TCONS_00022226 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00022226
Unique Name	TCONS_00022226
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2311

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000408:205535..211722+
coding sequence from alignment at sc0000408:205535..211722+

transcript sequence

>TCONS_00022226 ID=TCONS_00022226|Name=TCONS_00022226|organism=Clytia hemisphaerica|type=transcript|length=2311bp
gatttttttaccgCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaa
agaaaatttttacgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAG
GTTGGCCAGTTGGCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGA
TCTTTCATGTCAATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACA
GCTTTACAGTGTAATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACA
AAACAGTGGTTTTGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAG
GATACGAAACAAAAGATTCTTGATGTTCATCCAGGCACTAATGTTATctt
gttgaaatattttgagaatcTGAGAACCTTGGATCCTTTACCAGGACAAT
TGGACCTGGTCGTTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGAT
GGAATCCATCTACTTTGCCATTCACAAGGTGGTTTGATGTGCTTGGGAGC
AGTGCTGAATTTGAATCATACAATTGACACCTTCATCTCTCTATCCGGTC
CTTTGTTTGGCCAATATGGAGTTCCTGCTGGAGTTTTCGATGAAGTACCA
ATCATGAAACCATTGCTCAATTTGTCCAGAGAACTTGTAAGCATACCAAT
TTATTCTGACCTTTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAG
ATCCACGAGATTCGATGATCGAAGCATATGAATATTATTCTAATTATGTA
CCCGTCATTCTGAACGATCCAAGGTCACGTTATTATAATCAAAAAGATGC
AGCAATtcgcaaagaaaattttcttcgtttgaAGAACCTGGTTTTAGTTG
GAGGACCTGGTGATGAAATCATTACACCTTGGCAATCTGCATTATTCGGT
TTCTATGGGAACGATCCATTCAGCGAAACGATGCTTAATATGACTGAAAC
GAAGATGTACCAAGACGATTGGTTCGGCTTAAAAACACAAAACGACCAAG
GGCGAGTGACGTCATATGTCATCCCTGGAATCGACCATGACTCTTGGCCT
GGCTCCGATTTTGTGCTTAAGTTAGCTGTATATCCTTGGCTGACTTAAGA
GAAGAATCTTTGATGATTGTTTTTTAACTGTAGATAAATTGATgatttat
agttttgatttgtagatatattttttttattgacttggAGTTAATGTTGG
ACCGTTTGATACATGGGGACAGTATTAGGGGCAAGATCAATAGCTGCATA
ATAATttataagtttttgttccttttttgatattttttgcaatTAAGAAT
TTCGTAAATCAAAATCCAATAACAAAACcatacaaaatattttcttagcC
AAAATTTGACAATTCTAATTCTAGCGATTATAAAAAAGCGTACAAAAATC
TCTACGAGTGTTATAGAAAGTTTTACGTTATACGTTACGACAGAGTATAT
TATAAGGTTATATATACGACAATAATAAGCAATGATATGTAAATAACATG
AAATTTTATAGAATATGTTCACAATACAAGCGCCAGACCCATTTTTACAT
CACTACACCAAACAAATAAACAGGAACACCAAATAACGACAAATCCAAGT
TTCAAAAATAAGGGGGAAATCTAGATGTGAAGGATGATATTTTCTAGATA
AGCCATGGCTCGATGAagcttttgaaaacattttggtTGCCATGCCATTC
GATATGTTTGACACCGAGGATGGAACTCATCACTACATCTCCTCTTTCAA
AAAGTGTTCTCAATCCAAACCAATCTTCTTGGTAGAGCTGACGAAAAAAT
GGAAATTGTTAGGGCCggcctccacttgcgcgcgctgcgatcgcactttt
cggcttcaatcatttttgcttggaaaaaagattacgtcataaaaatgtag
cgcacgctcgaaaaaaaaattgagcacatttcaacttttttgtttgtttt
tcaatggaattgcttcatttttcttttgaccaatagtgTGGAAGCTTTGC
ACAAAtaagtgcgatcgaagcgcgcgcaagtggagaccggtctTTAGGTA
TCAGAATACTCGAGCGGTGATTGAGAAATGTAAGAGCTGAATAGCTTCCT
CATCTACCTtctgatttgatttgaaattggAATAAGGCGAATGAGATGCA
TGCAGCagtttcttttaaatttaaaacaattttaacaGTCGACCCGAATT
CAGTAAAATCACCTTGTGTAGGCAATGGGAACATCTAAAAGAAAAGTAAT
CTTACTTTTTGTTGTTTCATGTCTTGGATTTTGTATTCTTCATCATAAAA
TCCGTATAAGC

Run BLAST on NCBI

protein sequence of TCONS_00022226-protein

>TCONS_00022226-protein ID=TCONS_00022226-protein|Name=TCONS_00022226-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
DFFTALMLVDICESLSKENFYETLKRLLILVGKGWPVGIQNSATRIKPLG
SFMSIKMMLQRKLIGLQLYSVMLVIILPWVEAYKTVVLVHGLNCGADSFE
DTKQKILDVHPGTNVILLKYFENLRTLDPLPGQLDLVVSELDKIMKKHPD
GIHLLCHSQGGLMCLGAVLNLNHTIDTFISLSGPLFGQYGVPAGVFDEVP
IMKPLLNLSRELVSIPIYSDLFQGAVSIANYWKDPRDSMIEAYEYYSNYV
PVILNDPRSRYYNQKDAAIRKENFLRLKNLVLVGGPGDEIITPWQSALFG
FYGNDPFSETMLNMTETKMYQDDWFGLKTQNDQGRVTSYVIPGIDHDSWP
GSDFVLKLAVYPWLT

Run BLAST on NCBI

transcript from alignment at sc0000408:205535..211722+

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00022226 ID=TCONS_00022226|Name=TCONS_00022226|organism=Clytia hemisphaerica|type=transcript|length=6188bp|location=Sequence derived from alignment at sc0000408:205535..211722+ (Clytia hemisphaerica)
gatttttttaccgCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaa
agaaaatttttacgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAG
GTTGGCCAGTTGGCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGA
TCTTTCATGTCAATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACA
GCTTTACAGTGTAATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACA
AAACAGTGGTTTTGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAG
GATACGAAACAAAAGATTCTTGATGTTCATCCAGGCACTAATGTTATctt
gttgaaatattttgagaatcTGAGAACCTTGGATCCTTTACCAGGACAAT
TGGACCTGGTCGTTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGAT
GGAATCCATCTACTTTGCCATTCACAAGGTACCAACGCTTAACATTTTCT
ATTTGACTACTTCAATTATTGATGAGAATTTTCCATGTCCAAGTAATCAT
TAAAgtgattttcaaaatcttggaATCGAGATTTAAACCTTCCCGGGTCA
TCTATtccatcaaaattttattgaaattaagGTCTATAGTTggtaaattt
tccaaagtggtcaACGAAACAGGGGTGTTATTTTTTACATTTCACAACAC
TTCAGGTGGTTTGATGTGCTTGGGAGCAGTGCTGAATTTGAATCATACAA
TTGACACCTTCATCTCTCTATCCGGTCCTTTGTTTGGCCAATATGGAGGT
AAAGACATTATTTTGCTACACAATATTCAGATCTCTTAAATCCAATTTTC
GAGGGGAATTAGATTTTCCATAGGCTTttgctcatcctctagcaaaAAAG
GTTTCTTATAGATTCTacataggaagtatatctatagaggtctgcgattc
agactagatttacaaagaataagggagcctatcaaATAATAAAACGTCAA
ATTATAGAGCAGAAACAGCAATTTGACTTCAACATATCTTTTTTAGCATC
CGTTCTCTGAGAAAAGAAATACATATAAGACCCTTTTAGCATTTGTCTAA
AGCTGTCTAAAACATATTTTAAGTCCaatgaaatctttctttttgaatAT
CACGCAATATATGGtatgaaaaaaagaaacgatTTACTATTTATAGTTCC
TGCTGGAGTTTTCGATGAAGTACCAATCATGAAACCATTGCTCAATTTGT
CCAGAGAACTTGTAAGCATGTAAGAAttttattcttcattttgaatttta
acatCGAGGCAAGAAAATGTAGGTTGGTGACATCCACCAATGATTTCGGG
CTCCCTATACTACCTgcagttttgtagaggtctgcgattcagttTAAGTA
AAACTGTTTATACAGTTCACTTTATGTACAGTATCTTCAATTTCCCTGAA
AGATATTGTTTTCGTTTAGTAAAATTTGATATCTTTTTAAATGACCGTCC
TCTGACCTACCttctttgtttaaaaaaaatgtttatctttGAAGGTTTAT
GGCATAAAAAGTATCCGTGGTACGGTacaatgtttgttttttgtagAGTT
TTATGATGATGACCACAATTTTATACATTTTCTTTCTAGACCAATTTATT
CTGACCTTTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAGGtatc
aatttcaatttataaaCTCTCAGTGTTTTTTTCCTGTCTATAACGCATGT
TAGATCCCCCTTCTCTAGACTACTTGCCCCTAAACTTCAGCaaattttct
ctccatctataaaTCATTCTACCTCCACTTTTAAATCTCATAATAGTTTT
ACTAAACACTATGAAACATAAAAACCTTTATTATGCCGATTTTGTTCTTG
GAACAGCACCATCTAATTTCGTTCATCATTGGATATCATCTGAGACAcgg
ttgtttttcatttttcctttaGATCCACGAGATTCGATGATCGAAGCATA
TGAATATTATTCTAATTATGTACCCGTCATTCTGAACGATCCAAGGTCAC
GTTATTATAATCAAAAAGGTACAACCAAAAGTTTGTTAAAAGATTTCTGT
CTGctcgagtgacttagggcaagtctcaaaaaccNCAACCAAAAGTTTGT
TAAAAGTTTTCTCTCTGTCATGCCTTGACTGAAACGATCGTTGTAAATAG
TTAGTATTCTCTAATGTAGATTATTGACTAAACAACAAAGAGCCTGAGCC
TGTCAAAGAGTTGATACAAATCCTTCTTCTCATTCTTTTAGATGCAGCAA
TtcgcaaagaaaattttcttcgtttgaAGAACCTGGTTTTAGTTGGAGGA
CCTGGTGATGAAATCATTACACCTTGGCAATCTGCGTACGTTGACCTCTG
GTTTCTTATGACCTTTACCAGAATGTTGACGATATCTCTtctccccgggg
gggggggcactcgatctgaaaacgaccatacgttcggcccaaaatttggc
ttctaaaatcggacccttacagtgcagtgaatttccatgaaaaatcatac
ccttacagtgcactttttcaaaatttctcgcccgtaagggtgaaaatttt
tgcgattttccaagaaaatgtgaaatttttgcctccaaaattgaccaatt
ttgtgccaattttaccaaaaaattggccttttatcacaatttcctaccct
tacagtgcagttcagtccaattttgtaatttcctacccttacagtgcact
agctgaactatgaaaaaacctacccttaagggccgaacgctcaggcaaat
taaggcctgtccagatttttcaaacttagcttaattttttatcaccgttt
ccacttgtcatagcatatcacttcatacatcgaaagaagcgtattggact
gtagatcactggaattgctgtgccataattaattttttcacccaaaaaaa
gatattaggcaaaaaccaaaaaatgctgacgtcagcaaaacttgtttttT
GAATAACTCCAGTTTGGCCAGGCCAGTATCACAACCCGATTCTACAAAAA
ATGTAGTTCTGTAAATTCTAGAATCTACAAAATGTGTAGATTCTGTATTA
TCAGAAACTACATaatatgtagatttcaaaatctACATAATATGTATATC
AATATGTATATCCTAGAAGATTCTAAtagtgacgtaatgttttaaaaCAG
GCCAAAATCACTCCAGAATCAACCAAATAAGTAGAAGTGTCAACGATTTT
AATTATGTGCGTGCTTGAATTAAATTcaagctccaaccctgaccctaact
gtcTAGATAGTGCGTGCTCGAATtagtttcgagctccaaccctgacccta
tcTGTTTAGATAGTCAATTTCCCGGGATTACGCCATCCACAACCCCAACC
AAAAAGTGACTGAACCGTCCTTAGCGATTCATCCTTTATATACTAAGAAC
GCTAAATAACTCATTGTGGTTTATACAATATAGACCTATATGTGGAGCAA
TACTCCATCTTTTCCGGTTCTACAAAATACGTAGAAATTCTAGAAACTAC
AGAATATGTAGATTCTGTGCTATCAGAAactacatatattgtagatttcA
ACCAATTGACAGAACTACATATATTGTAGAACCGGGTGTGATGATGTGTT
GGTTTGGCTtatggtaaaaacatgaaatttggaccaaagttgcacacaat
taaaaggatcattttgaaaaaaaattttttttgaaattttgctgacgtca
gcactttattgcaaaatttcgtattttgctgatttctgctgacgtcagca
aaatttttaaaaaaaattatgcaaaaatgttcctattattgatatgaaat
ttggaccaaagttgcacacaattaaaaggatcattttgaaaaattttttt
tttgaaattttgctgacgtcagcactttgttgcaaaatttcgtattttgc
tgatttctgctgacgtcagcaaaattttcaaaaaaaattatgcaaaaatg
ttcctattattgatatgcaacttttgtccaaatttcatgtttataccata
agccaaactggagttattcaaaaaacaagttttgctgacgtcagcatttt
ttggtttttgtctaatatctttttttgggtgaaaaaattaattatggcac
agctattccagtgatctacactccaaaaggcttctttcgatgtatgaagt
aATATgatatgacaagtggaaacagtgataaaaaaataaggtaaatttgg
acgtgccttaatttgcctgagcgtctggtaggtcatttaccttgagtgcc
ccccgggCTCTTCTCGTAACCTGTTGGAATGAAAGACATTTTTTCAAAGG
ATGAATTGATTCTGTCGTGACAATAAAATGTCAAGAGAATTCTAAAATAA
GCTTTCcaaagaaatttgatttattggATAACTAGAATATTCTTCTTTCG
TTGCAGATTATTCGGTTTCTATGGGAACGATCCATTCAGCGAAACGATGC
TTAATATGACTGAAACGAAGGTAATAGACTATTATTTAGAATCCATGCCC
TTTTCATGCAAGCCTCAGGGCTCAGGGCAGGGATAATTAATGTGTTAAAA
ACTTAGAATAGAGATTTGAatcattttttctgaaaataattatttcaggC
AACATCTTGGGGCACCCCCTTCCCCTAGGCCCATGCGTAATCGTCAGATA
GGTTATTGTAAAGAAGCCGTAAGTGATTTTTAATTGCTCTAACTAACGGT
CGAAAAGGAGAGTTATACCTATATTTTGACAAGCATCAGATCTCtctaaa
atatgttttgttctCTTTCATTCGATCATAGATGTACCAAGACGATTGGT
TCGGCTTAAAAACACAAAACGACCAAGGGCGAGTGACGTCATATGTCATC
CCTGGAATCGACCATGACTCTTGGCCTGGCTCCGATTTTGTGCTTAAGTT
AGCTGTATATCCTTGGCTGACTTAAGAGAAGAATCTTTGATGATTGTTTT
TTAACTGTAGATAAATTGATgatttatagttttgatttgtagatatattt
tttttattgacttggAGTTAATGTTGGACCGTTTGATACATGGGGACAGT
ATTAGGGGCAAGATCAATAGCTGCATAATAATttataagtttttgttcct
tttttgatattttttgcaatTAAGAATTTCGTAAATCAAAATCCAATAAC
AAAACcatacaaaatattttcttagcCAAAATTTGACAATTCTAATTCTA
GCGATTATAAAAAAGCGTACAAAAATCTCTACGAGTGTTATAGAAAGTTT
TACGTTATACGTTACGACAGAGTATATTATAAGGTTATATATACGACAAT
AATAAGCAATGATATGTAAATAACATGAAATTTTATAGAATATGTTCACA
ATACAAGCGCCAGACCCATTTTTACATCACTACACCAAACAAATAAACAG
GAACACCAAATAACGACAAATCCAAGTTTCAAAAATAAGGGGGAAATCTA
GATGTGAAGGATGATATTTTCTAGATAAGCCATGGCTCGATGAagctttt
gaaaacattttggtTGCCATGCCATTCGATATGTTTGACACCGAGGATGG
AACTCATCACTACATCTCCTCTTTCAAAAAGTGTTCTCAATCCAAACCAA
TCTTCTTGGTAGAGCTGACGAAAAAATGGAAATTGTTAGGGCCggcctcc
acttgcgcgcgctgcgatcgcacttttcggcttcaatcatttttgcttgg
aaaaaagattacgtcataaaaatgtagcgcacgctcgaaaaaaaaattga
gcacatttcaacttttttgtttgtttttcaatggaattgcttcatttttc
ttttgaccaatagtgTGGAAGCTTTGCACAAAtaagtgcgatcgaagcgc
gcgcaagtggagaccggtctTTAGGTATCAGAATACTCGAGCGGTGATTG
AGAAATGTAAGAGCTGAATAGCTTCCTCATCTACCTtctgatttgatttg
aaattggAATAAGGCGAATGAGATGCATGCAGCagtttcttttaaattta
aaacaattttaacaGTCGACCCGAATTCAGTAAAATCACCTTGTGTAGGC
AATGGGAACATCTAAAAGAAAAGTAATCTTACTTTTTGTTGTTTCATGTC
TTGGATTTTGTATTCTTCATCATAAAATCCGTATAAGC

Coding sequence (CDS) from alignment at sc0000408:205535..211722+

>TCONS_00022226 ID=TCONS_00022226|Name=TCONS_00022226|organism=Clytia hemisphaerica|type=CDS|length=8784bp|location=Sequence derived from alignment at sc0000408:205535..211722+ (Clytia hemisphaerica)
gatttttttaccgCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaa
agaaaatttttacgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAG
GTTGGCCAGTTGGCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGA
TCTTTCATGTCAATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACA
GCTTTACAGTGTAATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACA
AAACAGTGGTTTTGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAG
GATACGAAACAAAAGATTCTTGATGTTCATCCAGGCACTAATGTTATctt
gttgaaatattttgagaatcTGAGAACCTTGGATCCTTTACCAGGACAAT
TGGACCTGGTCGTTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGAT
GGAATCCATCTACTTTGCCATTCACAAGGTGGTTTGATGTGCTTGGGAGC
AGTGCTGAATTTGAATCATACAATTGACACCTTCATCTCTCTATCCGGTC
CTTTGTTTGGCCAATATGGAGTTCCTGCTGGAGTTTTCGATGAAGTACCA
ATCATGAAACCATTGCTCAATTTGTCCAGAGAACTTGTAAGCATACCAAT
TTATTCTGACCTTTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAG
ATCCACGAGATTCGATGATCGAAGCATATGAATATTATTCTAATTATGTA
CCCGTCATTCTGAACGATCCAAGGTCACGTTATTATAATCAAAAAGATGC
AGCAATtcgcaaagaaaattttcttcgtttgaAGAACCTGGTTTTAGTTG
GAGGACCTGGTGATGAAATCATTACACCTTGGCAATCTGCATTATTCGGT
TTCTATGGGAACGATCCATTCAGCGAAACGATGCTTAATATGACTGAAAC
GAAGATGTACCAAGACGATTGGTTCGGCTTAAAAACACAAAACGACCAAG
GGCGAGTGACGTCATATGTCATCCCTGGAATCGACCATGACTCTTGGCCT
GGCTCCGATTTTGTGCTTAAGTTAGCTGTATATCCTTGGCTGACTTAAga
tttttttaccgCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaaag
aaaatttttacgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAGGT
TGGCCAGTTGGCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGATC
TTTCATGTCAATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACAGC
TTTACAGTGTAATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACAAA
ACAGTGGTTTTGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAGGA
TACGAAACAAAAGATTCTTGATGTTCATCCAGGCACTAATGTTATcttgt
tgaaatattttgagaatcTGAGAACCTTGGATCCTTTACCAGGACAATTG
GACCTGGTCGTTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGATGG
AATCCATCTACTTTGCCATTCACAAGGTGGTTTGATGTGCTTGGGAGCAG
TGCTGAATTTGAATCATACAATTGACACCTTCATCTCTCTATCCGGTCCT
TTGTTTGGCCAATATGGAGTTCCTGCTGGAGTTTTCGATGAAGTACCAAT
CATGAAACCATTGCTCAATTTGTCCAGAGAACTTGTAAGCATACCAATTT
ATTCTGACCTTTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAGAT
CCACGAGATTCGATGATCGAAGCATATGAATATTATTCTAATTATGTACC
CGTCATTCTGAACGATCCAAGGTCACGTTATTATAATCAAAAAGATGCAG
CAATtcgcaaagaaaattttcttcgtttgaAGAACCTGGTTTTAGTTGGA
GGACCTGGTGATGAAATCATTACACCTTGGCAATCTGCATTATTCGGTTT
CTATGGGAACGATCCATTCAGCGAAACGATGCTTAATATGACTGAAACGA
AGATGTACCAAGACGATTGGTTCGGCTTAAAAACACAAAACGACCAAGGG
CGAGTGACGTCATATGTCATCCCTGGAATCGACCATGACTCTTGGCCTGG
CTCCGATTTTGTGCTTAAGTTAGCTGTATATCCTTGGCTGACTTAAgatt
tttttaccgCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaaagaa
aatttttacgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAGGTTG
GCCAGTTGGCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGATCTT
TCATGTCAATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACAGCTT
TACAGTGTAATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACAAAAC
AGTGGTTTTGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAGGATA
CGAAACAAAAGATTCTTGATGTTCATCCAGGCACTAATGTTATcttgttg
aaatattttgagaatcTGAGAACCTTGGATCCTTTACCAGGACAATTGGA
CCTGGTCGTTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGATGGAA
TCCATCTACTTTGCCATTCACAAGGTGGTTTGATGTGCTTGGGAGCAGTG
CTGAATTTGAATCATACAATTGACACCTTCATCTCTCTATCCGGTCCTTT
GTTTGGCCAATATGGAGTTCCTGCTGGAGTTTTCGATGAAGTACCAATCA
TGAAACCATTGCTCAATTTGTCCAGAGAACTTGTAAGCATACCAATTTAT
TCTGACCTTTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAGATCC
ACGAGATTCGATGATCGAAGCATATGAATATTATTCTAATTATGTACCCG
TCATTCTGAACGATCCAAGGTCACGTTATTATAATCAAAAAGATGCAGCA
ATtcgcaaagaaaattttcttcgtttgaAGAACCTGGTTTTAGTTGGAGG
ACCTGGTGATGAAATCATTACACCTTGGCAATCTGCATTATTCGGTTTCT
ATGGGAACGATCCATTCAGCGAAACGATGCTTAATATGACTGAAACGAAG
ATGTACCAAGACGATTGGTTCGGCTTAAAAACACAAAACGACCAAGGGCG
AGTGACGTCATATGTCATCCCTGGAATCGACCATGACTCTTGGCCTGGCT
CCGATTTTGTGCTTAAGTTAGCTGTATATCCTTGGCTGACTTAAgatttt
tttaccgCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaaagaaaa
tttttacgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAGGTTGGC
CAGTTGGCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGATCTTTC
ATGTCAATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACAGCTTTA
CAGTGTAATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACAAAACAG
TGGTTTTGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAGGATACG
AAACAAAAGATTCTTGATGTTCATCCAGGCACTAATGTTATcttgttgaa
atattttgagaatcTGAGAACCTTGGATCCTTTACCAGGACAATTGGACC
TGGTCGTTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGATGGAATC
CATCTACTTTGCCATTCACAAGGTGGTTTGATGTGCTTGGGAGCAGTGCT
GAATTTGAATCATACAATTGACACCTTCATCTCTCTATCCGGTCCTTTGT
TTGGCCAATATGGAGTTCCTGCTGGAGTTTTCGATGAAGTACCAATCATG
AAACCATTGCTCAATTTGTCCAGAGAACTTGTAAGCATACCAATTTATTC
TGACCTTTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAGATCCAC
GAGATTCGATGATCGAAGCATATGAATATTATTCTAATTATGTACCCGTC
ATTCTGAACGATCCAAGGTCACGTTATTATAATCAAAAAGATGCAGCAAT
tcgcaaagaaaattttcttcgtttgaAGAACCTGGTTTTAGTTGGAGGAC
CTGGTGATGAAATCATTACACCTTGGCAATCTGCATTATTCGGTTTCTAT
GGGAACGATCCATTCAGCGAAACGATGCTTAATATGACTGAAACGAAGAT
GTACCAAGACGATTGGTTCGGCTTAAAAACACAAAACGACCAAGGGCGAG
TGACGTCATATGTCATCCCTGGAATCGACCATGACTCTTGGCCTGGCTCC
GATTTTGTGCTTAAGTTAGCTGTATATCCTTGGCTGACTTAAgatttttt
taccgCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaaagaaaatt
tttacgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAGGTTGGCCA
GTTGGCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGATCTTTCAT
GTCAATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACAGCTTTACA
GTGTAATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACAAAACAGTG
GTTTTGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAGGATACGAA
ACAAAAGATTCTTGATGTTCATCCAGGCACTAATGTTATcttgttgaaat
attttgagaatcTGAGAACCTTGGATCCTTTACCAGGACAATTGGACCTG
GTCGTTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGATGGAATCCA
TCTACTTTGCCATTCACAAGGTGGTTTGATGTGCTTGGGAGCAGTGCTGA
ATTTGAATCATACAATTGACACCTTCATCTCTCTATCCGGTCCTTTGTTT
GGCCAATATGGAGTTCCTGCTGGAGTTTTCGATGAAGTACCAATCATGAA
ACCATTGCTCAATTTGTCCAGAGAACTTGTAAGCATACCAATTTATTCTG
ACCTTTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAGATCCACGA
GATTCGATGATCGAAGCATATGAATATTATTCTAATTATGTACCCGTCAT
TCTGAACGATCCAAGGTCACGTTATTATAATCAAAAAGATGCAGCAATtc
gcaaagaaaattttcttcgtttgaAGAACCTGGTTTTAGTTGGAGGACCT
GGTGATGAAATCATTACACCTTGGCAATCTGCATTATTCGGTTTCTATGG
GAACGATCCATTCAGCGAAACGATGCTTAATATGACTGAAACGAAGATGT
ACCAAGACGATTGGTTCGGCTTAAAAACACAAAACGACCAAGGGCGAGTG
ACGTCATATGTCATCCCTGGAATCGACCATGACTCTTGGCCTGGCTCCGA
TTTTGTGCTTAAGTTAGCTGTATATCCTTGGCTGACTTAAgattttttta
ccgCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaaagaaaatttt
tacgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAGGTTGGCCAGT
TGGCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGATCTTTCATGT
CAATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACAGCTTTACAGT
GTAATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACAAAACAGTGGT
TTTGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAGGATACGAAAC
AAAAGATTCTTGATGTTCATCCAGGCACTAATGTTATcttgttgaaatat
tttgagaatcTGAGAACCTTGGATCCTTTACCAGGACAATTGGACCTGGT
CGTTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGATGGAATCCATC
TACTTTGCCATTCACAAGGTGGTTTGATGTGCTTGGGAGCAGTGCTGAAT
TTGAATCATACAATTGACACCTTCATCTCTCTATCCGGTCCTTTGTTTGG
CCAATATGGAGTTCCTGCTGGAGTTTTCGATGAAGTACCAATCATGAAAC
CATTGCTCAATTTGTCCAGAGAACTTGTAAGCATACCAATTTATTCTGAC
CTTTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAGATCCACGAGA
TTCGATGATCGAAGCATATGAATATTATTCTAATTATGTACCCGTCATTC
TGAACGATCCAAGGTCACGTTATTATAATCAAAAAGATGCAGCAATtcgc
aaagaaaattttcttcgtttgaAGAACCTGGTTTTAGTTGGAGGACCTGG
TGATGAAATCATTACACCTTGGCAATCTGCATTATTCGGTTTCTATGGGA
ACGATCCATTCAGCGAAACGATGCTTAATATGACTGAAACGAAGATGTAC
CAAGACGATTGGTTCGGCTTAAAAACACAAAACGACCAAGGGCGAGTGAC
GTCATATGTCATCCCTGGAATCGACCATGACTCTTGGCCTGGCTCCGATT
TTGTGCTTAAGTTAGCTGTATATCCTTGGCTGACTTAAgatttttttacc
gCACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaaagaaaattttta
cgaGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAGGTTGGCCAGTTG
GCATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGATCTTTCATGTCA
ATAAAGATGATGTTACAGAGAAAGCTGATTGGTTTACAGCTTTACAGTGT
AATGCTGGTCATCATTTTACCATGGGTGGAGGCTTACAAAACAGTGGTTT
TGGTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAGGATACGAAACAA
AAGATTCTTGATGTTCATCCAGGCACTAATGTTATcttgttgaaatattt
tgagaatcTGAGAACCTTGGATCCTTTACCAGGACAATTGGACCTGGTCG
TTTCTGAGCTGGATAAAATCATGAAGAAACACCCAGATGGAATCCATCTA
CTTTGCCATTCACAAGGTGGTTTGATGTGCTTGGGAGCAGTGCTGAATTT
GAATCATACAATTGACACCTTCATCTCTCTATCCGGTCCTTTGTTTGGCC
AATATGGAGTTCCTGCTGGAGTTTTCGATGAAGTACCAATCATGAAACCA
TTGCTCAATTTGTCCAGAGAACTTGTAAGCATACCAATTTATTCTGACCT
TTTCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAGATCCACGAGATT
CGATGATCGAAGCATATGAATATTATTCTAATTATGTACCCGTCATTCTG
AACGATCCAAGGTCACGTTATTATAATCAAAAAGATGCAGCAATtcgcaa
agaaaattttcttcgtttgaAGAACCTGGTTTTAGTTGGAGGACCTGGTG
ATGAAATCATTACACCTTGGCAATCTGCATTATTCGGTTTCTATGGGAAC
GATCCATTCAGCGAAACGATGCTTAATATGACTGAAACGAAGATGTACCA
AGACGATTGGTTCGGCTTAAAAACACAAAACGACCAAGGGCGAGTGACGT
CATATGTCATCCCTGGAATCGACCATGACTCTTGGCCTGGCTCCGATTTT
GTGCTTAAGTTAGCTGTATATCCTTGGCTGACTTAAgatttttttaccgC
ACTGATGTTGGTTGACATTTGTGAGAGTTtgagcaaagaaaatttttacg
aGACATTGAAAAGGTTATTGATTCTTGTTGGAAAAGGTTGGCCAGTTGGC
ATTCAGAATTCCGCCACAAGGATCAAACCTTTGGGATCTTTCATGTCAAT
AAAGATGATGTTACAGAGAAAGCTGATTGGTTTACAGCTTTACAGTGTAA
TGCTGGTCATCATTTTACCATGGGTGGAGGCTTACAAAACAGTGGTTTTG
GTCCATGGCTTAAATTGTGGCGCAGATTCGTTCGAGGATACGAAACAAAA
GATTCTTGATGTTCATCCAGGCACTAATGTTATcttgttgaaatattttg
agaatcTGAGAACCTTGGATCCTTTACCAGGACAATTGGACCTGGTCGTT
TCTGAGCTGGATAAAATCATGAAGAAACACCCAGATGGAATCCATCTACT
TTGCCATTCACAAGGTGGTTTGATGTGCTTGGGAGCAGTGCTGAATTTGA
ATCATACAATTGACACCTTCATCTCTCTATCCGGTCCTTTGTTTGGCCAA
TATGGAGTTCCTGCTGGAGTTTTCGATGAAGTACCAATCATGAAACCATT
GCTCAATTTGTCCAGAGAACTTGTAAGCATACCAATTTATTCTGACCTTT
TCCAAGGTGCAGTCTCCATTGCGAACTATTGGAAAGATCCACGAGATTCG
ATGATCGAAGCATATGAATATTATTCTAATTATGTACCCGTCATTCTGAA
CGATCCAAGGTCACGTTATTATAATCAAAAAGATGCAGCAATtcgcaaag
aaaattttcttcgtttgaAGAACCTGGTTTTAGTTGGAGGACCTGGTGAT
GAAATCATTACACCTTGGCAATCTGCATTATTCGGTTTCTATGGGAACGA
TCCATTCAGCGAAACGATGCTTAATATGACTGAAACGAAGATGTACCAAG
ACGATTGGTTCGGCTTAAAAACACAAAACGACCAAGGGCGAGTGACGTCA
TATGTCATCCCTGGAATCGACCATGACTCTTGGCCTGGCTCCGATTTTGT
GCTTAAGTTAGCTGTATATCCTTGGCTGACTTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_012457	XLOC_012457	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00022226-protein	TCONS_00022226-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000408	supercontig	sc0000408:205535..211722 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.111876	0.0438629	0.232493	0.422995	0.207443	0.318675	0.336089	0.552424	0.649173	0.490719	0.169278	0.704305	3.72233	6.05958	4.05654	1.57337	4.05127	5.5635	11.6767	7.43555	4.26722	3.9904	7.00593	8.86557	9.70809	7.55791	1.38393	2.74206	10.9578	16.0015

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR029058	AB_hydrolase
IPR002472	Palm_thioest

Vocabulary: **Molecular Function**
Term	Definition
GO:0098599	palmitoyl hydrolase activity

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0098599	palmitoyl hydrolase activity

Blast

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BLAST of TCONS_00022226 vs. Swiss-Prot (Human)
Match: PPT2 (Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT2 PE=1 SV=4)

HSP 1 Score: 171.785 bits (434), Expect = 1.609e-47
Identity = 107/286 (37.41%), Postives = 158/286 (55.24%), Query Frame = 1

Query:  244 AYKTVVLVHGLNCGADSFEDTKQKILDVHPGTNVILLKYFENLRTLDPLPGQLDLVVSELDKIMKKHPDGIHLLCHSQGGLMCLGAVLNL--NHTIDTFISLSGPLFGQYGVPAGVFDEVPIMKPLLNLSRELVSIPIYSDLFQGAVSIANYWKDPRDSMIEAYEYYSNYVPVILNDPRSRYYNQKDAAIRKENFLRLKNLVLVGGPGDEIITPWQSALFGFYGNDPFSETMLNMTETKMYQDDWFGLKTQNDQGRVTSYVIPGIDHDSWPGSDFVLKLAVYPWLT 1095
            +YK V++VHGL   + SF    + I + HPGT V +L  F+   +L PL  Q+      +  IM K P G+HL+C+SQGGL+C  A+L++  +H +D+FISLS P  GQYG       +   +K L   S       I    +    SI NYW DP     + Y   S+++ +I N  R    +  +A + ++NFLR+ +LVL+GGP D +ITPWQS+ FGFY  +   ET+L M E  +Y  D FGLKT   +G +    + GI H +W  +  + +  + PWL+
Sbjct:   35 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAKAPQGVHLICYSQGGLVCR-ALLSVMDDHNVDSFISLSSPQMGQYG-------DTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHD--DLYLNASSFLALI-NGER----DHPNATVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDAN---ETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWLS 302

The following BLAST results are available for this feature:

BLAST of TCONS_00022226 vs. Swiss-Prot (Human)

BLAST of TCONS_00022226 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PPT2	1.609e-47	37.41	Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT...	[more]

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TCONS_00022226 (transcript) - C. hemisphaerica