XLOC_013764 (gene) - C. hemisphaerica

Overview
NameXLOC_013764
Unique NameXLOC_013764
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000501:111145..115207+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013764 ID=XLOC_013764|Name=XLOC_013764|organism=Clytia hemisphaerica|type=gene|length=4063bp|location=Sequence derived from alignment at sc0000501:111145..115207+ (Clytia hemisphaerica)
ccaatcccaagaggagtacttggtaacgtgatcaaaaactgagcaaatcg
atttttatcttttgatattaacaaaggaaaaagataacaaaaagttaaaa
caataagcttccagaccagggttttatacggactatgatttGATGCAGCT
GCTGTCATGTGTGACAGGTATTACTTGACGTTGAATAAGTTTCTAATAAG
TGTTCATTCGAGAGAAATATTCTTGAAAACAATCCATTACTGAAACCTTG
TTGCTATTTGCTGTGTTGTCAACATTCGAGACATGAGTTATccagaaatt
tcaaaagattggTTACATCGACGTGGCTTTaccaccaaaattttttttct
acaaaattttGTGTTTGGGATGGAATATTCATTGACCTTTGTCACTTTGT
ACATTTATTTAAAAGACGTCTTAAAATCACAACACGTCGATTTTTTCTAT
AGTCTCATATCCGGCAGTTATTTGGGATTCATAGCGATAGCTGGGCTAAT
TATGAGTAAATTGTTCGACAATACACGACGAACCCGTCTCTTGTTTATCA
TTGGAAATATTTTGACGTGTTTTGGAAACATCCTTTATACAATCCCTTAT
TCGCCTTGGTTGCTGTTCGCTGGCCGCACCATATCAGGTAGAAATATtta
taatcaaaaaaattataatttgggaccgccaaagacgggggtaaatcGTG
TGGAATCAATAAAAAATGTGATCTCAGGATCAAGGCCTCCTAAAACCACG
GGATAAGTTCTAAAAGTAATGTTATCATAAAATGAATGCCCAGTAAAGGT
TTGGTGGCCATATAACttcaattttcatgaaattatgagcaattttctaa
aattcaaaatgacaGACGACCTAGCAacaaaaaatggcttttagcAAGGT
GAGCGCTTCGTCCAACCCCTAtgttgttatacatttttgaaaccttttat
CCAAAAGAAAAGTACGTTATTCAATTCTTTCTTGGAAAAAGTCCTTTTTA
AGGATCTTAGGCTTACTCCCCGGCATTAAGACAAAGATATCatgaaattt
caacctttttttcaCAAGATatataagaaaaagaaatatgttATATTCAT
TCGCGCTCTGTTGGCTTTTTAAGCtcaaaagtttgaagatttttgagaaa
tcgcAAAGTTTGTCTACAAAACATCCACGATGGTGtgtagaaatagaaag
ttctctCCATCCGTGGTGCTCCATTTTACAATCTCaccattctggtctgt
aaaatgcataattttgaaaaaaaaaaaaaaaaactttatctcAGGAACCT
TCCTACCAAGTTTTAATGCTGTAGCAttaatagaaataaaaattattaat
aaaagcatttttaacataacccccggatttttcgttttaaccatgatttt
ttcaaaaaccttcAAGAANTTCCTACCAAGTTTTAATGCTGTAGCAttaa
tagaaataaaaattattaataaaagcatttttaacataacccccggattt
ttcgttttaaccatgattttttcaaaaaccttcAAGAATCGTCCgatttt
cgatgaaaatttgtttCGGCCGAAAATCGccttttttgcagattttcatt
gaattttttcgtttaatatttttgtttaagaATGCCCACagttaagcatg
gttcaattttcaaggaAACTGACTTTGATAGCCGGACCTTTCTAAATATC
GTCAGAACAGCAGAgaatcgccggaaaaacggttttcCATTCCGGAAAAA
TTGGTTTATTAAGTGATTATAATTTGGATTTTGTAGATTTCGAATATTTA
TCATTTGTTaccctcattttctttttccttaCACCTTATATATCCcccaa
tcaacaatcaatgttgaaatttaatgcgttatgctTTTTCGCTAacacta
tattttctgactgattgttgTCACATTTCTATacagctttcatcatcagg
taggtccattcagcatacaTTCAACTTGTCAAATCAGGTTTTCACGCCGA
TTCCGAATCTGAATTTTATTTTGTCATAGCTATTACGCTTGACCTTATAT
AGAAGGCTTTATTTATTCAgaaaatatcgcaaaaatggtacgaaatcaat
atttttgaaaggaGATTCCGGATTTCAAATTCGGAATTagcatgaaaaat
taatttaaaaaagatagttaAACATAGATATTTCCAAATAAAGTCATttt
tggaccccccccccccggaatgaccaaaaaaaaaaaacttccggttctgc
ccccccccccccaaaaagaCCAAAATAAAACAACTTTCCGGACTGACCGA
TCCACCTCAAAAATCTAGGGTCGATTGACGGCAAACCAAGAATTATCTTT
TTAAGTCCAGtcttattctcataaaaaaagtagTCTGACGCCTTTTAATT
ATTATCTTTTACAGGTTTAAGTGGATACATATCCCCTATCTTGACATCAG
AGATTGCTCGTTCCTATCCACGAGATGAAGTTTTAGGGAAACTATCAACA
TTATGCTTTTCCTTCTCGCTGGGTTTGATAGGCGGTCCGTGTATCAATTT
CGCCTTTATACGAGCTGATTTTCGGTTATTTGGTGTTCATATTGGATATG
CTAACGGTTCTGGTTTGGCTCTCACGATCATTTACTTTTCAATGATGATC
TTATCGTTTTTTGTGAGTGATCTCTCAAGAGAGTTTGATTTGAAAGAAGC
AACAAGGAATTACCATCAACATAACAAATCTTTGGAAATAGAGAAAGCAA
CAGAGGTAGATTCATTTGAGAAAACTGATGAAGCATTGAAAGAAAGTGAT
GTTCAGACATCAATACTGCCGACAAAGCTAGAGCCAGACCAAGAAGAACC
TTTACTAAACACTATTGAGACAATCAAACAACTGTTAACTAATATAGATG
CTATGATTTTATTGATGATTgcgtttttcttttcttactCAATTGTTACA
TTTGAATCTTGGATCCCCATGACATGTGTTAATTTCCTGCACTGGAATTT
GGCTGAAATCAACGCAATTGTTTTGGCGACTGGTGCTGTTTGCAGCATAA
GTCTTTCAGGTTTCGCTGTTATTAACGTAAGTCACTTTGCTTTTCACCTA
TTGGCTGTCTGCAGTTGCATATCATTGGCGTTTGTTTACgtaatgttttt
atatttcCATTGGTACGGTGGTTTGATTTTCGCCGTCGATATAACGATTT
GGATATGCTATACTTTCTGCTTTTCACTCCTCGCAATTGGCTTTGAAATG
TTCACGTCGATAACATTAGCTTTGATGGTACCTTCAAGAGTACAAACTTC
CGCTGAAAGTATCCGACTAGCTTTTTCAAGTGGCGGTGCTTCAATTGGTA
TGTTTACGGCTGCGTTCCTGTTTCACGTATTATCGTATTTCAACCCTATA
TGCATTGTTCTGTGCTTTGTTCTGTCTTCTATGTTAGTGTGGAGacggaa
atttttccaaaatccgAAAGAAATTTTACATTAGACGATTTTTGATTAGT
AGTAGAATTCACTAATTTTgatctcattattttttttattttttgaaatt
ccactTTATAGGAATTTTGGGTTCTTAGTAGGGGTTCTtatcacagatct
gtaaagcccgaaaggctagatccGCGGCCTTTATTTTGATAGGATTTctt
accaaagaaatcacgtgacaacaagcaatttcactggtttgagagtaAGG
ACCAACCTTAACCATAGTTTTTGTTTCGACGCTGCGAAGACAGATTTTAG
GGCGttgaaaaacattgttctaCCTTTAAATTTTCTTCGTTTGTAATTAT
ATTTGGAATTAGGTTTATTATCATACAACTGAGGACCATTTATTTCTCCC
TTGCATAgaattttaatatttaaaattaGTTATAACTCactacaatcagc
gccgaaatatttggcacaaaaggggaattccgtCAAAACTTTgtaaccac
aagtgatttttaagtgctttgaagtacagttcggaagtagagttttaact
ctgaatttaacattagacttaagacttaaggccggtttccacttgcgcgt
gctgtgatcgcac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024505TCONS_00024505Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024505-proteinTCONS_00024505-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000501supercontigsc0000501:111145..115207 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.39	3.5	1.96	2.48	0.32	0.17	0.12	0.15	0.19	0.15	0.11	0.16	0.1	0.12	0.02	0.04	0.11	0.15	0.07	0.04	0.62	0.6	1.94	3.43	3.36	2.42	0.27	0.34	0.37	0.54