XLOC_012143 (gene) - C. hemisphaerica

Overview
NameXLOC_012143
Unique NameXLOC_012143
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000391:216994..225707-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012143 ID=XLOC_012143|Name=XLOC_012143|organism=Clytia hemisphaerica|type=gene|length=8714bp|location=Sequence derived from alignment at sc0000391:216994..225707- (Clytia hemisphaerica)
CTTCGAAAAAATAAAAGGAAAATAAAGAATCATACCTCTTGCTTTCATCT
ATAATTGCATTCAATTGCAGCAATTTCAATTTTTTTTATCTAACTCTAAA
ATTTATAAAGCATGAAGGCAAATCGTTAACCATGCCCCCCTCCTCTGTAA
ATTTTCCTTCGAAAAAATAAAAGGAAAATAAAGAATCATACCTCTTGCTT
TCATCCACAATCGCATTCAATTGCAGCAATTTCAATAGTTTTATCTAACT
CTAAAATTCATAAAGCATGAAGGCAAATCGTTAACCATACCCCTGCTAAA
GCCTTTCTTGCAAAAAAATTAAAATAACATAAAAAGATTCATACCTCTTG
TTTCCATCCACAACTGCATTCAATTGCAGCAATTTCAATTTTTTTATCTA
GCTCTAAAATTTATAAAGCATGAAGGCAAATCGTTAACCATCCCCCCCCC
TCTGTAAATTTTCCTTCGAAAAAATAAAAGGAAAATAAAGAATCATACCT
CTTACTTTCATCCACAATTGCATTCAATTGCAGCAATTTCAATAGTTTTA
TTTAACTTTAAAATTCATAAAGCATGAAGGCAAATCGTTAACCATACCCC
TTCTAAAGCCCTTCTTGCAAAAAAATAAAATAACATAAAAAGATTCATAC
CTCTTGCTTTCATCCACAACTGCATTCAATTGCAACTATTTCAATTCTTT
TATCTAACTCTAAAATTCATAAAGCATGAAGGCAAATTGTAAACTCCGCC
CCTTATTAAACCTCTCTAGCAGACAAAATTAACGAATAATCTAAAAACAT
ATAAGTCACACTAAAGAAGACTAAGTATAAACATACCAAAAAAATTAAAG
GGAAAGATTCATACCTCTTACAAGCATGTCTATTCCATTCAACTTCCAAC
ATTTCTATGTAGCTCTAAAATTTATAAAGTATGAAGGAAAATCGTAAACC
ATCCCGTTCTGAAACTTCTCTTGCGGGAAAAAGAATGAATAATCCAAAAG
ACAGAATTCATACTAGACGATTAGGTTCAAACAGACAAGAAACATTGAAC
ATGAAATTTAATACCTCTTTATTTTATCACTACTCCATTCAACATTTAAG
ATACTTTCTCCAATTCTTCAGTCATCAAAGCATAAACGCCCCTTTCCGTA
ATCTCCCTTGCAGACAAAAATAATTAATATCAAAAAAATATATAATTTAG
CTCACACTTAAGAAGACAAGGTATAAACAGACCAATATAAGTGGAAAAAA
AAATTCATACCTTTCAGTTGCATCTAATATGACATTCAACATGCATCATT
AATAAAATTTTTATCCAACTCTAAAATATAAAGCATAGAGGCACCATTGT
TATCCATCCCCCCTCATGAAACCTCCCTTACCAACAACAGAAAAAAATCG
CTCAAATAATATGAAACTCACGCTTAAGAATACTAGGTCCAAACATGCCA
TTGATAGTGAAAATAGAGATTCATACCTTTTATTTGCTTCTACCATAACA
TTCAACTTATAACATTTATAATTATTTTTTCTAATTCTAAAATTTATTAA
GTTTAACGGAGAACTGGTAACTACCCCCCCCCCTTCTGCATACTCCCCTT
GCGGCCAAAATAATGAATATTCTAAAAACAAAAGGTTATCAAAGGACTAG
ATACAAACAAAACAAAGAAATTTAACATAAAAAGATTCATACCTCTTAAT
TCTATCCACATTTCCATTCAACTTTTAATTGTTTTATCTAACTCTAAAAT
TCATAAAGCATAAAGGCGAATTGTTATCTAGCCTTCTCGTGAAACTTCCC
TTACTGACATAAAAAACGAACGATCAAATAATACACGACTCAATCTTATA
AAAACTAAAGGAGAATCGGTAACAACCACTCCATATCTGAAATATCTGAA
AAATCTGAAACCACCCTTACAGACAAAAATATCAAGTAATAAAAAGTCAG
ACAGGTCAACGTCGAAAGACGAAATACAAACAGAACAACAAAAATTGAAC
ATAAAGAATCATACCTCTTACTTCCACCATTGCATTCAACTTGGAAAATT
TTTAATCGTTTTATCTAACTCTAAAAATCATAAAGCATGAAGGCGAATTG
TTATCTTGTCCTCTCCTGAAACTATCCGTACCGACATATAGAATGAATAG
TCAAACAAATACACGACTCAATCTTAAGAAAACTAAAGGAGAATCGGTAA
AACCAATCCATATCTGAAATATCTGAAAAATCTGAAACCACCCTAACAGA
CAAAAATAACAAGTAATAAAAAGTAAGACAGGCCAACGTCAAATGACGAG
ATACAAAAAGAAGAAACAAATTGAATATAAACAATCATACCTCTTACTTC
TATCCACATTTCCATTCAACTTTTCATTGTTTTATCTAACTCTAAAATTC
ATAAAGCATGAAAGTGAATTGTTATCTTGTCCCCTCCTGAAACTATCCGT
ACCGATGAAACCTCAAAAGACAAGATACAAACAGAACAACAAAAATTAAA
CATAAAGAATCATACCTCTTACTTCCACAATTGCATTCAACTTGAGACAT
TCCTAATAGTTTTATGAAACTCTAAAATTCATAAAAAATAAAAATAAATC
GTTAACTATCCCCTTTCTAAAATCTATCTTGTGGAATAAAAGAATGGATA
CTCAAAATCAAATAACATAGCAGTCAAGCTTGACGACAAAGTACAAACAA
ATCATAAGCAATTGAAATAAAATTTCATACCTCTTATTTGAATTCACCAA
TCCACTCAAATTGCAACATTTATGATATTATATTTTATCTAACTCTAAAA
TTAATATAGCATGAAAATAAATCGTTAACTACCCCCTCTCAAACATCCCA
TGCAAAAAAATAACGAATGAATAATCTAAATAATAGAAACATCATAGTCC
CACTTGACGACAAAGTACGAACAGACAATAAGTATTTAAAGTAAAATTTC
ATACCTATTAGCTGCATTCAAAAACTCCACTCAAGTTGCAACATTTATAA
TATTTTATCTAACTCTAAAATTGATATAGCATGAAAATAAATCGTTAAAT
ACCCCCTCTCAAACCTCCCATGCAAAAAATAAAGAATGAATAATCAAAAA
TAAAAACACGTAGTAGTCACGCTTGACGACAAGGTACAAACAGACCAAAA
GCATTTGAAATAAAATTTCTTACCTCTTAGTTGCATTCAAACACTCCACT
CAAGTTGCAACATTTATAATATTTTAACTAACTCTAAAATTAATATAGCA
TGAAAATAAATCGTTCAATACCCCCTCTCAAACCTCCCATGCAAAAAATA
AAGAATGAATAATCAAAAATAAAAACACGTAGTAGTCACGCTTGACGACA
AGGTACAAACAGACAATAAGCATTTAAAGTAAAATTTCATACCTCTTAGC
TGCATTCAAACACTACACTCAAGTTGCAACATTTATAATATTTTAACTAA
CTCTAAAATTAATATAGCATGAAAATAAATCGTTAACTACCCCCTCTCAA
ACCTCCAATGCAAAATAAAGAATGAATAATCAAAAATAAAAACACGTAGT
AGTCACGCTTGATGACAAGGTACAAACAGACCAAAAACATTTGAAATAAA
ATGTCTTACCTATTAGTTAGCATTCAAACACTCTACCTATTAGTTAGCAT
TCAAACACTCCACTCAAGTTGCAACATTTATAATATTTTAACTAACTCTA
AAATTAATATAGCATGAAAATAAATCGTTAACTACCTCCCCACTCAAACC
TCCAATGCAAAATAAAGAATGAATAATCAAAAATAAAAACACGTAGTGGT
CACGCTTGATGACAAGGTACAAACAGACAATAAGCATTTAAAGTAAAATT
TCATACCTATTAGCTGCATTCAAACACTCCACTCAAGTAGCAACATTTAT
AATATTTTATCTAACTCTAAAATTAATATAGCATGAAAATAAATCGTTAA
CTACCTCCCCTCTCAAACCTCCGATGCAAAATAAAGAATGAATAATCAAA
AATAAAAACACGTAGTAGTCACGCTTAATGACAAGGTACAAACAGACAAT
AAGCATTTAAAGTAAAATTTCATACCTATTAGCTGCATTCAAACACTCCA
CTCAAGTTGCAACATTTATAATATTTTATCTAACTCTAAAATTAATATAG
AATGAAAATAAATCGTTAACTACCTCCCCTCTCAAACCTCCAATGCAAAA
TAAAGAATGAATAATCAAAAATAAAAACACGTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTGCATTCAAACACTCCACTCAAGTTGCAACATTTATA
ATATTTTATCTAACTCTAAAATTAATATAGAATGAAAATAAATCGTTAAC
TACCTCCCCACTCAAACCTCCGATGCAAAATAAAGAATGAATAATCAAAA
ATAAAAACACGTAGTAGTCACGCTTGATGACAAGGTACAAACAGACCAAA
AGCTTTTAAAGTAAAATTTCATACCTCTTAGTTGCATTCAAACACTACAC
TCAAGTTGCAACATTTATAATATTTTATCTAACTCTAAAATTATAATAGA
ATGAAAATAAATCGTTAAATACCTCCCCTCTCAAACCTCCAATGCAAAAT
AAAGAATGAATAATCAAAAATAAAAACACGTAGTAGTCACGCTTGATGAC
AAGGTACAAACAGACCAAAAGCATTTGAAATAAAATGTCTTACCTATTAG
TTGCATTCAAACACTCCACTCAAGTTGCAACATTTATAATATTTTATCCA
TAATTCTAAAGTCAATAAACCATAAACACCCCCTTCCGTATCTCCCTTTC
AGACGAATAAAACGAACATAAAAATGTATATACCTCAACACACACTTAAC
AAGAATATGTATAAACAGACAAAAAATAGTAAAAATAAAAATTCATACCT
TTCAGTTGCATCTAACATGCAATTCAACATGCACCATTTAAAAAAATTTT
CATCCAACTCTAAAATTCATAAAGCATAAGGCAAATTGTTATCCATCCCC
CTCCTGAAACCTTACTTACCGACATAAAAACAAACGATCAAATAATATTA
AACTCACCCTCAAAAAGACTAGGTCCAAACATACCATAGATAATGAAAAT
AAAGACTCATACCTTTTATTTGCATCTACCATATCATTCAACTTATATAG
CATTCATAATATTTTCTCTAAGTCTAAAATTAATAAAGTTTGAAAGCAAA
TCGGTAACCATCCCCCCCCCCTCTGCAACCTCCCTTGCAGACAAAATAAT
GAATCTTCTGAAAAAGACATCAAGACTAGATCCAAACAAAACAAAGAAAT
TGAACATAAAAAGAATCATACCTCTTACTTCTATCCACATTTCCATTCAA
CTTTTAATTGTTTTATTTTATCTAACTCTAAAATTCATAAATCATGAAAG
CGAATTGTTATCTAGCCCCCTCGTGAAACCTCCCTTACCGACATATAGAA
TGAATAGTCAAACAAATACACGACTCAATCTTAAGAAAACTAAAGGAGAA
TCGGTAAAACCAATCCATATCTGAAACATCTGAGACCACCCTTACAGACA
AAAATAATAGGTAATAAAAAGTCAGATAGGTCAACGTAAAAAGACGAGAT
ACAAAGAAACAACAAAAATTGAACATAAAGAACCATACCTCTTACTTCCA
CCATTGCATTCAACTTGAGACATTCTTGAAATAAAATTGCATACCTTTTA
GTTGAATTCATCACTGCACTCAAGTTGCAACATTATATTTTATCTAACTT
TAAAATCAATATAGCATGAAAATAAATCGTTAACTACCCCCTCTCAAACC
TCCAATGCAAAATAAAGAATGAATAATCAAAAATAAAAACACGTAGTAGT
CACGCTTGACGACAATGTACAAACAGACCAAAAACATTTGAAATAAAATT
TCTTACCTCTTAGTTGTATTCAAACACTCCACTCAAGTTGCAACATTTAC
AATATTTTATCTAACTCTAAAATTAATATAGAATGAAAATAAATCGTTAA
CTACCTCCCCTCTCAAACCTCCAATGCAAAATAAAGAATGAATAATCAAA
AATAAAAACACGCAGTAGTCACGCTTGACGACAAGGTAAAAAAAATACCA
TAAGCATTTGAAATAAAATTTCATACCTCTTAGTTACATTCACCACTCCA
CTCAATTTGCAACATTTATCATATTTTATCCATAATTCTAAAGTCAATAA
ACCATAAACACCCCCTTCCGTATCTCCCTTTCAGACGAATAAAACGAACA
TAAAAATATGAATACCTCAACTGACACTGAACAAGAATAGGTATAAACAG
ACAAAAAATAGTAAAAATAAAAATTCATACCTTTCAGTTGCATCTAACAT
GCCATTCAACATGCACCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNACTCTAAAATTCATAAAGCATGAAAGCGAATTGTTATCTAATC
CCCTCCTAAAACTACCCTTACCGACATGTAGAATGAATAGTCAAACAAGT
ACACGACTCAATCTTAAGAAAACTAAAGGAGAATCGGTAACAACCAATCC
ATATCTGAAACATCTGAAACCACCCTTACAGACAAAAATAATAGGTAATA
AAAAGTCAGACAGGTCAACGTCAAAAGACGAGATACAAACAAAACAACAA
AAATTGAACATAAAGAACCATACCTCTTACTTCCACCATTGCATTCAACT
TAAGACATTCCTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021654TCONS_00021654Clytia hemisphaericatranscript
TCONS_00021653TCONS_00021653Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000391supercontigsc0000391:216994..225707 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.02	0	0.08	0.01	0	0.06	0.03	0.02	0.02	0.01	0.03	0.1	0	0	0	0	0	0	0	0	0	0	0.21	0.3	0	0	0	0