XLOC_012457 (gene) - C. hemisphaerica

Overview
NameXLOC_012457
Unique NameXLOC_012457
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000408:205535..211722+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012457 ID=XLOC_012457|Name=XLOC_012457|organism=Clytia hemisphaerica|type=gene|length=6188bp|location=Sequence derived from alignment at sc0000408:205535..211722+ (Clytia hemisphaerica)
gatttttttaccgCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaa agaaaatttttacgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAG GTTGGCCAGTTGGCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGA TCTTTCATGTCAATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACA GCTTTACAGTGTAATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACA AAACAGTGGTTTTGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAG GATACGAAACAAAAGATTCTTGATGTTCATCCAGGCACTAATGTTATctt gttgaaatattttgagaatcTGAGAACCTTGGATCCTTTACCAGGACAAT TGGACCTGGTCGTTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGAT GGAATCCATCTACTTTGCCATTCACAAGGTACCAACGCTTAACATTTTCT ATTTGACTACTTCAATTATTGATGAGAATTTTCCATGTCCAAGTAATCAT TAAAgtgattttcaaaatcttggaATCGAGATTTAAACCTTCCCGGGTCA TCTATtccatcaaaattttattgaaattaagGTCTATAGTTggtaaattt tccaaagtggtcaACGAAACAGGGGTGTTATTTTTTACATTTCACAACAC TTCAGGTGGTTTGATGTGCTTGGGAGCAGTGCTGAATTTGAATCATACAA TTGACACCTTCATCTCTCTATCCGGTCCTTTGTTTGGCCAATATGGAGGT AAAGACATTATTTTGCTACACAATATTCAGATCTCTTAAATCCAATTTTC GAGGGGAATTAGATTTTCCATAGGCTTttgctcatcctctagcaaaAAAG GTTTCTTATAGATTCTacataggaagtatatctatagaggtctgcgattc agactagatttacaaagaataagggagcctatcaaATAATAAAACGTCAA ATTATAGAGCAGAAACAGCAATTTGACTTCAACATATCTTTTTTAGCATC CGTTCTCTGAGAAAAGAAATACATATAAGACCCTTTTAGCATTTGTCTAA AGCTGTCTAAAACATATTTTAAGTCCaatgaaatctttctttttgaatAT CACGCAATATATGGtatgaaaaaaagaaacgatTTACTATTTATAGTTCC TGCTGGAGTTTTCGATGAAGTACCAATCATGAAACCATTGCTCAATTTGT CCAGAGAACTTGTAAGCATGTAAGAAttttattcttcattttgaatttta acatCGAGGCAAGAAAATGTAGGTTGGTGACATCCACCAATGATTTCGGG CTCCCTATACTACCTgcagttttgtagaggtctgcgattcagttTAAGTA AAACTGTTTATACAGTTCACTTTATGTACAGTATCTTCAATTTCCCTGAA AGATATTGTTTTCGTTTAGTAAAATTTGATATCTTTTTAAATGACCGTCC TCTGACCTACCttctttgtttaaaaaaaatgtttatctttGAAGGTTTAT GGCATAAAAAGTATCCGTGGTACGGTacaatgtttgttttttgtagAGTT TTATGATGATGACCACAATTTTATACATTTTCTTTCTAGACCAATTTATT CTGACCTTTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAGGtatc aatttcaatttataaaCTCTCAGTGTTTTTTTCCTGTCTATAACGCATGT TAGATCCCCCTTCTCTAGACTACTTGCCCCTAAACTTCAGCaaattttct ctccatctataaaTCATTCTACCTCCACTTTTAAATCTCATAATAGTTTT ACTAAACACTATGAAACATAAAAACCTTTATTATGCCGATTTTGTTCTTG GAACAGCACCATCTAATTTCGTTCATCATTGGATATCATCTGAGACAcgg ttgtttttcatttttcctttaGATCCACGAGATTCGATGATCGAAGCATA TGAATATTATTCTAATTATGTACCCGTCATTCTGAACGATCCAAGGTCAC GTTATTATAATCAAAAAGGTACAACCAAAAGTTTGTTAAAAGATTTCTGT CTGctcgagtgacttagggcaagtctcaaaaaccNCAACCAAAAGTTTGT TAAAAGTTTTCTCTCTGTCATGCCTTGACTGAAACGATCGTTGTAAATAG TTAGTATTCTCTAATGTAGATTATTGACTAAACAACAAAGAGCCTGAGCC TGTCAAAGAGTTGATACAAATCCTTCTTCTCATTCTTTTAGATGCAGCAA TtcgcaaagaaaattttcttcgtttgaAGAACCTGGTTTTAGTTGGAGGA CCTGGTGATGAAATCATTACACCTTGGCAATCTGCGTACGTTGACCTCTG GTTTCTTATGACCTTTACCAGAATGTTGACGATATCTCTtctccccgggg gggggggcactcgatctgaaaacgaccatacgttcggcccaaaatttggc ttctaaaatcggacccttacagtgcagtgaatttccatgaaaaatcatac ccttacagtgcactttttcaaaatttctcgcccgtaagggtgaaaatttt tgcgattttccaagaaaatgtgaaatttttgcctccaaaattgaccaatt ttgtgccaattttaccaaaaaattggccttttatcacaatttcctaccct tacagtgcagttcagtccaattttgtaatttcctacccttacagtgcact agctgaactatgaaaaaacctacccttaagggccgaacgctcaggcaaat taaggcctgtccagatttttcaaacttagcttaattttttatcaccgttt ccacttgtcatagcatatcacttcatacatcgaaagaagcgtattggact gtagatcactggaattgctgtgccataattaattttttcacccaaaaaaa gatattaggcaaaaaccaaaaaatgctgacgtcagcaaaacttgtttttT GAATAACTCCAGTTTGGCCAGGCCAGTATCACAACCCGATTCTACAAAAA ATGTAGTTCTGTAAATTCTAGAATCTACAAAATGTGTAGATTCTGTATTA TCAGAAACTACATaatatgtagatttcaaaatctACATAATATGTATATC AATATGTATATCCTAGAAGATTCTAAtagtgacgtaatgttttaaaaCAG GCCAAAATCACTCCAGAATCAACCAAATAAGTAGAAGTGTCAACGATTTT AATTATGTGCGTGCTTGAATTAAATTcaagctccaaccctgaccctaact gtcTAGATAGTGCGTGCTCGAATtagtttcgagctccaaccctgacccta tcTGTTTAGATAGTCAATTTCCCGGGATTACGCCATCCACAACCCCAACC AAAAAGTGACTGAACCGTCCTTAGCGATTCATCCTTTATATACTAAGAAC GCTAAATAACTCATTGTGGTTTATACAATATAGACCTATATGTGGAGCAA TACTCCATCTTTTCCGGTTCTACAAAATACGTAGAAATTCTAGAAACTAC AGAATATGTAGATTCTGTGCTATCAGAAactacatatattgtagatttcA ACCAATTGACAGAACTACATATATTGTAGAACCGGGTGTGATGATGTGTT GGTTTGGCTtatggtaaaaacatgaaatttggaccaaagttgcacacaat taaaaggatcattttgaaaaaaaattttttttgaaattttgctgacgtca gcactttattgcaaaatttcgtattttgctgatttctgctgacgtcagca aaatttttaaaaaaaattatgcaaaaatgttcctattattgatatgaaat ttggaccaaagttgcacacaattaaaaggatcattttgaaaaattttttt tttgaaattttgctgacgtcagcactttgttgcaaaatttcgtattttgc tgatttctgctgacgtcagcaaaattttcaaaaaaaattatgcaaaaatg ttcctattattgatatgcaacttttgtccaaatttcatgtttataccata agccaaactggagttattcaaaaaacaagttttgctgacgtcagcatttt ttggtttttgtctaatatctttttttgggtgaaaaaattaattatggcac agctattccagtgatctacactccaaaaggcttctttcgatgtatgaagt aATATgatatgacaagtggaaacagtgataaaaaaataaggtaaatttgg acgtgccttaatttgcctgagcgtctggtaggtcatttaccttgagtgcc ccccgggCTCTTCTCGTAACCTGTTGGAATGAAAGACATTTTTTCAAAGG ATGAATTGATTCTGTCGTGACAATAAAATGTCAAGAGAATTCTAAAATAA GCTTTCcaaagaaatttgatttattggATAACTAGAATATTCTTCTTTCG TTGCAGATTATTCGGTTTCTATGGGAACGATCCATTCAGCGAAACGATGC TTAATATGACTGAAACGAAGGTAATAGACTATTATTTAGAATCCATGCCC TTTTCATGCAAGCCTCAGGGCTCAGGGCAGGGATAATTAATGTGTTAAAA ACTTAGAATAGAGATTTGAatcattttttctgaaaataattatttcaggC AACATCTTGGGGCACCCCCTTCCCCTAGGCCCATGCGTAATCGTCAGATA GGTTATTGTAAAGAAGCCGTAAGTGATTTTTAATTGCTCTAACTAACGGT CGAAAAGGAGAGTTATACCTATATTTTGACAAGCATCAGATCTCtctaaa atatgttttgttctCTTTCATTCGATCATAGATGTACCAAGACGATTGGT TCGGCTTAAAAACACAAAACGACCAAGGGCGAGTGACGTCATATGTCATC CCTGGAATCGACCATGACTCTTGGCCTGGCTCCGATTTTGTGCTTAAGTT AGCTGTATATCCTTGGCTGACTTAAGAGAAGAATCTTTGATGATTGTTTT TTAACTGTAGATAAATTGATgatttatagttttgatttgtagatatattt tttttattgacttggAGTTAATGTTGGACCGTTTGATACATGGGGACAGT ATTAGGGGCAAGATCAATAGCTGCATAATAATttataagtttttgttcct tttttgatattttttgcaatTAAGAATTTCGTAAATCAAAATCCAATAAC AAAACcatacaaaatattttcttagcCAAAATTTGACAATTCTAATTCTA GCGATTATAAAAAAGCGTACAAAAATCTCTACGAGTGTTATAGAAAGTTT TACGTTATACGTTACGACAGAGTATATTATAAGGTTATATATACGACAAT AATAAGCAATGATATGTAAATAACATGAAATTTTATAGAATATGTTCACA ATACAAGCGCCAGACCCATTTTTACATCACTACACCAAACAAATAAACAG GAACACCAAATAACGACAAATCCAAGTTTCAAAAATAAGGGGGAAATCTA GATGTGAAGGATGATATTTTCTAGATAAGCCATGGCTCGATGAagctttt gaaaacattttggtTGCCATGCCATTCGATATGTTTGACACCGAGGATGG AACTCATCACTACATCTCCTCTTTCAAAAAGTGTTCTCAATCCAAACCAA TCTTCTTGGTAGAGCTGACGAAAAAATGGAAATTGTTAGGGCCggcctcc acttgcgcgcgctgcgatcgcacttttcggcttcaatcatttttgcttgg aaaaaagattacgtcataaaaatgtagcgcacgctcgaaaaaaaaattga gcacatttcaacttttttgtttgtttttcaatggaattgcttcatttttc ttttgaccaatagtgTGGAAGCTTTGCACAAAtaagtgcgatcgaagcgc gcgcaagtggagaccggtctTTAGGTATCAGAATACTCGAGCGGTGATTG AGAAATGTAAGAGCTGAATAGCTTCCTCATCTACCTtctgatttgatttg aaattggAATAAGGCGAATGAGATGCATGCAGCagtttcttttaaattta aaacaattttaacaGTCGACCCGAATTCAGTAAAATCACCTTGTGTAGGC AATGGGAACATCTAAAAGAAAAGTAATCTTACTTTTTGTTGTTTCATGTC TTGGATTTTGTATTCTTCATCATAAAATCCGTATAAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022226TCONS_00022226Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022226-proteinTCONS_00022226-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:205535..211722 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.04 0.23 0.42 0.21 0.32 0.34 0.55 0.65 0.49 0.17 0.7 3.72 6.06 4.06 1.57 4.05 5.56 11.68 7.44 4.27 3.99 7.01 8.87 9.71 7.56 1.38 2.74 10.96 16