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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016014 ID=TCONS_00016014|Name=TCONS_00016014|organism=Clytia hemisphaerica|type=transcript|length=2297bp
aagtaccccttttttaacctgactgaaattcgagccgttactagcaaccc
tgcggggcccaaggcgccgagtatgcacccggcactgtgacaagccgtta
ctagcaaccctgcggggcccaaggcgccgagtatgcacccggcacagtga
caagccgttactagcaaccctgaccctaacccCTAACTGATAATAATCGA
ATCCTgacccccggaaaattaccacggactagaaagaacgaaaaaaattg
aaggggcggaattgctgattgaaactagttttcaccTGCACAAAACGCGC
GATTCTACTGGATTCTAAGAAGATTGATTCGCATTTCTCGTCGACCACGC
TTTTGTGAAGAAGTTTATTATATACCTTGATTGTGATTGTTGAGACCGCT
CATTTTGTTTAAAGTTTACAACATCTCTTATCTGATTTGGACTCTAGGAA
AGTTTAATTTTCAATAGGTTCTAAAATCAAAGATCATCATGAAGATTGAG
GAAGTCAAAAGCACAACAAAAACTCAAAGAATCGCAACTCACAGTCATGT
CAAAGGTTTAGGATTGAATGAAGATGGAACTGCCTCAGCTGTCGGATCTG
GACTGGTTGGTCAGGAAAATGCAAGAGAGgCATGTGGTGTTATAGTGGAG
CTGATCAAAGCAAAGAAGATGGCAGGCAGAGCTATTTTACTTGCTGGACC
ACCTGGGACAGGCAAAACTGCTTTGGCACTTGCTATTGCTCAGGAACTGG
GACCAAAAGTTCCTTTCTGCCCCATGGTTGGCAGTGAGGTTTATTCTACT
GAAGTCAAGAAAACTGAAGTGCTGATGGAGAACTTCAGAAGAGCCATTGG
ATTGAGAATCAAGGAAACCAAGGAGGTATATGAAGGAGAAGTCACAGAGT
TGACTCCATTTGAAACAGAGAATCCAGTTGGGGGTTATGGAAAGAGTGTC
AGTCACATTATTATCGGTTTGAAAACTGCAAAAGGTACCAAACAGTTAAA
ACTGGATCCTTCCATTTACGAgagtttacagaaagaaaaggTCGAACCGG
GAGATGTTATTTACATTGAAGCTAACAGTGGAGCTGTGAGACGCCAAGGT
CGCTCGGATGCTTTTGCTACTGAATTTGACTTAGAAGCTGAGGAATATGT
CCCTTTACCAAAGGGCGATGTCCACAAGAAGAAAGAGGTTGTCCAGGATG
TCACCCTGCATGATTTGGATATTGCCAACGCTAGACCCCAAGGTGGACAG
GACATAATGTCTATGATGGGTCAGCTGATGAAGCCAAAGAAAACTGAGAT
CACTGATAAACTACGGAAAGAAATAAACAAGGTGGTCAACAAATATATTG
ACCAAGGTGTAGCTGAGTTGGTTCCTGGTGTTTTGTTTATTGATGAAGTT
CACATGTTAGATATTGAGTGTTTCACATACCTACATAAAGCTTTAGAATC
CTCTTTATCACCTATTGTCATATTCGCAACCAACAGAGGTCATTGCCTTA
TTAGGGGCACTGATCTACGGTCTCCACACGGTATGCCTTTGGATTTGCTA
GATCGTGTTATGATTATCCGTACTATGCCTTATTCCCAAAAAGAAATGAT
GCAAATCATCAAAATCAGATGCCAGACAGAAGGAATCCAAGTTGACGATG
AATCCTTAAAAGAGCTTGGCGATATCGGTACCAAAACCACACTCCGGTAT
GCAGTCCAATGTCTAACACCTGCCTCTGTGTTGGCCAAAATCAATGGTCA
AGAGAGCGTCACCGTAAATGAGATTCAAGAAGTCAATGAACTTTTCTTTG
ACGCGAAAGCTTCTGCGAAACTATTAGCTGAACAGGAAAGCAAGTACATG
AAATAACGTTTGTTTCTGCATTGGGAACCTTATTGCTGGAGGTGGTTAAG
TGTGTTTTTGGGGCTTCGATTCTTGACcaacaaatcttattttgacaTGA
CAGTGAAAAGGGCTTTTCTAAAGTCACAGAATGAACATAAAATGATACTA
TGGTagtgtaaatattttttaagatttatatttttcatttatttcccATT
AGTTTTTTTATCTGTTGAAATATTTAGAGGTTTCGAAAATTGTTATAGTA
CGTGAAAATGGATATGATGGATATGAATAAACATCTTGTGTAGCGTTTTC
AGGTCTGTATTATTTGAACTTAGTTGAATGACCTTCAGTCTTGCTATATT
CACATGATAATATTTTGATGTTTATTCTAAATCGAACATCATAAGGATCG
TTTATACGCAAGTGCTGTAAAGATGATGACTTGATTTTAATGGTTAT Run BLAST on NCBI protein sequence of TCONS_00016014-protein >TCONS_00016014-protein ID=TCONS_00016014-protein|Name=TCONS_00016014-protein|organism=Clytia hemisphaerica|type=polypeptide|length=455bp
MKIEEVKSTTKTQRIATHSHVKGLGLNEDGTASAVGSGLVGQENAREACG
VIVELIKAKKMAGRAILLAGPPGTGKTALALAIAQELGPKVPFCPMVGSE
VYSTEVKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPFETENPVGGY
GKSVSHIIIGLKTAKGTKQLKLDPSIYESLQKEKVEPGDVIYIEANSGAV
RRQGRSDAFATEFDLEAEEYVPLPKGDVHKKKEVVQDVTLHDLDIANARP
QGGQDIMSMMGQLMKPKKTEITDKLRKEINKVVNKYIDQGVAELVPGVLF
IDEVHMLDIECFTYLHKALESSLSPIVIFATNRGHCLIRGTDLRSPHGMP
LDLLDRVMIIRTMPYSQKEMMQIIKIRCQTEGIQVDDESLKELGDIGTKT
TLRYAVQCLTPASVLAKINGQESVTVNEIQEVNELFFDAKASAKLLAEQE
SKYMK Run BLAST on NCBI transcript from alignment at sc0000224:366150..374759- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016014 ID=TCONS_00016014|Name=TCONS_00016014|organism=Clytia hemisphaerica|type=transcript|length=8610bp|location=Sequence derived from alignment at sc0000224:366150..374759- (Clytia hemisphaerica)
AAGTACCCCTTTTTTAACCTGACTGAAATTCGAGCCGTTACTAGCAACCC
TGCGGGGCCCAAGGCGCCGAGTATGCACCCGGCACTGTGACAAGCCGTTA
CTAGCAACCCTGCGGGGCCCAAGGCGCCGAGTATGCACCCGGCACAGTGA
CAAGCCGTTACTAGCAACCCTGACCCTAACCCCTAACTGATAATAATCGA
ATCCTGACCCCCGGAAAATTACCACGGACTAGAAAGAACGAAAAAAATTG
AAGGGGCGGAATTGCTGATTGAAACTAGTTTTCACCTGCACAAAACGCGC
GATTCTACTGGATTCTAAGAAGATTGATTCGCATTTCTCGTCGACCACGC
TTTTGTGAAGAAGTTTATTATATACCTTGATTGTGATTGTTGAGACCGCT
CATTTTGTTTAAAGTTTACAACATCTCTTATCTGATTTGGACTCTAGGAA
AGTTTAATTTTCAATAGGTTCTAAAATCAAAGATCATCATGAAGATTGAG
GAAGTCAAAAGCACAACAAAAACTCAAAGAATCGCAACTCACAGTCATGT
CAAAGGTTTAGGATTGAATGAAGATGGAACTGCCTCAGCTGTCGGATCTG
GACTGGTTGGTCAGGAAAATGCAAGAGAGGTAAATAATTCATAGTTCAAA
CTTTTAGTGGAAGTAGTAGAATTTTTTATCTAATCAAAACGTGTTAATTG
AATGAATCAAACGCCGAGAATCAATACACTTTTCCCACTAATGCGCTCGC
ATTACTTTGATACTCTCCACAGTTTGGTCTCTGGAGGTAAACAAACCTGT
TTTTGATTGTGTTTCCTTAGGAAAAGTCGTTTTTTGAGCTTTTCGTAAGT
TCTGTAGATCAAAGTCCCCTCAAATTTTAGTATGTTCAATCTATTCATGT
CATGATATTATAACCACCCTGAATTTTTTTTTGCCAAAGGAAGATCGCTA
TCAAAAGTTAGAAGCTGAAAACCCACTTTCCCCAGTCAGGACCTCATTTC
ACTTTATCGATATTACGCAAACGGCAGTGTGCGCTAAATAATCTTGGTTT
CGCTTTCGATTTCAAGCAAAGGTCTTACCAACAGGGCGCGCGTACATAGA
AACGGGGCTGGGTAGAAAAATCTAAACATAGAATTCAAAAAAAATACCGA
TCATCGTATAGAGCACTAAAAAATACCCCCTTTCTATGTTTAGTTTGTTC
AACCTTGGATTATAACTGAAAATATCTTCAAAAAAACCTTCGTCCGCTAT
CAGCCGCGCGGTAATCTTTGCCTGCTTCAATTCTTAGATAATGAATAAGA
GAGGTGCGCTTAGCTAAGCCGTGCTCGCGGGCGATAAATTTATGTTTACT
TATCTTGTATATTTTAGTGGTATTTATCCAATGAAAAGGATGTTGACAAA
ATATGCACGGGGCTGACAAGATATGCACGGCATTGATTATGACATCATTA
AATATGTCGATGTCGATTCAACGCCCGTTAAAGAAAATAATTCGTAGATA
GTTCCTTTTATCTTGAAATTTAGAAATACGAACAAAAAAAGATCAAATTT
AATATTTGTTTCCTATCTAGATTATATTAGCTTTAGAATACGGTAAATTT
TCACGAAAAATATTTCGCGATGGCGGTACGCCCAATCGCGCCCACGGGAA
AGTTCCAATTTTTAATTATCGGGAAATCGGGGAAACCCGTTCACCACGTG
GATAAAAAACGTACGGAATGAAACCTGACAGAAGGTTTCAACCAGATTCA
TTCAGATAAAGCTATAAGAGGTTCATTACTTGGGGATTTTAAAACCTACA
TAACCAAAAACGAAAGTTGTTGGGAAGGAAAGAGTAAACGCAAGACAAGG
TTTGGTTGTGTTGATCAGGTTTGTTTTTATTCTATCGGAACTAATGTTAA
AAAAGACCAAAGAGGTCCTGACTGACTTTCCCTAACCCCTCGCAGGCAAA
AACGCGTTAGTTTTACTTCCCAAACAATTTCATACACAAGGTGGATTTTC
CCAGGCCACATTCATTTCTGAGAAGTTGGAATTACGGGAAAGGTGTATTG
AACCAGGGGGGGGGTCTTGCAGTTACTCCTTGACACTATGTGGAGTAACT
GCAATTTTGGACATTTTCTACAGACACCACCACCCTTTCAGTTATTCCAT
AGTGTACTAACTGATTTTACCCTCAAAATTGGTGTATACCACCCCCATAT
ATAAATGCCAAATTTGGCAATTTTTTCACTGAATTCCTCATTTTTGATAC
CATTTTACTGGGTACGTCTTATTAACGACCGTTCAAGAGTTAAATATCTC
AATCATTTTCCAAGTTTGTTAAAATATCTTCCATGCCTTGATTGAAGAAA
AATTTTATGATTTTTTTTTACTTTTGTAAAAAATGTTTTGAATTTTTTTG
TTTCCGGAATTTTTAAAAGCCTAAAATTTTAAGTGAAAAATTGAAAAAGT
TGCTCACTTAGTACACCATATCCTACCAAAATCCACAATTTTGGGCTTAG
GCACCACCCATCTTGCAGTTAGTCCACTGGTGGAGTAATTGTTTTCCCAA
ATTTTGGTTTATATATATACCACCACGGTAGTAATTGTCATAGTGTTTAT
ATAATAACTGCATAACCCCCCCTGATTGAACACAAACGGACGTAATCAAA
AAATTGCGATTCAATTGTCGAATACAATGGGCGGTTCCAGTTATAGTCCG
TTACCATCTGTGGACGACATGGATTTCCGTTACAATACACCGTTTAACAG
TCTTGCCATCTCCACCGTAGAGGCGGTTGGTAAAAATTCTCACTTTTAGT
AATGTGGAAGGTTAGAGAAATGTAAACATTGCCATTTGTTTTCTTTCCTT
TAAAAAGAATGTTTTAGATGTTTGAACATGATATTAATGACAATTTTATG
TATCTCTCCTGAAAATTTCACAAAAATTCATCTAGAGGAAAAGAAGTTAT
GATTAAAAGTGAGCTCTTTACCTACCATTTCTCTGCTGGGTTTTCTTATG
ACAACTGGATGTTTAACTACCATTCCTGTGGTTGCCAAAATCAAAACAAT
GGAAAATTGTTCATACGCGTGCGCAGTCGACACTGTTAAACGGTGTATTT
ACTTTTGAAAAACTTCAGGATTTCCGTAACATTCAAGAATTTTTAAGGAA
AAATCTTGGATTTTCCAAAGCTTAGCAAGAAAATAAAGCAAATGTTATGG
ATTTTCTGATACGGATGACCAAATAATAGTTGTTTTGGAGAACACGGTGG
CTTATTGAATAACAAACCAGAATACCCGCGATAGAATTAATGACAGAGAA
CATTGACAACTTGGGAATTCTAGGCCCCTTGAGATTTCGGCCCTAAATTG
GTTTAAACCTATAGACCCTAAATTACGGTAAGCAGTGGCCTAAAGGGTCC
GCGTTGAAAGGGTGCGGATGGATAGCAGAAAGCACAGTGCAATCAAAAAG
AGAATCAAACATTAATCGAACCTATCAAACATTGATCGAACCTATCGAAC
CTTGATTGAACCTATCAAAAATCAATTGAATCACGATGGAACATCAATCG
AACAGTAATCAAACTTTGCCAAAATTTCTTGGTTCAATTTGGTTCGGTAA
TTGCAGGGGGGGTCAAGGTCCAGGATACCAACCCAGGGCCCAAAAACCTG
ACTTTTAGTAGACACCACCACCCCCCTATATTGGTATCAATACCAACTTG
AAAACCCCAATTTTCTAAAAAAGGGGGGGACCCACCCCCCTAAATTGGTA
TCGATACCAACATGAAAATCCTGATATTCTGAAAAAGGGGGAGCCACCCC
CCCCCTAAATTGGTATCGATACGAACTTGAAAATCCCGATTTTTCTGAAA
AAGGGGACCCACCCTAAATTGGCAATCAGTAAAAATGCAAGAAGTTATAT
GCATAGGATACTGCATACAAGGGACGCTAAACAAAATCTTTGGATGTTTT
TATTCAAAGAACATTCCTCTTATTAATCACTTATATTACAGTATATACCA
CACTTTAGACTCCAAGAAAATGAAAACAAGTTTTTCTTATTCTAACACAA
CGTAAATTAAGTTTCTTGAACTAAATTGGCAAAATGTATCAAATTCATAA
AACTAGTTGATAAACTAGACTAGATAAAAAACTCATTGTATTAGGCACGC
CTAGAGTCTTTGATGAACGTTATGTACAGAAAAATTTTATCACGACTAAA
AAAGTTCTAAGATCTGCTAAGACTTGACTCAGTTTGTTCAACTCTAGTTT
TGAATGAATTTTGGTTGATTGAAAGGATTGAGAGCAGCAAAAGTTAAATA
AAAATTTAATTTCAATTATAGAATGAAGAAAGCTTTTATATAGAATCAGG
GTATAGTCTAAACGATTCAAATAAGTTTTTATACTTACATTATACCGGGT
GCCTCAGAAAAATCTTTGGATGTTTGGCGANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAACACGTAATAAAAGGGTATTAAATTAAGC
ATTTTTAAGCGTTTTCGATAAGAATTTTTTTCAAATATTTCTAAAAACTG
ACTATTTACTAAAAACTGACGATGTATTAAACGAAAACTGCTTTTAAAAG
TATTTTAACAATTAATTATGTCGTAAAAGTCGTTAAATAAGTCAAATACT
GAGCTATTTTTTCATTATTTGCATAAATTTAATACACCTTTTTTTACGTA
TTTTTTACACTTTTCGAAAAGTGAATTTTGACTTCAAAAGCTTATAACTT
GACAACTACTTGACCAAACTTAAAAAGTTACACCGCAAAATTTAAGTTAG
CATGTCCTCTTTCTAATAAAAGTGGTTTTGAGTCTAAACAAGACTTTGTT
CGGCCTCAGTGGCTCGCCAAACGTCCAAAGTTTTTTCTGAGGCACCCGGT
ACAACATTTTAAGTCAGATACCAATTTCAAATTCAGCAAAAATTAAAAAA
GGGGGACCCACCCCCTCATTTTGGTATCGATACCAACTTGACTTTTTGAA
ATTTGAAAAAAAAATTTGACACCACCCCCCGGCCCTGGGTTTGGTATCTG
GATCCTGACCCCAATCGAATACTTATCGTTCGATTAAGTTTGATTAAGTT
CAATTAGTTCGGTAATCAAACAGTTCGATTGATATCGCCTGGTTTGATTT
TAGCAACCGTGGGAAACTTCACTCTCCCCCGTAAAAAAAATTTTCTGATC
CCCCTTCTTCAACTTTTCGGAAGTTGTCATCCCCCCTTAAGAAAGGGAGG
TGGACGAACTATGATTGTGGAGATAGCGAGACTCCTAAACAGTGTATTAC
TCCACATACATTACTTTTCCTCAGCGAATGAAAAGGTGATAAATTATCTT
GTCTCTAGGTAACTGTTGTGGAGTAATTCAGTTATTCAATAGGCCGTCGT
GTTCTCCAAAACAACTATTCAAGATATGATTAATTGAACTTCGAAACGTT
CGAAATTGAATCGAACCTAAGTTTGGTTTTCAAACTCTAATCGAATACTC
ACAAATTCTTTAAAATATACAGTTCAATTAAAGAAATCAAACTTAATCGA
ACTTTGACAAAAACCGTTCTCTACTGCTCTAGGTTCCAGTGAGCCGGGCG
CTAAAAACAATCGGCTATCTAAATTTTGATTGATCCTTGAAGAGAGATTA
CGTAATCGGCGTTAAATTTTCTCCGCCTAAAAGTGGAAAATGAAGGCCAT
TATTTTCAGAGTGCTCTCTGCAATCTTATCTAATGAAGTATAGGCCAGAA
TGGGTCAAGGGCTAGAAGAAAATCTTAAAACTTTCTTATGCTAATATGTA
CTTATGCACTCGCTCTTATCTGATTTTCTGATGTCCACGCTTATTAAGAT
CCAAAGGAGTTGGCCAATTTGATTTAAAATTGTAATCAAACTTAACTTCG
AACATAATCGTAATCAAACATAATCCAAGCTCATTGACAATAAATGTAAT
TGACAATAAATTGAATCGATCAAACGTTATTCGAATGCAATTGAACATAA
CCAGAATATTACCCAGGAATCGGTCGTTCGATTGAGATTCGATTACATTT
GACAATCAAATTGCAATTATCAGCTTGGGAAATGCCGTGTGTTTCCATTT
CAAGAAATGATGCTCAAGTCAAAGGATTCTTTGAAAAAATAACGCTCACA
TCAAATTCCTGCTTTCGTTTGATAACTAAAGATGAGAAAAAATTTAACCC
TCAAAACTAACAATTAAAACAAATAAAGTTATATAACTTGACTCAAGTTT
CCACTTTACCTAGAGTAAGATTTAATATTGAAAACTAGTATTTTTCAAAA
TTTCTTTTTTATCAGGCATGTGGTGTTATAGTGGAGCTGATCAAAGCAAA
GAAGATGGCAGGCAGAGCTATTTTACTTGCTGGACCACCTGGGACAGGTA
TTAATCATTTCTTTCCTGATTTTATTTCTTGATTTTAATCTTTTATTAAT
AAACACTCTCAGGCTGGACTGAAAATGGAGAAATTTTGGTTTGTCGTCTT
AAGATAGAAGCTTGAGATCGACATAATAAAGGTTATGATTTGAAGAAAAG
AAATTCTTATTTAAAATGGCAATACATTTTTTATTAGTCCAGCTTTAACC
TAGGAAAAAACAAAAAATGATAAGATGATGCTCAAATACCCTATTTTAAA
AGGAAAAATATAGTGTGATTTGAGAGAAAGCCTCTAACATTATTCAAAGG
GAACAACATGCCTTATCTGAGTATTTCTTATGAATTTGTTTTGATATAAA
AACTTCTTTTTTCCTTCTAAAAAGGCAAAACTGCTTTGGCACTTGCTATT
GCTCAGGAACTGGGACCAAAAGTTCCTTTCTGCCCCATGGTTGGCAGTGA
GGTTTATTCTACTGAAGTCAAGAAAACTGAAGTGCTGATGGAGAACTTCA
GAAGAGCCATTGGATTGAGAATCAAGGAAACCAAGGAGGTATATGAAGGA
GAAGTCACAGAGTTGACTCCATTTGAAACAGAGAATCCAGTTGGGGGTTA
TGGAAAGAGTGTCAGTCACATTATTATCGGTTTGAAAACTGCAAAAGGTA
CCAAACAGTTAAAACTGGATCCTTCCATTTACGAGAGTTTACAGAAAGAA
AAGGTCGAACCGGGAGATGTTATTTACATTGAAGCTAACAGTGGAGCTGT
GAGACGCCAAGGTCGCTCGGATGCTTTTGCTACTGAATTTGACTTAGAAG
CTGAGGAATATGTCCCTTTACCAAAGGGCGATGTCCACAAGAAGAAAGAG
GTTGTCCAGGATGTCACCCTGCATGATTTGGATATTGCCAACGCTAGACC
CCAAGGTGGACAGGACATAATGTCTATGATGGGTCAGCTGATGAAGCCAA
AGAAAACTGAGATCACTGATAAACTACGGAAAGAAATAAACAAGGTGGTC
AACAAATATATTGACCAAGGTGTAGCTGAGTTGGTTCCTGGTGTTTTGTT
TATTGATGAAGTTCACATGTTAGATATTGAGTGTTTCACATACCTACATA
AAGCTTTAGAATCCTCTTTATCACCTATTGTCATATTCGCAACCAACAGA
GGTCATTGCCTTATTAGGGGCACTGATCTACGGTCTCCACACGGTATGCC
TTTGGATTTGCTAGATCGTGTTATGATTATCCGTACTATGCCTTATTCCC
AAAAAGAAATGATGCAAATCATCAAAATCAGATGCCAGACAGAAGGAATC
CAAGTTGACGATGAATCCTTAAAAGAGCTTGGCGATATCGGTACCAAAAC
CACACTCCGGTATGCAGTCCAATGTCTAACACCTGCCTCTGTGTTGGCCA
AAATCAATGGTCAAGAGAGCGTCACCGTAAATGAGATTCAAGAAGTCAAT
GAACTTTTCTTTGACGCGAAAGCTTCTGCGAAACTATTAGCTGAACAGGA
AAGCAAGTACATGAAATAACGTTTGTTTCTGCATTGGGAACCTTATTGCT
GGAGGTGGTTAAGTGTGTTTTTGGGGCTTCGATTCTTGACCAACAAATCT
TATTTTGACATGACAGTGAAAAGGGCTTTTCTAAAGTCACAGAATGAACA
TAAAATGATACTATGGTAGTGTAAATATTTTTTAAGATTTATATTTTTCA
TTTATTTCCCATTAGTTTTTTTATCTGTTGAAATATTTAGAGGTTTCGAA
AATTGTTATAGTACGTGAAAATGGATATGATGGATATGAATAAACATCTT
GTGTAGCGTTTTCAGGTCTGTATTATTTGAACTTAGTTGAATGACCTTCA
GTCTTGCTATATTCACATGATAATATTTTGATGTTTATTCTAAATCGAAC
ATCATAAGGATCGTTTATACGCAAGTGCTGTAAAGATGATGACTTGATTT
TAATGGTTAT Coding sequence (CDS) from alignment at sc0000224:366150..374759- >TCONS_00016014 ID=TCONS_00016014|Name=TCONS_00016014|organism=Clytia hemisphaerica|type=CDS|length=4104bp|location=Sequence derived from alignment at sc0000224:366150..374759- (Clytia hemisphaerica)
GCAAAACTGCTTTGGCACTTGCTATTGCTCAGGAACTGGGACCAAAAGTT
CCTTTCTGCCCCATGGTTGGCAGTGAGGTTTATTCTACTGAAGTCAAGAA
AACTGAAGTGCTGATGGAGAACTTCAGAAGAGCCATTGGATTGAGAATCA
AGGAAACCAAGGAGGTATATGAAGGAGAAGTCACAGAGTTGACTCCATTT
GAAACAGAGAATCCAGTTGGGGGTTATGGAAAGAGTGTCAGTCACATTAT
TATCGGTTTGAAAACTGCAAAAGGTACCAAACAGTTAAAACTGGATCCTT
CCATTTACGAGAGTTTACAGAAAGAAAAGGTCGAACCGGGAGATGTTATT
TACATTGAAGCTAACAGTGGAGCTGTGAGACGCCAAGGTCGCTCGGATGC
TTTTGCTACTGAATTTGACTTAGAAGCTGAGGAATATGTCCCTTTACCAA
AGGGCGATGTCCACAAGAAGAAAGAGGTTGTCCAGGATGTCACCCTGCAT
GATTTGGATATTGCCAACGCTAGACCCCAAGGTGGACAGGACATAATGTC
TATGATGGGTCAGCTGATGAAGCCAAAGAAAACTGAGATCACTGATAAAC
TACGGAAAGAAATAAACAAGGTGGTCAACAAATATATTGACCAAGGTGTA
GCTGAGTTGGTTCCTGGTGTTTTGTTTATTGATGAAGTTCACATGTTAGA
TATTGAGTGTTTCACATACCTACATAAAGCTTTAGAATCCTCTTTATCAC
CTATTGTCATATTCGCAACCAACAGAGGTCATTGCCTTATTAGGGGCACT
GATCTACGGTCTCCACACGGTATGCCTTTGGATTTGCTAGATCGTGTTAT
GATTATCCGTACTATGCCTTATTCCCAAAAAGAAATGATGCAAATCATCA
AAATCAGATGCCAGACAGAAGGAATCCAAGTTGACGATGAATCCTTAAAA
GAGCTTGGCGATATCGGTACCAAAACCACACTCCGGTATGCAGTCCAATG
TCTAACACCTGCCTCTGTGTTGGCCAAAATCAATGGTCAAGAGAGCGTCA
CCGTAAATGAGATTCAAGAAGTCAATGAACTTTTCTTTGACGCGAAAGCT
TCTGCGAAACTATTAGCTGAACAGGAAAGCAAGTACATGAAATAAGCATG
TGGTGTTATAGTGGAGCTGATCAAAGCAAAGAAGATGGCAGGCAGAGCTA
TTTTACTTGCTGGACCACCTGGGACAGATGAAGATTGAGGAAGTCAAAAG
CACAACAAAAACTCAAAGAATCGCAACTCACAGTCATGTCAAAGGTTTAG
GATTGAATGAAGATGGAACTGCCTCAGCTGTCGGATCTGGACTGGTTGGT
CAGGAAAATGCAAGAGAGGCAAAACTGCTTTGGCACTTGCTATTGCTCAG
GAACTGGGACCAAAAGTTCCTTTCTGCCCCATGGTTGGCAGTGAGGTTTA
TTCTACTGAAGTCAAGAAAACTGAAGTGCTGATGGAGAACTTCAGAAGAG
CCATTGGATTGAGAATCAAGGAAACCAAGGAGGTATATGAAGGAGAAGTC
ACAGAGTTGACTCCATTTGAAACAGAGAATCCAGTTGGGGGTTATGGAAA
GAGTGTCAGTCACATTATTATCGGTTTGAAAACTGCAAAAGGTACCAAAC
AGTTAAAACTGGATCCTTCCATTTACGAGAGTTTACAGAAAGAAAAGGTC
GAACCGGGAGATGTTATTTACATTGAAGCTAACAGTGGAGCTGTGAGACG
CCAAGGTCGCTCGGATGCTTTTGCTACTGAATTTGACTTAGAAGCTGAGG
AATATGTCCCTTTACCAAAGGGCGATGTCCACAAGAAGAAAGAGGTTGTC
CAGGATGTCACCCTGCATGATTTGGATATTGCCAACGCTAGACCCCAAGG
TGGACAGGACATAATGTCTATGATGGGTCAGCTGATGAAGCCAAAGAAAA
CTGAGATCACTGATAAACTACGGAAAGAAATAAACAAGGTGGTCAACAAA
TATATTGACCAAGGTGTAGCTGAGTTGGTTCCTGGTGTTTTGTTTATTGA
TGAAGTTCACATGTTAGATATTGAGTGTTTCACATACCTACATAAAGCTT
TAGAATCCTCTTTATCACCTATTGTCATATTCGCAACCAACAGAGGTCAT
TGCCTTATTAGGGGCACTGATCTACGGTCTCCACACGGTATGCCTTTGGA
TTTGCTAGATCGTGTTATGATTATCCGTACTATGCCTTATTCCCAAAAAG
AAATGATGCAAATCATCAAAATCAGATGCCAGACAGAAGGAATCCAAGTT
GACGATGAATCCTTAAAAGAGCTTGGCGATATCGGTACCAAAACCACACT
CCGGTATGCAGTCCAATGTCTAACACCTGCCTCTGTGTTGGCCAAAATCA
ATGGTCAAGAGAGCGTCACCGTAAATGAGATTCAAGAAGTCAATGAACTT
TTCTTTGACGCGAAAGCTTCTGCGAAACTATTAGCTGAACAGGAAAGCAA
GTACATGAAATAAGCATGTGGTGTTATAGTGGAGCTGATCAAAGCAAAGA
AGATGGCAGGCAGAGCTATTTTACTTGCTGGACCACCTGGGACAGATGAA
GATTGAGGAAGTCAAAAGCACAACAAAAACTCAAAGAATCGCAACTCACA
GTCATGTCAAAGGTTTAGGATTGAATGAAGATGGAACTGCCTCAGCTGTC
GGATCTGGACTGGTTGGTCAGGAAAATGCAAGAGAGGCAAAACTGCTTTG
GCACTTGCTATTGCTCAGGAACTGGGACCAAAAGTTCCTTTCTGCCCCAT
GGTTGGCAGTGAGGTTTATTCTACTGAAGTCAAGAAAACTGAAGTGCTGA
TGGAGAACTTCAGAAGAGCCATTGGATTGAGAATCAAGGAAACCAAGGAG
GTATATGAAGGAGAAGTCACAGAGTTGACTCCATTTGAAACAGAGAATCC
AGTTGGGGGTTATGGAAAGAGTGTCAGTCACATTATTATCGGTTTGAAAA
CTGCAAAAGGTACCAAACAGTTAAAACTGGATCCTTCCATTTACGAGAGT
TTACAGAAAGAAAAGGTCGAACCGGGAGATGTTATTTACATTGAAGCTAA
CAGTGGAGCTGTGAGACGCCAAGGTCGCTCGGATGCTTTTGCTACTGAAT
TTGACTTAGAAGCTGAGGAATATGTCCCTTTACCAAAGGGCGATGTCCAC
AAGAAGAAAGAGGTTGTCCAGGATGTCACCCTGCATGATTTGGATATTGC
CAACGCTAGACCCCAAGGTGGACAGGACATAATGTCTATGATGGGTCAGC
TGATGAAGCCAAAGAAAACTGAGATCACTGATAAACTACGGAAAGAAATA
AACAAGGTGGTCAACAAATATATTGACCAAGGTGTAGCTGAGTTGGTTCC
TGGTGTTTTGTTTATTGATGAAGTTCACATGTTAGATATTGAGTGTTTCA
CATACCTACATAAAGCTTTAGAATCCTCTTTATCACCTATTGTCATATTC
GCAACCAACAGAGGTCATTGCCTTATTAGGGGCACTGATCTACGGTCTCC
ACACGGTATGCCTTTGGATTTGCTAGATCGTGTTATGATTATCCGTACTA
TGCCTTATTCCCAAAAAGAAATGATGCAAATCATCAAAATCAGATGCCAG
ACAGAAGGAATCCAAGTTGACGATGAATCCTTAAAAGAGCTTGGCGATAT
CGGTACCAAAACCACACTCCGGTATGCAGTCCAATGTCTAACACCTGCCT
CTGTGTTGGCCAAAATCAATGGTCAAGAGAGCGTCACCGTAAATGAGATT
CAAGAAGTCAATGAACTTTTCTTTGACGCGAAAGCTTCTGCGAAACTATT
AGCTGAACAGGAAAGCAAGTACATGAAATAAGCATGTGGTGTTATAGTGG
AGCTGATCAAAGCAAAGAAGATGGCAGGCAGAGCTATTTTACTTGCTGGA
CCACCTGGGACAGATGAAGATTGAGGAAGTCAAAAGCACAACAAAAACTC
AAAGAATCGCAACTCACAGTCATGTCAAAGGTTTAGGATTGAATGAAGAT
GGAACTGCCTCAGCTGTCGGATCTGGACTGGTTGGTCAGGAAAATGCAAG
AGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016014-exon-sc0000224-1575043694:374131..374759 | TCONS_00016014-exon-sc0000224-1575043694:374131..374759 | Clytia hemisphaerica | exon |
| TCONS_00016014-exon-sc0000224-1575043694:368113..368194 | TCONS_00016014-exon-sc0000224-1575043694:368113..368194 | Clytia hemisphaerica | exon |
| TCONS_00016014-exon-sc0000224-1575043694:366150..367735 | TCONS_00016014-exon-sc0000224-1575043694:366150..367735 | Clytia hemisphaerica | exon |
| TCONS_00016014-exon-sc0000224-1510915933:374131..374759 | TCONS_00016014-exon-sc0000224-1510915933:374131..374759 | Clytia hemisphaerica | exon |
| TCONS_00016014-exon-sc0000224-1510915933:368113..368194 | TCONS_00016014-exon-sc0000224-1510915933:368113..368194 | Clytia hemisphaerica | exon |
| TCONS_00016014-exon-sc0000224-1510915933:366150..367735 | TCONS_00016014-exon-sc0000224-1510915933:366150..367735 | Clytia hemisphaerica | exon |
| TCONS_00016014-exon-sc0000224-1491911889:374131..374759 | TCONS_00016014-exon-sc0000224-1491911889:374131..374759 | Clytia hemisphaerica | exon |
| TCONS_00016014-exon-sc0000224-1491911889:368113..368194 | TCONS_00016014-exon-sc0000224-1491911889:368113..368194 | Clytia hemisphaerica | exon |
| TCONS_00016014-exon-sc0000224-1491911889:366150..367735 | TCONS_00016014-exon-sc0000224-1491911889:366150..367735 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000224 | supercontig | sc0000224:366150..374759 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003678 | DNA helicase activity |
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0003678 |
DNA helicase activity |
Blast
BLAST of TCONS_00016014 vs. Swiss-Prot (Human)
Match: RUVB1 (RuvB-like 1 OS=Homo sapiens GN=RUVBL1 PE=1 SV=1) HSP 1 Score: 800.045 bits (2065), Expect = 0.000e+0 Identity = 380/456 (83.33%), Postives = 428/456 (93.86%), Query Frame = 3
Query: 489 MKIEEVKSTTKTQRIATHSHVKGLGLNEDGTASAVGSGLVGQENAREACGVIVELIKAKKMAGRAILLAGPPGTGKTALALAIAQELGPKVPFCPMVGSEVYSTEVKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPFETENPVGGYGKSVSHIIIGLKTAKGTKQLKLDPSIYESLQKEKVEPGDVIYIEANSGAVRRQGRSDAFATEFDLEAEEYVPLPKGDVHKKKEVVQDVTLHDLDIANARPQGGQDIMSMMGQLMKPKKTEITDKLRKEINKVVNKYIDQGVAELVPGVLFIDEVHMLDIECFTYLHKALESSLSPIVIFATNRGHCLIRGT-DLRSPHGMPLDLLDRVMIIRTMPYSQKEMMQIIKIRCQTEGIQVDDESLKELGDIGTKTTLRYAVQCLTPASVLAKINGQESVTVNEIQEVNELFFDAKASAKLLAEQESKYMK 1853
MKIEEVKSTTKTQRIA+HSHVKGLGL+E G A SGLVGQENAREACGVIVELIK+KKMAGRA+LLAGPPGTGKTALALAIAQELG KVPFCPMVGSEVYSTE+KKTEVLMENFRRAIGLRIKETKEVYEGEVTELTP ETENP+GGYGK++SH+IIGLKTAKGTKQLKLDPSI+ESLQKE+VE GDVIYIEANSGAV+RQGR D +ATEFDLEAEEYVPLPKGDVHKKKE++QDVTLHDLD+ANARPQGGQDI+SMMGQLMKPKKTEITDKLR EINKVVNKYIDQG+AELVPGVLF+DEVHMLDIECFTYLH+ALESS++PIVIFA+NRG+C+IRGT D+ SPHG+PLDLLDRVMIIRTM Y+ +EM QIIKIR QTEGI + +E+L LG+IGTKTTLRY+VQ LTPA++LAKING++S+ ++E++ELF+DAK+SAK+LA+Q+ KYMK
Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 456
The following BLAST results are available for this feature:
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