XLOC_008941 (gene) - C. hemisphaerica

Overview
NameXLOC_008941
Unique NameXLOC_008941
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000224:366150..374759-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008941 ID=XLOC_008941|Name=XLOC_008941|organism=Clytia hemisphaerica|type=gene|length=8610bp|location=Sequence derived from alignment at sc0000224:366150..374759- (Clytia hemisphaerica)
AAGTACCCCTTTTTTAACCTGACTGAAATTCGAGCCGTTACTAGCAACCC TGCGGGGCCCAAGGCGCCGAGTATGCACCCGGCACTGTGACAAGCCGTTA CTAGCAACCCTGCGGGGCCCAAGGCGCCGAGTATGCACCCGGCACAGTGA CAAGCCGTTACTAGCAACCCTGACCCTAACCCCTAACTGATAATAATCGA ATCCTGACCCCCGGAAAATTACCACGGACTAGAAAGAACGAAAAAAATTG AAGGGGCGGAATTGCTGATTGAAACTAGTTTTCACCTGCACAAAACGCGC GATTCTACTGGATTCTAAGAAGATTGATTCGCATTTCTCGTCGACCACGC TTTTGTGAAGAAGTTTATTATATACCTTGATTGTGATTGTTGAGACCGCT CATTTTGTTTAAAGTTTACAACATCTCTTATCTGATTTGGACTCTAGGAA AGTTTAATTTTCAATAGGTTCTAAAATCAAAGATCATCATGAAGATTGAG GAAGTCAAAAGCACAACAAAAACTCAAAGAATCGCAACTCACAGTCATGT CAAAGGTTTAGGATTGAATGAAGATGGAACTGCCTCAGCTGTCGGATCTG GACTGGTTGGTCAGGAAAATGCAAGAGAGGTAAATAATTCATAGTTCAAA CTTTTAGTGGAAGTAGTAGAATTTTTTATCTAATCAAAACGTGTTAATTG AATGAATCAAACGCCGAGAATCAATACACTTTTCCCACTAATGCGCTCGC ATTACTTTGATACTCTCCACAGTTTGGTCTCTGGAGGTAAACAAACCTGT TTTTGATTGTGTTTCCTTAGGAAAAGTCGTTTTTTGAGCTTTTCGTAAGT TCTGTAGATCAAAGTCCCCTCAAATTTTAGTATGTTCAATCTATTCATGT CATGATATTATAACCACCCTGAATTTTTTTTTGCCAAAGGAAGATCGCTA TCAAAAGTTAGAAGCTGAAAACCCACTTTCCCCAGTCAGGACCTCATTTC ACTTTATCGATATTACGCAAACGGCAGTGTGCGCTAAATAATCTTGGTTT CGCTTTCGATTTCAAGCAAAGGTCTTACCAACAGGGCGCGCGTACATAGA AACGGGGCTGGGTAGAAAAATCTAAACATAGAATTCAAAAAAAATACCGA TCATCGTATAGAGCACTAAAAAATACCCCCTTTCTATGTTTAGTTTGTTC AACCTTGGATTATAACTGAAAATATCTTCAAAAAAACCTTCGTCCGCTAT CAGCCGCGCGGTAATCTTTGCCTGCTTCAATTCTTAGATAATGAATAAGA GAGGTGCGCTTAGCTAAGCCGTGCTCGCGGGCGATAAATTTATGTTTACT TATCTTGTATATTTTAGTGGTATTTATCCAATGAAAAGGATGTTGACAAA ATATGCACGGGGCTGACAAGATATGCACGGCATTGATTATGACATCATTA AATATGTCGATGTCGATTCAACGCCCGTTAAAGAAAATAATTCGTAGATA GTTCCTTTTATCTTGAAATTTAGAAATACGAACAAAAAAAGATCAAATTT AATATTTGTTTCCTATCTAGATTATATTAGCTTTAGAATACGGTAAATTT TCACGAAAAATATTTCGCGATGGCGGTACGCCCAATCGCGCCCACGGGAA AGTTCCAATTTTTAATTATCGGGAAATCGGGGAAACCCGTTCACCACGTG GATAAAAAACGTACGGAATGAAACCTGACAGAAGGTTTCAACCAGATTCA TTCAGATAAAGCTATAAGAGGTTCATTACTTGGGGATTTTAAAACCTACA TAACCAAAAACGAAAGTTGTTGGGAAGGAAAGAGTAAACGCAAGACAAGG TTTGGTTGTGTTGATCAGGTTTGTTTTTATTCTATCGGAACTAATGTTAA AAAAGACCAAAGAGGTCCTGACTGACTTTCCCTAACCCCTCGCAGGCAAA AACGCGTTAGTTTTACTTCCCAAACAATTTCATACACAAGGTGGATTTTC CCAGGCCACATTCATTTCTGAGAAGTTGGAATTACGGGAAAGGTGTATTG AACCAGGGGGGGGGTCTTGCAGTTACTCCTTGACACTATGTGGAGTAACT GCAATTTTGGACATTTTCTACAGACACCACCACCCTTTCAGTTATTCCAT AGTGTACTAACTGATTTTACCCTCAAAATTGGTGTATACCACCCCCATAT ATAAATGCCAAATTTGGCAATTTTTTCACTGAATTCCTCATTTTTGATAC CATTTTACTGGGTACGTCTTATTAACGACCGTTCAAGAGTTAAATATCTC AATCATTTTCCAAGTTTGTTAAAATATCTTCCATGCCTTGATTGAAGAAA AATTTTATGATTTTTTTTTACTTTTGTAAAAAATGTTTTGAATTTTTTTG TTTCCGGAATTTTTAAAAGCCTAAAATTTTAAGTGAAAAATTGAAAAAGT TGCTCACTTAGTACACCATATCCTACCAAAATCCACAATTTTGGGCTTAG GCACCACCCATCTTGCAGTTAGTCCACTGGTGGAGTAATTGTTTTCCCAA ATTTTGGTTTATATATATACCACCACGGTAGTAATTGTCATAGTGTTTAT ATAATAACTGCATAACCCCCCCTGATTGAACACAAACGGACGTAATCAAA AAATTGCGATTCAATTGTCGAATACAATGGGCGGTTCCAGTTATAGTCCG TTACCATCTGTGGACGACATGGATTTCCGTTACAATACACCGTTTAACAG TCTTGCCATCTCCACCGTAGAGGCGGTTGGTAAAAATTCTCACTTTTAGT AATGTGGAAGGTTAGAGAAATGTAAACATTGCCATTTGTTTTCTTTCCTT TAAAAAGAATGTTTTAGATGTTTGAACATGATATTAATGACAATTTTATG TATCTCTCCTGAAAATTTCACAAAAATTCATCTAGAGGAAAAGAAGTTAT GATTAAAAGTGAGCTCTTTACCTACCATTTCTCTGCTGGGTTTTCTTATG ACAACTGGATGTTTAACTACCATTCCTGTGGTTGCCAAAATCAAAACAAT GGAAAATTGTTCATACGCGTGCGCAGTCGACACTGTTAAACGGTGTATTT ACTTTTGAAAAACTTCAGGATTTCCGTAACATTCAAGAATTTTTAAGGAA AAATCTTGGATTTTCCAAAGCTTAGCAAGAAAATAAAGCAAATGTTATGG ATTTTCTGATACGGATGACCAAATAATAGTTGTTTTGGAGAACACGGTGG CTTATTGAATAACAAACCAGAATACCCGCGATAGAATTAATGACAGAGAA CATTGACAACTTGGGAATTCTAGGCCCCTTGAGATTTCGGCCCTAAATTG GTTTAAACCTATAGACCCTAAATTACGGTAAGCAGTGGCCTAAAGGGTCC GCGTTGAAAGGGTGCGGATGGATAGCAGAAAGCACAGTGCAATCAAAAAG AGAATCAAACATTAATCGAACCTATCAAACATTGATCGAACCTATCGAAC CTTGATTGAACCTATCAAAAATCAATTGAATCACGATGGAACATCAATCG AACAGTAATCAAACTTTGCCAAAATTTCTTGGTTCAATTTGGTTCGGTAA TTGCAGGGGGGGTCAAGGTCCAGGATACCAACCCAGGGCCCAAAAACCTG ACTTTTAGTAGACACCACCACCCCCCTATATTGGTATCAATACCAACTTG AAAACCCCAATTTTCTAAAAAAGGGGGGGACCCACCCCCCTAAATTGGTA TCGATACCAACATGAAAATCCTGATATTCTGAAAAAGGGGGAGCCACCCC CCCCCTAAATTGGTATCGATACGAACTTGAAAATCCCGATTTTTCTGAAA AAGGGGACCCACCCTAAATTGGCAATCAGTAAAAATGCAAGAAGTTATAT GCATAGGATACTGCATACAAGGGACGCTAAACAAAATCTTTGGATGTTTT TATTCAAAGAACATTCCTCTTATTAATCACTTATATTACAGTATATACCA CACTTTAGACTCCAAGAAAATGAAAACAAGTTTTTCTTATTCTAACACAA CGTAAATTAAGTTTCTTGAACTAAATTGGCAAAATGTATCAAATTCATAA AACTAGTTGATAAACTAGACTAGATAAAAAACTCATTGTATTAGGCACGC CTAGAGTCTTTGATGAACGTTATGTACAGAAAAATTTTATCACGACTAAA AAAGTTCTAAGATCTGCTAAGACTTGACTCAGTTTGTTCAACTCTAGTTT TGAATGAATTTTGGTTGATTGAAAGGATTGAGAGCAGCAAAAGTTAAATA AAAATTTAATTTCAATTATAGAATGAAGAAAGCTTTTATATAGAATCAGG GTATAGTCTAAACGATTCAAATAAGTTTTTATACTTACATTATACCGGGT GCCTCAGAAAAATCTTTGGATGTTTGGCGANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNAACACGTAATAAAAGGGTATTAAATTAAGC ATTTTTAAGCGTTTTCGATAAGAATTTTTTTCAAATATTTCTAAAAACTG ACTATTTACTAAAAACTGACGATGTATTAAACGAAAACTGCTTTTAAAAG TATTTTAACAATTAATTATGTCGTAAAAGTCGTTAAATAAGTCAAATACT GAGCTATTTTTTCATTATTTGCATAAATTTAATACACCTTTTTTTACGTA TTTTTTACACTTTTCGAAAAGTGAATTTTGACTTCAAAAGCTTATAACTT GACAACTACTTGACCAAACTTAAAAAGTTACACCGCAAAATTTAAGTTAG CATGTCCTCTTTCTAATAAAAGTGGTTTTGAGTCTAAACAAGACTTTGTT CGGCCTCAGTGGCTCGCCAAACGTCCAAAGTTTTTTCTGAGGCACCCGGT ACAACATTTTAAGTCAGATACCAATTTCAAATTCAGCAAAAATTAAAAAA GGGGGACCCACCCCCTCATTTTGGTATCGATACCAACTTGACTTTTTGAA ATTTGAAAAAAAAATTTGACACCACCCCCCGGCCCTGGGTTTGGTATCTG GATCCTGACCCCAATCGAATACTTATCGTTCGATTAAGTTTGATTAAGTT CAATTAGTTCGGTAATCAAACAGTTCGATTGATATCGCCTGGTTTGATTT TAGCAACCGTGGGAAACTTCACTCTCCCCCGTAAAAAAAATTTTCTGATC CCCCTTCTTCAACTTTTCGGAAGTTGTCATCCCCCCTTAAGAAAGGGAGG TGGACGAACTATGATTGTGGAGATAGCGAGACTCCTAAACAGTGTATTAC TCCACATACATTACTTTTCCTCAGCGAATGAAAAGGTGATAAATTATCTT GTCTCTAGGTAACTGTTGTGGAGTAATTCAGTTATTCAATAGGCCGTCGT GTTCTCCAAAACAACTATTCAAGATATGATTAATTGAACTTCGAAACGTT CGAAATTGAATCGAACCTAAGTTTGGTTTTCAAACTCTAATCGAATACTC ACAAATTCTTTAAAATATACAGTTCAATTAAAGAAATCAAACTTAATCGA ACTTTGACAAAAACCGTTCTCTACTGCTCTAGGTTCCAGTGAGCCGGGCG CTAAAAACAATCGGCTATCTAAATTTTGATTGATCCTTGAAGAGAGATTA CGTAATCGGCGTTAAATTTTCTCCGCCTAAAAGTGGAAAATGAAGGCCAT TATTTTCAGAGTGCTCTCTGCAATCTTATCTAATGAAGTATAGGCCAGAA TGGGTCAAGGGCTAGAAGAAAATCTTAAAACTTTCTTATGCTAATATGTA CTTATGCACTCGCTCTTATCTGATTTTCTGATGTCCACGCTTATTAAGAT CCAAAGGAGTTGGCCAATTTGATTTAAAATTGTAATCAAACTTAACTTCG AACATAATCGTAATCAAACATAATCCAAGCTCATTGACAATAAATGTAAT TGACAATAAATTGAATCGATCAAACGTTATTCGAATGCAATTGAACATAA CCAGAATATTACCCAGGAATCGGTCGTTCGATTGAGATTCGATTACATTT GACAATCAAATTGCAATTATCAGCTTGGGAAATGCCGTGTGTTTCCATTT CAAGAAATGATGCTCAAGTCAAAGGATTCTTTGAAAAAATAACGCTCACA TCAAATTCCTGCTTTCGTTTGATAACTAAAGATGAGAAAAAATTTAACCC TCAAAACTAACAATTAAAACAAATAAAGTTATATAACTTGACTCAAGTTT CCACTTTACCTAGAGTAAGATTTAATATTGAAAACTAGTATTTTTCAAAA TTTCTTTTTTATCAGGCATGTGGTGTTATAGTGGAGCTGATCAAAGCAAA GAAGATGGCAGGCAGAGCTATTTTACTTGCTGGACCACCTGGGACAGGTA TTAATCATTTCTTTCCTGATTTTATTTCTTGATTTTAATCTTTTATTAAT AAACACTCTCAGGCTGGACTGAAAATGGAGAAATTTTGGTTTGTCGTCTT AAGATAGAAGCTTGAGATCGACATAATAAAGGTTATGATTTGAAGAAAAG AAATTCTTATTTAAAATGGCAATACATTTTTTATTAGTCCAGCTTTAACC TAGGAAAAAACAAAAAATGATAAGATGATGCTCAAATACCCTATTTTAAA AGGAAAAATATAGTGTGATTTGAGAGAAAGCCTCTAACATTATTCAAAGG GAACAACATGCCTTATCTGAGTATTTCTTATGAATTTGTTTTGATATAAA AACTTCTTTTTTCCTTCTAAAAAGGCAAAACTGCTTTGGCACTTGCTATT GCTCAGGAACTGGGACCAAAAGTTCCTTTCTGCCCCATGGTTGGCAGTGA GGTTTATTCTACTGAAGTCAAGAAAACTGAAGTGCTGATGGAGAACTTCA GAAGAGCCATTGGATTGAGAATCAAGGAAACCAAGGAGGTATATGAAGGA GAAGTCACAGAGTTGACTCCATTTGAAACAGAGAATCCAGTTGGGGGTTA TGGAAAGAGTGTCAGTCACATTATTATCGGTTTGAAAACTGCAAAAGGTA CCAAACAGTTAAAACTGGATCCTTCCATTTACGAGAGTTTACAGAAAGAA AAGGTCGAACCGGGAGATGTTATTTACATTGAAGCTAACAGTGGAGCTGT GAGACGCCAAGGTCGCTCGGATGCTTTTGCTACTGAATTTGACTTAGAAG CTGAGGAATATGTCCCTTTACCAAAGGGCGATGTCCACAAGAAGAAAGAG GTTGTCCAGGATGTCACCCTGCATGATTTGGATATTGCCAACGCTAGACC CCAAGGTGGACAGGACATAATGTCTATGATGGGTCAGCTGATGAAGCCAA AGAAAACTGAGATCACTGATAAACTACGGAAAGAAATAAACAAGGTGGTC AACAAATATATTGACCAAGGTGTAGCTGAGTTGGTTCCTGGTGTTTTGTT TATTGATGAAGTTCACATGTTAGATATTGAGTGTTTCACATACCTACATA AAGCTTTAGAATCCTCTTTATCACCTATTGTCATATTCGCAACCAACAGA GGTCATTGCCTTATTAGGGGCACTGATCTACGGTCTCCACACGGTATGCC TTTGGATTTGCTAGATCGTGTTATGATTATCCGTACTATGCCTTATTCCC AAAAAGAAATGATGCAAATCATCAAAATCAGATGCCAGACAGAAGGAATC CAAGTTGACGATGAATCCTTAAAAGAGCTTGGCGATATCGGTACCAAAAC CACACTCCGGTATGCAGTCCAATGTCTAACACCTGCCTCTGTGTTGGCCA AAATCAATGGTCAAGAGAGCGTCACCGTAAATGAGATTCAAGAAGTCAAT GAACTTTTCTTTGACGCGAAAGCTTCTGCGAAACTATTAGCTGAACAGGA AAGCAAGTACATGAAATAACGTTTGTTTCTGCATTGGGAACCTTATTGCT GGAGGTGGTTAAGTGTGTTTTTGGGGCTTCGATTCTTGACCAACAAATCT TATTTTGACATGACAGTGAAAAGGGCTTTTCTAAAGTCACAGAATGAACA TAAAATGATACTATGGTAGTGTAAATATTTTTTAAGATTTATATTTTTCA TTTATTTCCCATTAGTTTTTTTATCTGTTGAAATATTTAGAGGTTTCGAA AATTGTTATAGTACGTGAAAATGGATATGATGGATATGAATAAACATCTT GTGTAGCGTTTTCAGGTCTGTATTATTTGAACTTAGTTGAATGACCTTCA GTCTTGCTATATTCACATGATAATATTTTGATGTTTATTCTAAATCGAAC ATCATAAGGATCGTTTATACGCAAGTGCTGTAAAGATGATGACTTGATTT TAATGGTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016014TCONS_00016014Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016014-proteinTCONS_00016014-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000224supercontigsc0000224:366150..374759 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RUVBL1ruvB-like 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
115.77 111.04 76.82 66.4 118.09 91.05 61.54 69.97 44.74 47.77 37.94 29.16 25.7 26.29 31.21 36.12 65 50.18 12.34 15.64 42.84 41.73 90.89 77.66 73.78 79.27 27.41 19.88 58.58 67