAGAAAAATTTGACACTTG CTAGAGTGAAAAGAAACTTAAACAAATAATGCGAGCGAAGCGAACAGAAA AATTTGATGTTTTTTTACTTCAATATTGTAATTAGATTTTCATTTGATAA TGCTATAATGTACACACAAAAAACTTAGGTAGATTACAAAGAAGTTGCCA ATTAACTTTATTGCAAGTGAATCAAAATCATTGCAAGTAATTTAAAATTA TCTCAGTAAAATTGCTCCTGGGGCGCAACATAAAGTATGATTTTTAAGAT TGGGGCGTTTCAATAATCTCTTTTGGCGCCCCTTGCTCTTCGGCGCCCCT TCAAAAAAGGTCCGCTGGCCCCCACTGCCAGAATGCCACTGCTCCTGTAA AAATTTGCGTGCTGGATAGTTCTATACCCTGGGAAAGTGTTTAGAGGGAC AAATCAATTTTATTCCATAAACCCAAATTTTTAATTAATTTTGTCTCGAA GCGCCTTTAAAAGGTTCCGTGTGATTGAAAATCTATATTGGACAGTTCAA AAAACCAGTAGAACGATACATGAAACCATCGGAGAGGAGGGGCTTTTTGT CTGGGTTACCATAGATCTGTTGTATTTTCAAGACCAACGATATTTTTGTA TTTCACTTGCCAGCAATGGGTAATGTCAGTAACAGGAATGATTCAAAACG AAAAAGACAAATGTTTATATGCTTCAAAGAAGAGAAAAAGAATATCTCTC AAAGATTGTGACAACTCCGATTTTAATCAGGTAAAGTTGTTTTTTTGAAA AAATTTATCCTTTTGAGCGAAAGGTATATCCCTCTAAATTTAAATTTGAG TCGCAAAAATGGACATGGCAAAACTTGATTTTTAAAAATGCTGAAAAGGC TAGTTCTTGACTACCGGTATTGAATCTCACGTATTTCACCAATCAATTTT CTTGTGTCTATTGTTATTGAATCGGGAGTAACCTCGTGACTAAAAAGTAA TACACGCCTTCTTCAGACATTTGAAATTGGACGCTAATTCTTCCAGTTAA GTCCTCACACTTTATTGACCCACGTTTATTTTGCACAAGAGAGTATTTTT CACATTGCCATCGTGTGTCAGCCTTCAAAATTACAGCAAGGAATTATACT GACTATATGATAATTTGATGGTGTTCTTGAGTGACTCTGATAACTACAGG GCTTTGTTTACATTTTTTTAACATTCAGCATTGGAATTTTATGATTCGTG AACGGTTACGTCATCAAGCAACAAATCTATGCATCGAAAGGAAATCGGAT GGCTCGTTACTCATAGCAAGATGTGAAAATTTCAGTCCACAACAGACATG GTCTTTTACTACCAAATTTCTCTTCTGAATTATTGGTGATAGAATGCTCA CTTTATCTACCATTATTGAGAGTAGAAAGTAAAACTTCTGGTGAAAAAGT AGAATATGTCGATTCTCCAACTGTTATGGTAGCAAATTTATGGTCAGAAA ATAGTGTGAGATAAAAAGAAAGTAGATAGGCAAATCATGTGTTGCTGATG AAAGTACGTTTATTATACACGAACGAAGACCTTTATGAATGAAGGAGTTT TTAGATGAAATTATTNATAATGAGGAAGGAAATATTAAGTGGATAAGAGT AGAGTAGAAAATTTTTGAAAATTGACTGCCAAGATACCCTAAATTACTAA ACAAAAATTTGACACTTGCTAGAGTGAAAAGAAACTTAAAGAAACAATGT GTAATGCGAGCGAAGCGAACAGAAAAATTTGATGTTTTTTTATTTCAATA TTGTAATTAGATTTTCATTTAATAATGCTATATTGTACACACAAAAAAAC TTGTAAATTAGGTAGATTACAAAGAAGTTACCAATTAACTTTATTGCAAG TGAAACAAAAACATTGCAAGTAATTTAGAATGATCTCAGTAAAATTGCTC CTGGGGCGCAATTTTAGGCGCATGAAGTATGATTTTTAAGATTTGGGCGT TTCAATAATCTCTTTTGGCGCCCCTTGCTCTTCGGCGCCCCTTCAAAAAA GGTCCGCTGGCCCCACTGCCAGAACGCCACTGCTCCTGTAAAAATTTGCG TGCTGTATAGTTCTATACCCTGGGAAAGTGTTTAGAGGGAAAAATCAATT TTATTCCATAAACCCAAATTTTTAATTAATTTTGTCTCGAAGCGCCTTTA AAAGTTTCCGTGTGATTGAAAATCTATATCGGACAGGTCAAAAAACCAGT AGAACGATACATGAAACCATCGGAGAGGAGGGGCTTTTTGTCTGGGTTAC CATAGATCTGTTGTATTTTCAAGACCAACGATATTTTTGTATTTCACTTG CCAGCAATGGGTAATGTCAGTAACAGGAATGATTCAAAACGAAAAAGACA AATGTTTATATGCTTCAAAGAAGAGAAAAAGAATATCTCTCAAAGATTGT GACAACTCCGATTTTAATCAGGTAAAGTTGTTTTTTTGAAAAAATTTATC CTTTTGAGCGAAAGGTATATCCCTCTAAATTTAAATTTGAGTCGCAAAAA TGGACATGGCAAAACTTGATTTTTAAAAATGCTGAAAAGGCTAGTTCTTG ACTACCGGTATTGAATCTCACGTATTTCACCAATCAATTTTCTTGTGTCT ATTGTTATTGAATCGGGAGTAACCTCGTGACTAAAAAGTAATACACGCCT TCTTCAGACATTTGAAATTGGACGCTAATTCTTCCAGTTAAGTCCTCACA CTTTATTGACCCACGTTTATTTTGCACAAGAGAGTATTTTTCACATTGCC ATCGTGTGTCAGCCTTCAAAATTACAGCAAGGAATTATACTGACTATATG ATAATTTGATGATGTTCTTGAGTGACTCTGATAACTACAGGGCTTTGTTT ACATTTTTTTAACATTCAGCATTGGAAGTTTATGATTCGTGAACGGTTAC GTCATCAAGCAACAAATCTATGCATCGAAAGGAAATCGGATGGCTCGTTA CTCTTAGCAAGATGTGAAAATTTCAGTCCACAACAGAAATGGTCTTTTAC TACCAAATTTCTCTTCTAAATTATTGGTGATAGAATGTTCACTTTATCTA CCATTATTGAGAGTAAAAAGTAAAACGGCTGGTGAAAACGTAGAAGATGT CGATTCTCCAACTGTTATGGTAGCAAATTTATGGTCAGAAAATAACGTGG GATAAAAAGAAAGTAGATAGGCAAATCATGTGTTGCTGATGAAAGTACGT TTATTATACACAAACGAAGACATGAATGAATGAAGGAGTTTATAGATGAA ATTATTGCCTTTTGGTTTCATCTGACTGATTACTGTACATTAAGTTAACA ACGTATATGGATTGCTGGCAAGGAAACATTGAAACCGAATGGTAGATTCA CAAAATTGTGTTTAGGGATATTGTGACCACAATCAAAGGATAATTTGATG AATTATATGTTAGGATTATCTTGATCAGATTGCACAAGTATACACGAAAC CTTCTTGAAAGTGAAGAGTACTTTTGAACCGATAGTAAAGTCGTTCTCGG CTATCTCAACAACACTGAAAAAAGATTAAAAATTTTTGTGTTCAACCGTA TTCAAAAAGATTAAAGATGTCGCCAATGTGGAACAATGGAATCACGTGGA ATCTAAAACGAACTCAGCAGCAGATGTTGGTACTCGTTGTTGTCCTCGGA AAAACCTCAGAAATCTTGCAGGAACATCAAAGATAAAATTGTTCTTAATG TAGTTCCTTCTTTTTACTTAGAGCCATGGTTACTTTAAAAACTATATAGT CTTTCATTTCTTATAAGAATATCTAGGGACGCCTTGCCTTTTCTTGTCTT ATTTTTTCTTTAACAAACGCAATACTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00034879TCONS_00034879Clytia hemisphaericatranscript
TCONS_00034878TCONS_00034878Clytia hemisphaericatranscript
TCONS_00034877TCONS_00034877Clytia hemisphaericatranscript
TCONS_00034876TCONS_00034876Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00034878-proteinTCONS_00034878-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001229supercontigsc0001229:22982..31458 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.29 3.31 0.84 0.58 2.05 1.79 5.23 5.45 4.17 4.75 4.8 3.02 7.57 6.18 7.84 7.79 8.1 8.82 6.9 6.15 7.2 5.67 5.41 6.41 6.17 8.17 6.88 6.34 12.21 11.29